RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 TMEM184CQ9NVA4 438 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 ATAD3AQ9NVI7 634 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 EXO1Q9UQ84 846 aaKnown RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 PADI2Q9Y2J8 665 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 INSL6Q9Y581 213 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 PMF1-BGLAPU3KQ54 211 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 QSOX1O00391 747 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 DPM1O60762 260 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 OPN1SWP03999 348 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 LCKP06239 509 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 PTPN2P17706 415 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 TNFRSF1BP20333 461 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 PCGF2P35227 344 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 PRLHRP49683 370 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF852Q6ZMS4 543 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 KLHDC8AQ8IYD2 350 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 SPPL2AQ8TCT8 520 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 DYNC2LI1Q8TCX1 351 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 DNASE1L2Q92874 299 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 RPL3LQ92901 407 aaKnown RBP13.83□□□□□ -0.2
HIF3A-202ENST00000244303 GLYATL1Q969I3 302 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 HRASLS5Q96KN8 279 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 ALPK1Q96QP1 1244 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 SIGLEC11Q96RL6 698 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 CCM2Q9BSQ5 444 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 GABARAPL3Q9BY60 117 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF282Q9UDV7 671 aaPredicted RBP13.83□□□□□ -0.2
HIF3A-202ENST00000244303 TESMINQ9Y4I5 508 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 PCDHGB3Q9Y5G1 929 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 CCDC88CQ9P219 2028 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 VIPP01282 170 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 FGBP02675 491 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 DDX6P26196 483 aaKnown RBP eCLIP13.83□□□□□ -0.2
HIF3A-202ENST00000244303 TGFBR1P36897 503 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 CRATP43155 626 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 SELENOWP63302 87 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 PCDH1Q08174 1060 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 TMEM115Q12893 351 aaPredicted RBP13.83□□□□□ -0.2
HIF3A-202ENST00000244303 ARHGAP15Q53QZ3 475 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 COX20Q5RI15 118 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 ADCK1Q86TW2 530 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 SNX29P2Q8IUI4 249 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 C11orf65Q8NCR3 313 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 OR4K1Q8NGD4 311 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 IPCEF1Q8WWN9 437 aaPredicted RBP13.83□□□□□ -0.2
HIF3A-202ENST00000244303 S100ZQ8WXG8 99 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 ITPKCQ96DU7 683 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 SPHK2Q9NRA0 654 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 GPATCH2Q9NW75 528 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 RNF6Q9Y252 685 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 LYVE1Q9Y5Y7 322 aa13.83□□□□□ -0.2
HIF3A-202ENST00000244303 OR2A25A4D2G3 310 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 RNASET2O00584 256 aaKnown RBP13.82□□□□□ -0.2
HIF3A-202ENST00000244303 MRPS14O60783 128 aaKnown RBP13.82□□□□□ -0.2
HIF3A-202ENST00000244303 FGF19O95750 216 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 GBAP04062 536 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 RHOP08100 348 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 ETFAP13804 333 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 POLR2EP19388 210 aaKnown RBP13.82□□□□□ -0.2
HIF3A-202ENST00000244303 XPAP23025 273 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-202ENST00000244303 TGFBR2P37173 567 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 MVDP53602 400 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 HBA1P69905 142 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 TSTA3Q13630 321 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-202ENST00000244303 TEAD4Q15561 434 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 PAGE2BQ5JRK9 111 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 PERM1Q5SV97 790 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 CATSPEREQ5SY80 951 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 MED27Q6P2C8 311 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 TMEM220Q6QAJ8 160 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 SLCO4C1Q6ZQN7 724 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 TECPR1Q7Z6L1 1165 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 LMNTD1Q8N9Z9 388 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 MRGPRX3Q96LB0 322 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 FOPNLQ96NB1 174 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 BTBD2Q9BX70 525 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 NDUFAF4Q9P032 175 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 CXXC1Q9P0U4 656 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-202ENST00000244303 NFKBIL1Q9UBC1 381 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-202ENST00000244303 MAPRE3Q9UPY8 281 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 SH2B3Q9UQQ2 575 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 KCNE2Q9Y6J6 123 aa13.82□□□□□ -0.2
HIF3A-202ENST00000244303 KRBA1A5PL33 1030 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 TNFRSF11BO00300 401 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 BMP4P12644 408 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 HLA-EP13747 358 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 CD36P16671 472 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF8P17098 575 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-202ENST00000244303 SERPINB10P48595 397 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 TBPL1P62380 186 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 LY6G5CQ5SRR4 150 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 LINC00299Q6ZSB3 139 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 P3H2Q8IVL5 708 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF480Q8WV37 535 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 AP2M1Q96CW1 435 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 LGALS12Q96DT0 336 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 VPS35Q96QK1 796 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 FEVQ99581 238 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 FBXO8Q9NRD0 319 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 IL36AQ9UHA7 158 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms