RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PPFIBP2Q8ND30 876 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 MDS2Q8NDY4 140 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 OR9A4Q8NGU2 314 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 RERGQ96A58 199 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-201ENST00000242776 FRMD6Q96NE9 622 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 CYTH2Q99418 400 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 NPAS2Q99743 824 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 FUT8Q9BYC5 575 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 VN1R1Q9GZP7 353 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 DRC3Q9H069 523 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 ACSS3Q9H6R3 686 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 PLAC1Q9HBJ0 212 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 ENAMQ9NRM1 1142 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 IARS2Q9NSE4 1012 aaKnown RBP13.01□□□□□ -0.33
DDX39A-201ENST00000242776 HCN3Q9P1Z3 774 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 TXNDC16Q9P2K2 825 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 PRRC2AP48634 2157 aaKnown RBP13.01□□□□□ -0.33
DDX39A-201ENST00000242776 A0A1W2PQ72 361 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 FAM159BA6NKW6 160 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 GOLGA8KD6RF30 607 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 GOLGA8TH3BQL2 631 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 FKBP9O95302 570 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 CD99P14209 185 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 CD46P15529 392 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 H2AFXP16104 143 aaPredicted RBP13□□□□□ -0.33
DDX39A-201ENST00000242776 HSD17B3P37058 310 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 SLC29A2Q14542 456 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 TRMT10BQ6PF06 316 aaKnown RBP13□□□□□ -0.33
DDX39A-201ENST00000242776 KIAA0408Q6ZU52 694 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 OTOAQ7RTW8 1153 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 PRSS41Q7RTY9 318 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 SLC26A11Q86WA9 606 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 CILP2Q8IUL8 1156 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 CNTN4Q8IWV2 1026 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 CTAGE3PQ8IX95 158 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 FOPNLQ96NB1 174 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 TCF12Q99081 682 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 MACROD1Q9BQ69 325 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 PLCD4Q9BRC7 762 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 RBCK1Q9BYM8 510 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 UCK2Q9BZX2 261 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 TGIF2Q9GZN2 237 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 PPCSQ9HAB8 311 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 INTS10Q9NVR2 710 aaKnown RBP13□□□□□ -0.33
DDX39A-201ENST00000242776 COQ3Q9NZJ6 369 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 TAC3Q9UHF0 121 aa13□□□□□ -0.33
DDX39A-201ENST00000242776 IGKV1-8A0A0C4DH67 115 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 EXOC1LA0A1B0GW35 172 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 GABRR3A8MPY1 467 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 PRRG2O14669 202 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 ADAM10O14672 748 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 PRMT5O14744 637 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-201ENST00000242776 NDUFS3O75489 264 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 TSPAN12O95859 305 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 HOXB4P17483 251 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-201ENST00000242776 PTGER1P34995 402 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 RFC3P40938 356 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 SLC1A2P43004 574 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 EIF3BP55884 814 aaKnown RBP12.99□□□□□ -0.33
DDX39A-201ENST00000242776 MEP1AQ16819 746 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 TYSND1Q2T9J0 566 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 KBTBD12Q3ZCT8 623 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 BEND6Q5SZJ8 279 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-201ENST00000242776 TEDDM1Q5T9Z0 273 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 FGD2Q7Z6J4 655 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 GALNT7Q86SF2 657 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 PAQR7Q86WK9 346 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 SPNS2Q8IVW8 549 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 CNPY4Q8N129 248 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 GHDCQ8N2G8 530 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 CPSF7Q8N684 471 aaKnown RBP12.99□□□□□ -0.33
DDX39A-201ENST00000242776 TMEM178AQ8NBL3 297 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 C2CD4AQ8NCU7 369 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-201ENST00000242776 MVB12AQ96EY5 273 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 SCMH1Q96GD3 660 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 DMRTA2Q96SC8 542 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 KLK4Q9Y5K2 254 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 IKBKGQ9Y6K9 419 aa12.99□□□□□ -0.33
DDX39A-201ENST00000242776 HAT1O14929 419 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 CDC40O60508 579 aaKnown RBP eCLIP12.98□□□□□ -0.33
DDX39A-201ENST00000242776 TPOP07202 933 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 SP1P08047 785 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 AVPR1BP47901 424 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 IFFO1Q0D2I5 559 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 UAP1Q16222 522 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-201ENST00000242776 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.98□□□□□ -0.33
DDX39A-201ENST00000242776 RNFT1Q5M7Z0 435 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 PLAG1Q6DJT9 500 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 TAOK1Q7L7X3 1001 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 ANKRD37Q7Z713 158 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 LRRC6Q86X45 466 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 SIAH3Q8IW03 269 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 PPM1NQ8N819 430 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 FAM98AQ8NCA5 519 aaKnown RBP12.98□□□□□ -0.33
DDX39A-201ENST00000242776 UHMK1Q8TAS1 419 aaKnown RBP12.98□□□□□ -0.33
DDX39A-201ENST00000242776 PANX3Q96QZ0 392 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 OR2A5Q96R48 311 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 CPNE1Q99829 537 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 EPB41L4BQ9H329 900 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 CDCP1Q9H5V8 836 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms