RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 FAM149AA5PLN7 773 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 YKT6O15498 198 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 CLEC3AO75596 197 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 KCNH1O95259 989 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 PSMG1O95456 288 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 PGRP06401 933 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 THEGLP0DJG4 465 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 SDC1P18827 310 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 RPL10P27635 214 aaKnown RBP12.65□□□□□ -0.38
SLIRP-201ENST00000238688 TIA1P31483 386 aaKnown RBP eCLIP12.65□□□□□ -0.38
SLIRP-201ENST00000238688 AHRP35869 848 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 HPCAL1P37235 193 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 TSFMP43897 325 aaKnown RBP12.65□□□□□ -0.38
SLIRP-201ENST00000238688 ARRB1P49407 418 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-201ENST00000238688 PWP1Q13610 501 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 NFYCQ13952 458 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 VPS26BQ4G0F5 336 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 TMEM35AQ53FP2 167 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 SGO1Q5FBB7 561 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 RIMKLAQ8IXN7 391 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 SRFBP1Q8NEF9 429 aaKnown RBP12.65□□□□□ -0.38
SLIRP-201ENST00000238688 VPS37AQ8NEZ2 397 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 OR8J2Q8NGG1 315 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 ATAD3AQ9NVI7 634 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 MAP10Q9P2G4 905 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 GIMAP2Q9UG22 337 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 CD300AQ9UGN4 299 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 SNX7Q9UNH6 387 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 WDR37Q9Y2I8 494 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 KLK4Q9Y5K2 254 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 GMEB1Q9Y692 573 aa12.65□□□□□ -0.38
SLIRP-201ENST00000238688 KIF26BQ2KJY2 2108 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 A0A1W2PPV9 198 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 ANKDD1BA6NHY2 528 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 MAGEB17A8MXT2 336 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 FXYD1O00168 92 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 PRICKLE3O43900 615 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-201ENST00000238688 SDC3O75056 442 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 ENTPD5O75356 428 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 LDOC1O95751 146 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-201ENST00000238688 CDH1P12830 882 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 SLC6A2P23975 617 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 CMPK1P30085 196 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 S100A3P33764 101 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 ACTR1BP42025 376 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 TRPC1P48995 793 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 ACTR1AP61163 376 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 TRA2BP62995 288 aaKnown RBP12.64□□□□□ -0.39
SLIRP-201ENST00000238688 ZNF763Q0D2J5 394 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 FLOT2Q14254 428 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 CLCA4Q14CN2 919 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 FXNQ16595 210 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 MAPKAPK3Q16644 382 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 PROX2Q3B8N5 592 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 INAVAQ3KP66 663 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 TIGD2Q4W5G0 525 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 MTX3Q5HYI7 312 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 TPRG1LQ5T0D9 272 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 ANXA8L1Q5VT79 327 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 DHDDSQ86SQ9 333 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 RETREG3Q86VR2 466 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 PHACTR4Q8IZ21 702 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 METTL4Q8N3J2 472 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 LMNTD1Q8N9Z9 388 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 PPFIBP2Q8ND30 876 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 OR52E1Q8NGJ3 308 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 LCN9Q8WX39 176 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 ZUFSPQ96AP4 578 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 THAP11Q96EK4 314 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 DUS3LQ96G46 650 aaKnown RBP12.64□□□□□ -0.39
SLIRP-201ENST00000238688 ITCHQ96J02 903 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 TMEM74Q96NL1 305 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 VCX3BQ9H321 246 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 UCK1Q9HA47 277 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 UCKL1Q9NWZ5 548 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 ADA2Q9NZK5 511 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 TAC3Q9UHF0 121 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 MCM8Q9UJA3 840 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 L3MBTL1Q9Y468 752 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 PCDHGA1Q9Y5H4 931 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 AP1M2Q9Y6Q5 423 aa12.64□□□□□ -0.39
SLIRP-201ENST00000238688 A0A096LPI6 279 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 TRABD2BA6NFA1 517 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 TBX19O60806 448 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 PCNAP12004 261 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 PPIBP23284 216 aaKnown RBP12.63□□□□□ -0.39
SLIRP-201ENST00000238688 IL12AP29459 219 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 KIR3DL1P43629 444 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 CEACAM7Q14002 265 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 PTGR1Q14914 329 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 FAM174BQ3ZCQ3 159 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 CCDC157Q569K6 752 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 LRIF1Q5T3J3 769 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 IYDQ6PHW0 289 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 GPR180Q86V85 440 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 AMIGO1Q86WK6 493 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 PTRH1Q86Y79 214 aaKnown RBP12.63□□□□□ -0.39
SLIRP-201ENST00000238688 HPS6Q86YV9 775 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 GALNT15Q8N3T1 639 aa12.63□□□□□ -0.39
SLIRP-201ENST00000238688 TRPV3Q8NET8 790 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms