RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 OR4Q3Q8NH05 313 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 CNOT9Q92600 299 aaKnown RBP12.46□□□□□ -0.41
VAMP4-201ENST00000236192 PKMYT1Q99640 499 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF251Q9BRH9 671 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 MROH6A6NGR9 719 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ERVH48-1M5A8F1 160 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 VNN1O95497 513 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 HOXB1P14653 301 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ITGB6P18564 788 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 TTPAP49638 278 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 NCBP2-AS2Q69YL0 99 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ZFAND4Q86XD8 727 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 OR4F6Q8NGB9 312 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 SNIP1Q8TAD8 396 aaKnown RBP12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF408Q9H9D4 720 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 TCF7L1Q9HCS4 588 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 FAM86C1Q9NVL1 165 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 OR6C2Q9NZP2 312 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 REV1Q9UBZ9 1251 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 SARDHQ9UL12 918 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 RFXAPO00287 272 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 GOT2P00505 430 aaKnown RBP12.46□□□□□ -0.42
VAMP4-201ENST00000236192 NFYAP23511 347 aaPredicted RBP12.46□□□□□ -0.42
VAMP4-201ENST00000236192 NR0B1P51843 470 aaKnown RBP12.46□□□□□ -0.42
VAMP4-201ENST00000236192 SLC25A52Q3SY17 297 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 PARP15Q460N3 678 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 LCLAT1Q6UWP7 414 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF704Q6ZNC4 412 aaPredicted RBP12.46□□□□□ -0.42
VAMP4-201ENST00000236192 WDR53Q7Z5U6 358 aaPredicted RBP12.46□□□□□ -0.42
VAMP4-201ENST00000236192 SCN4BQ8IWT1 228 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 GTPBP8Q8N3Z3 284 aaPredicted RBP12.46□□□□□ -0.42
VAMP4-201ENST00000236192 AQP11Q8NBQ7 271 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 HJURPQ8NCD3 748 aaPredicted RBP12.46□□□□□ -0.42
VAMP4-201ENST00000236192 AKT1S1Q96B36 256 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 LRCH3Q96II8 777 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 TKTL2Q9H0I9 626 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 LIPT1Q9Y234 373 aa12.46□□□□□ -0.42
VAMP4-201ENST00000236192 GRXCR2A6NFK2 248 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 SCAMP3O14828 347 aaKnown RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 FGF10O15520 208 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 RPL3P39023 403 aaKnown RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 PITPNBP48739 271 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 TAF6P49848 677 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 CPT1AP50416 773 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 WNT3AP56704 352 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 INCA1Q0VD86 236 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 BAATQ14032 418 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 CPSF6Q16630 551 aaKnown RBP eCLIP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 NXNL2Q5VZ03 156 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF772Q68DY9 489 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 PEG10Q86TG7 708 aaKnown RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ZFP82Q8N141 532 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 GGHQ92820 318 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF607Q96SK3 696 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 B3GNT5Q9BYG0 378 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 TMEM45AQ9NWC5 275 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ASH2LQ9UBL3 628 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 TRAPPC4Q9Y296 219 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 YARS2Q9Y2Z4 477 aaKnown RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 CLIC1O00299 241 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 STK25O00506 426 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 DPYSL4O14531 572 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ACSM4P0C7M7 580 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 SNHG28P0DPA3 235 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 PPM1FP49593 454 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ISL1P61371 349 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 GRIK4Q16099 956 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 SMN1Q16637 294 aaKnown RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 APOBEC3HQ6NTF7 200 aaKnown RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ARMC6Q6NXE6 501 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 TBPL2Q6SJ96 375 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 DPP9Q86TI2 863 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 OR2T11Q8NH01 316 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 CSGALNACT1Q8TDX6 532 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF566Q969W8 418 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 MYO5AQ9Y4I1 1855 aaKnown RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 D6RAR5 112 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ALPPP05187 535 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 SRSF11Q05519 484 aaKnown RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 GALNT2Q10471 571 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 TWF1Q12792 350 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 SLC16A12Q6ZSM3 486 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 PHACTR4Q8IZ21 702 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ADAMTS19Q8TE59 1207 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 SAMD11Q96NU1 681 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 HBEGFQ99075 208 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 OR10A4Q9H209 315 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 METTL17Q9H7H0 456 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-201ENST00000236192 OR5K3A6NET4 321 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 GLAP06280 429 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 CBR1P16152 277 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ALAS2P22557 587 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 CTNNB1P35222 781 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 CLCN4P51793 760 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 DPY19L1Q2PZI1 675 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 TCTE1Q5JU00 501 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 TSTD2Q5T7W7 516 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 NADSYN1Q6IA69 706 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 CD300LFQ8TDQ1 290 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms