RNA–Protein interactions for RNA: ENST00000229022.7

VDR-201, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VDR, Length 4,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-201ENST00000229022 MSANTD1Q6ZTZ1 278 aa12.6□□□□□ -0.39
VDR-201ENST00000229022 ERN2Q76MJ5 926 aaKnown RBP12.6□□□□□ -0.39
VDR-201ENST00000229022 SLC15A3Q8IY34 581 aa12.6□□□□□ -0.39
VDR-201ENST00000229022 ERMAPQ96PL5 475 aaPredicted RBP12.6□□□□□ -0.39
VDR-201ENST00000229022 GFM1Q96RP9 751 aaKnown RBP12.6□□□□□ -0.39
VDR-201ENST00000229022 SCDO00767 359 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 TLX2O43763 284 aaPredicted RBP12.59□□□□□ -0.39
VDR-201ENST00000229022 ARHGEF15O94989 841 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 BCKDHAP12694 445 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 JUPP14923 745 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 KDELR2P33947 212 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 PPP1R8Q12972 351 aaKnown RBP12.59□□□□□ -0.39
VDR-201ENST00000229022 COLEC12Q5KU26 742 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 RPS27LQ71UM5 84 aaKnown RBP12.59□□□□□ -0.39
VDR-201ENST00000229022 LINGO2Q7L985 606 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 GRASPQ7Z6J2 395 aaPredicted RBP12.59□□□□□ -0.39
VDR-201ENST00000229022 CLIP4Q8N3C7 705 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 ZNF366Q8N895 744 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 KXD1Q9BQD3 176 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 TSSK6Q9BXA6 273 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 RNF6Q9Y252 685 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 A0A1W2PRQ8 180 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 GJB5O95377 273 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 MATN1P21941 496 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 TIA1P31483 386 aaKnown RBP eCLIP12.59□□□□□ -0.39
VDR-201ENST00000229022 TXNL4AP83876 142 aaKnown RBP12.59□□□□□ -0.39
VDR-201ENST00000229022 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.39
VDR-201ENST00000229022 SLC29A4Q7RTT9 530 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 SYVN1Q86TM6 617 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 KBTBD6Q86V97 674 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 SDR16C5Q8N3Y7 309 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 MMP27Q9H306 513 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 DKK3Q9UBP4 350 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 EXOSC1Q9Y3B2 195 aaKnown RBP12.59□□□□□ -0.39
VDR-201ENST00000229022 STC2O76061 302 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 RASAL1O95294 804 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 HOXB2P14652 356 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 DCDC1P59894 354 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 VLDLRP98155 873 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 ZNF252P-AS1Q0IIN9 211 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 KCNAB2Q13303 367 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 MEP1AQ16819 746 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 PPP1R3AQ16821 1122 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 DPY19L3Q6ZPD9 716 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 DNAJA4Q8WW22 397 aaPredicted RBP12.59□□□□□ -0.39
VDR-201ENST00000229022 HMGB4Q8WW32 186 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 L3HYPDHQ96EM0 354 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 SAMD11Q96NU1 681 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 HIST1H2AAQ96QV6 131 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 GPR62Q9BZJ7 368 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 GIMAP2Q9UG22 337 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
VDR-201ENST00000229022 ERVK-11Q9UQG0 969 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 MYH10P35580 1976 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 MYH11P35749 1972 aa12.59□□□□□ -0.39
VDR-201ENST00000229022 TSPAN6O43657 245 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 HSD17B1P14061 328 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 SLC6A6P31641 620 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 PREPP48147 710 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 NUDT6P53370 316 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 LASP1Q14847 261 aaKnown RBP12.58□□□□□ -0.39
VDR-201ENST00000229022 SMU1Q2TAY7 513 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 SLC36A4Q6YBV0 504 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 DOHHQ9BU89 302 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 MKL2Q9ULH7 1088 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 PCDHGB2Q9Y5G2 931 aa12.58□□□□□ -0.39
VDR-201ENST00000229022 SCAMP1O15126 338 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 LEFTY1O75610 366 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 ATF6P18850 670 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 RPL10P27635 214 aaKnown RBP12.58□□□□□ -0.4
VDR-201ENST00000229022 MAGEA6P43360 314 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 CLDN8P56748 225 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 CSTF1Q05048 431 aaKnown RBP12.58□□□□□ -0.4
VDR-201ENST00000229022 LMAN2Q12907 356 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 ELAVL3Q14576 367 aaKnown RBP12.58□□□□□ -0.4
VDR-201ENST00000229022 TSTQ16762 297 aaKnown RBP12.58□□□□□ -0.4
VDR-201ENST00000229022 ITPRIPL2Q3MIP1 535 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 SLC9B2Q86UD5 537 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 RNF130Q86XS8 419 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 CEP97Q8IW35 865 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 PIGKQ92643 395 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 OR1I1O60431 355 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 MAPK3P27361 379 aaPredicted RBP12.58□□□□□ -0.4
VDR-201ENST00000229022 MLLT3P42568 568 aaPredicted RBP12.58□□□□□ -0.4
VDR-201ENST00000229022 RAB8AP61006 207 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 PTGR1Q14914 329 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 CDKL4Q5MAI5 379 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 ARL9Q6T311 187 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 GPRIN1Q7Z2K8 1008 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 MRPL10Q7Z7H8 261 aaKnown RBP12.58□□□□□ -0.4
VDR-201ENST00000229022 TMEM17Q86X19 198 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 PRSS58Q8IYP2 241 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 KCT2Q8NC54 265 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 MAGIXQ9H6Y5 334 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 SDHAF3Q9NRP4 125 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 MED11Q9P086 117 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 KCNK6Q9Y257 313 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 HSPE1-MOB4S4R3N1 261 aa12.58□□□□□ -0.4
VDR-201ENST00000229022 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.4
VDR-201ENST00000229022 ZNF670-ZNF695F2Z2N8 137 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms