RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ZNF282Q9UDV7 671 aaPredicted RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 TAC3Q9UHF0 121 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 DYRK1BQ9Y463 629 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 TNPO3Q9Y5L0 923 aaKnown RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 SPTBN1Q01082 2364 aaKnown RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 MDC1Q14676 2089 aaKnown RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 IGLV3-12A0A075B6K2 115 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 IGKV1-8A0A0C4DH67 115 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 UBXN8O00124 270 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 ALOX12BO75342 701 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 ALDH18A1P54886 795 aaKnown RBP17.1■□□□□ 0.33
PFN1-201ENST00000225655 RELAQ04206 551 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 KLC1Q07866 573 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 CRB2Q5IJ48 1285 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 IRAK1BP1Q5VVH5 260 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 ICE2Q659A1 982 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 ZNF425Q6IV72 752 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 Q6ZS92 163 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 CCDC63Q8NA47 563 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 OR56A3Q8NH54 315 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 STT3BQ8TCJ2 826 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 MVB12AQ96EY5 273 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 CRB3Q9BUF7 120 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 CAPS2Q9BXY5 557 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 CDC14AQ9UNH5 594 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 ACTL7BQ9Y614 415 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 KCNE2Q9Y6J6 123 aa17.1■□□□□ 0.33
PFN1-201ENST00000225655 STK16O75716 305 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 WDR47O94967 919 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 ZGLP1P0C6A0 271 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 EZRP15311 586 aaKnown RBP17.09■□□□□ 0.33
PFN1-201ENST00000225655 PIK3CGP48736 1102 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 SLC18A2Q05940 514 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 MRPL49Q13405 166 aaKnown RBP17.09■□□□□ 0.33
PFN1-201ENST00000225655 PFKFB4Q16877 469 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 AGAP7PQ5VUJ5 663 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 METTL2BQ6P1Q9 378 aaKnown RBP17.09■□□□□ 0.33
PFN1-201ENST00000225655 LCTLQ6UWM7 567 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 IGFL2Q6UWQ7 119 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 LRRC70Q7Z2Q7 622 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 C17orf64Q86WR6 236 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 CISD2Q8N5K1 135 aaKnown RBP17.09■□□□□ 0.33
PFN1-201ENST00000225655 TBC1D19Q8N5T2 526 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 CSNK1A1LQ8N752 337 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 RDH11Q8TC12 318 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 MIEF2Q96C03 454 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 CCDC126Q96EE4 140 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 AGAP4Q96P64 663 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 OR2A5Q96R48 311 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 SGPP1Q9BX95 441 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 SYNPO2LQ9H987 977 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 ASF1BQ9NVP2 202 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 ZNF358Q9NW07 568 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 CUEDC1Q9NWM3 386 aaPredicted RBP17.09■□□□□ 0.33
PFN1-201ENST00000225655 ANGPTL3Q9Y5C1 460 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 HIVEP3Q5T1R4 2406 aa17.09■□□□□ 0.33
PFN1-201ENST00000225655 ICE1Q9Y2F5 2266 aa17.08■□□□□ 0.33
PFN1-201ENST00000225655 PRPF4O43172 522 aaKnown RBP eCLIP17.08■□□□□ 0.322e-8■■■■■ 32.4
PFN1-201ENST00000225655 CCNT2O60583 730 aaKnown RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 SEMA7AO75326 666 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 FBLP22087 321 aaKnown RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 GGT5P36269 586 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 DSG2Q14126 1118 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 GARNL3Q5VVW2 1013 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 ADCK2Q7Z695 626 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 CUZD1Q86UP6 607 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 THOC6Q86W42 341 aaKnown RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 SLC22A9Q8IVM8 553 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 LRRC56Q8IYG6 542 aaPredicted RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 SNX31Q8N9S9 440 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 PPP4R1Q8TF05 950 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 SSC4DQ8WTU2 575 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 UBTD2Q8WUN7 234 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 SREK1Q8WXA9 508 aaKnown RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 RERGQ96A58 199 aaPredicted RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 PYCR2Q96C36 320 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 BARD1Q99728 777 aaKnown RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 WDR77Q9BQA1 342 aaPredicted RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 CD244Q9BZW8 370 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 LHPPQ9H008 270 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 SSU72Q9NP77 194 aaKnown RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 DNAJC11Q9NVH1 559 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 TMEM216Q9P0N5 145 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 OPTCQ9UBM4 332 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 C3orf18Q9UK00 162 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 PTBP2Q9UKA9 531 aaKnown RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 RUVBL1Q9Y265 456 aaKnown RBP17.08■□□□□ 0.32
PFN1-201ENST00000225655 PCDHGA10Q9Y5H3 936 aa17.08■□□□□ 0.32
PFN1-201ENST00000225655 FOXO6A8MYZ6 492 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 STX16-NPEPL1H3BU86 382 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 TXNDC9O14530 226 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 STX16O14662 325 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 MAP2K7O14733 419 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 CLGNO14967 610 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 CBX6O95503 412 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 HPP00738 406 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 MYL2P10916 166 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 ACPPP15309 386 aa17.07■□□□□ 0.32
PFN1-201ENST00000225655 ATP5F1P24539 256 aaPredicted RBP17.07■□□□□ 0.32
PFN1-201ENST00000225655 GRK3P35626 688 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms