RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 LRIF1Q5T3J3 769 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 CEACAM20Q6UY09 585 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 USP51Q70EK9 711 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 TSPYL5Q86VY4 417 aaPredicted RBP14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 AMZ2Q86W34 360 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 HEATR4Q86WZ0 1026 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 KRT73Q86Y46 540 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 ADAMTS19Q8TE59 1207 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 TRUB1Q8WWH5 349 aaKnown RBP14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 PAWRQ96IZ0 340 aaKnown RBP14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 ZFYVE19Q96K21 471 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 FERD3LQ96RJ6 166 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 LYSMD1Q96S90 227 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 CTPS2Q9NRF8 586 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 GMEB1Q9Y692 573 aa14.39□□□□□ -0.11
UBE2D4-201ENST00000222402 RTCAO00442 366 aaKnown RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 OR1F1O43749 312 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 DSTNP60981 165 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 PPIGQ13427 754 aaKnown RBP eCLIP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 ADNP2Q6IQ32 1131 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 Q6ZPB1 254 aaPredicted RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 SLC34A3Q8N130 599 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 CLIP4Q8N3C7 705 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 TFGQ92734 400 aaPredicted RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 UGDHO60701 494 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 SEC14L2O76054 403 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 STATHP02808 62 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 BCHEP06276 602 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 IL3P08700 152 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 INPP1P49441 399 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 UGT2B15P54855 530 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 ISL1P61371 349 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 SLC14A1Q13336 389 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 C1DQ13901 141 aaKnown RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 TIMM50Q3ZCQ8 353 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 B3GNT8Q7Z7M8 397 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 POF1BQ8WVV4 589 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 GEMIN6Q8WXD5 167 aaKnown RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 RAB8BQ92930 207 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 ITPAQ9BY32 194 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 DDX28Q9NUL7 540 aaKnown RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 ENPP5Q9UJA9 477 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 FGBP02675 491 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 ITIH1P19827 911 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 RYKP34925 604 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 RPS26P62854 115 aaKnown RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 LIPIQ6XZB0 460 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 CBLL1Q75N03 491 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 CHPFQ8IZ52 775 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 SLC5A8Q8N695 610 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 UBE2FQ969M7 185 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 CIDECQ96AQ7 238 aaPredicted RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 LGALS12Q96DT0 336 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 BARD1Q99728 777 aaKnown RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 SEMA3GQ9NS98 782 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 FAIMQ9NVQ4 179 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 TAS2R9Q9NYW1 312 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 MBD1Q9UIS9 605 aaPredicted RBP14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 ERGIC3Q9Y282 383 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 POFUT2Q9Y2G5 429 aa14.38□□□□□ -0.11
UBE2D4-201ENST00000222402 UPK1AO00322 258 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 SLC6A12P48065 614 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 CSNK2BP67870 215 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 HTRA3P83110 453 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 NFE2L1Q14494 772 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 HEPACAMQ14CZ8 416 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 KIAA0040Q15053 153 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 EXOC3L2Q2M3D2 409 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 RD3Q7Z3Z2 195 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 NDNFQ8TB73 568 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 ZNF480Q8WV37 535 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 KLK6Q92876 244 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 ZNF514Q96K75 400 aaPredicted RBP14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 TEX12Q9BXU0 123 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 CCL27Q9Y4X3 112 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 PIPSLA2A3N6 862 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 MYL12BO14950 172 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 TBX1O43435 398 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 KELP23276 732 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 IMPA1P29218 277 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 BUD31P41223 144 aaPredicted RBP14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 SGCGQ13326 291 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 DNASE1L3Q13609 305 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 AQP11Q8NBQ7 271 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 MCCC1Q96RQ3 725 aaPredicted RBP14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 ZNF607Q96SK3 696 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 TPK1Q9H3S4 243 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 PNMA8CA0A1B0GUJ8 204 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 DNAJB5O75953 348 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 PTX3P26022 381 aaPredicted RBP14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 DDX6P26196 483 aaKnown RBP eCLIP14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 TPP2P29144 1249 aaPredicted RBP14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 NTSP30990 170 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 VEZF1Q14119 521 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 MAD2L1BPQ15013 274 aaPredicted RBP14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 DHCR24Q15392 516 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 COLEC12Q5KU26 742 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 VNN3Q9NY84 501 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 DPP7Q9UHL4 492 aa14.37□□□□□ -0.11
UBE2D4-201ENST00000222402 INSL6Q9Y581 213 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms