RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 UGT2B15P54855 530 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 DOC2BQ14184 412 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.79■□□□□ 0.44
CACTIN-201ENST00000221899 LIPJQ5W064 366 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 OR5AK3PQ8NH89 298 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 NFKBIDQ8NI38 313 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 ZNF461Q8TAF7 563 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 ELAC1Q9H777 363 aaKnown RBP17.79■□□□□ 0.44
CACTIN-201ENST00000221899 ERVK13-1Q9NX77 482 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 EHD3Q9NZN3 535 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 CFAP20Q9Y6A4 193 aaKnown RBP17.79■□□□□ 0.44
CACTIN-201ENST00000221899 ANAPC1Q9H1A4 1944 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 ARHGEF33A8MVX0 844 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 PRRG1O14668 218 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 PCDH17O14917 1159 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 PRKCDQ05655 676 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 TSTQ16762 297 aaKnown RBP17.79■□□□□ 0.44
CACTIN-201ENST00000221899 BBS7Q8IWZ6 715 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 LILRA3Q8N6C8 439 aaPredicted RBP17.79■□□□□ 0.44
CACTIN-201ENST00000221899 SAMD11Q96NU1 681 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 NXF2Q9GZY0 626 aaKnown RBP17.79■□□□□ 0.44
CACTIN-201ENST00000221899 B4GALT6Q9UBX8 382 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 IGLV3-16A0A075B6K0 115 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 A6NL46 340 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 SAP18O00422 153 aaKnown RBP17.79■□□□□ 0.44
CACTIN-201ENST00000221899 MPC1LP0DKB6 136 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 GABRB1P18505 474 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 BMPR1AP36894 532 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 HBA1P69905 142 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 IFITM2Q01629 132 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 TSTA3Q13630 321 aaPredicted RBP17.79■□□□□ 0.44
CACTIN-201ENST00000221899 VEPH1Q14D04 833 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 ZNF513Q8N8E2 541 aaPredicted RBP17.79■□□□□ 0.44
CACTIN-201ENST00000221899 LMNTD1Q8N9Z9 388 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 OR4C15Q8NGM1 316 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 OR4K3Q96R72 315 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 LYSMD1Q96S90 227 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 SUV39H2Q9H5I1 410 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 POFUT2Q9Y2G5 429 aa17.79■□□□□ 0.44
CACTIN-201ENST00000221899 SRCP12931 536 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 BDKRB1P46663 353 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 PREPP48147 710 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 AP1S2P56377 157 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 COPZ1P61923 177 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 CYP4F8P98187 520 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 GPR162Q16538 588 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 MICAQ29983 383 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 IFI44LQ53G44 452 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 Q6ZNB5 142 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 HOMEZQ8IX15 550 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 NUAK2Q9H093 628 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 TRIM39Q9HCM9 518 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 CCDC59Q9P031 241 aaKnown RBP17.78■□□□□ 0.44
CACTIN-201ENST00000221899 KLHL42Q9P2K6 505 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 KLHL3Q9UH77 587 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 BTNL2Q9UIR0 455 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 LAMA3Q16787 3333 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 DYRK3O43781 588 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 DPM1O60762 260 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 CYP7B1O75881 506 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 C6orf47O95873 294 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 ANXA8P13928 327 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 POU1F1P28069 291 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 MC1RQ01726 317 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 SP140Q13342 867 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 SPANXN2Q5MJ10 180 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 RSBN1Q5VWQ0 802 aaPredicted RBP17.78■□□□□ 0.44
CACTIN-201ENST00000221899 OTOP2Q7RTS6 562 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 CACTIN-AS1Q8N1I8 211 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 HUS1BQ8NHY5 278 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 CIDECQ96AQ7 238 aaPredicted RBP17.78■□□□□ 0.44
CACTIN-201ENST00000221899 TSEN34Q9BSV6 310 aaKnown RBP17.78■□□□□ 0.44
CACTIN-201ENST00000221899 ABCB8Q9NUT2 735 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 MAP4K5Q9Y4K4 846 aa17.78■□□□□ 0.44
CACTIN-201ENST00000221899 FAM227AF5H4B4 570 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 EIF3FO00303 357 aaPredicted RBP17.77■□□□□ 0.44
CACTIN-201ENST00000221899 SELPP16109 830 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 SPINT3P49223 89 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 RPS13P62277 151 aaKnown RBP17.77■□□□□ 0.44
CACTIN-201ENST00000221899 SCARB2Q14108 478 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 PLEKHS1Q5SXH7 462 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 MLIPQ5VWP3 458 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 AGTRAPQ6RW13 159 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 MYLIPQ8WY64 445 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 C11orf24Q96F05 449 aaPredicted RBP17.77■□□□□ 0.44
CACTIN-201ENST00000221899 FAM129BQ96TA1 746 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 SLC35A5Q9BS91 424 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 CEP44Q9C0F1 390 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 TP63Q9H3D4 680 aaPredicted RBP17.77■□□□□ 0.44
CACTIN-201ENST00000221899 ZNF556Q9HAH1 456 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 EXO1Q9UQ84 846 aaKnown RBP17.77■□□□□ 0.44
CACTIN-201ENST00000221899 PEX16Q9Y5Y5 336 aa17.77■□□□□ 0.44
CACTIN-201ENST00000221899 LAMA2P24043 3122 aaKnown RBP17.77■□□□□ 0.43
CACTIN-201ENST00000221899 SERTM1A2A2V5 107 aa17.77■□□□□ 0.43
CACTIN-201ENST00000221899 CSNK1DP48730 415 aa17.77■□□□□ 0.43
CACTIN-201ENST00000221899 PRIM2P49643 509 aa17.77■□□□□ 0.43
CACTIN-201ENST00000221899 MVDP53602 400 aa17.77■□□□□ 0.43
CACTIN-201ENST00000221899 SNRPD1P62314 119 aaKnown RBP17.77■□□□□ 0.43
CACTIN-201ENST00000221899 TEAD4Q15561 434 aa17.77■□□□□ 0.43
CACTIN-201ENST00000221899 FBXO43Q4G163 708 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms