RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NFKBIL1Q9UBC1 381 aaPredicted RBP12.79□□□□□ -0.36
SRP54-201ENST00000216774 ZNF229Q9UJW7 825 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 PLK4O00444 970 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 AOC2O75106 756 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 HLA-EP13747 358 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 VIPR1P32241 457 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 PRKCDQ05655 676 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 GCNT6Q5T4J0 391 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 PNCKQ6P2M8 343 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 CCDC80Q76M96 950 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 NLRP8Q86W28 1048 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 SLC39A11Q8N1S5 342 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 TRAM1L1Q8N609 369 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 OR52N2Q8NGI0 321 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 RAET1EQ8TD07 263 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 SCAMP4Q969E2 229 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 TMEM159Q96B96 161 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 EFHD2Q96C19 240 aaPredicted RBP12.79□□□□□ -0.36
SRP54-201ENST00000216774 REPS1Q96D71 796 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 TMEM38AQ9H6F2 299 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 SH3BP4Q9P0V3 963 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 RAPGEFL1Q9UHV5 662 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 ENOPH1Q9UHY7 261 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 ZNF451Q9Y4E5 1061 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 TRAV19A0A0A6YYK7 116 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 WASH3PC4AMC7 463 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 GSSP48637 474 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 LIMK1P53667 647 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 SPIBQ01892 262 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 FPGSQ05932 587 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 ZNF763Q0D2J5 394 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 IRF3Q14653 427 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 TOR1AIP1Q5JTV8 583 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 SPOUT1Q5T280 376 aaKnown RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 HSD11B1LQ7Z5J1 315 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 RAVER1Q8IY67 606 aaKnown RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 LGI4Q8N135 537 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 STX19Q8N4C7 294 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 OXR1Q8N573 874 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 SCLYQ96I15 445 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 ZNF558Q96NG5 402 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 ZSCAN5AQ9BUG6 496 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 REEP4Q9H6H4 257 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 ZNF556Q9HAH1 456 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 HMX1Q9NP08 348 aaPredicted RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 POLE4Q9NR33 117 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 ABCB10Q9NRK6 738 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 GPATCH2Q9NW75 528 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 ZNF226Q9NYT6 803 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 EXO1Q9UQ84 846 aaKnown RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 TMEM202A6NGA9 273 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 OR2AG2A6NM03 316 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 SLC16A8O95907 504 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 PTTG1O95997 202 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 IFNA14P01570 189 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 INHAP05111 366 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 ADORA3P0DMS8 318 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 ETFAP13804 333 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 POLR2EP19388 210 aaKnown RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 IMPA1P29218 277 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 RPL3P39023 403 aaKnown RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 IDH2P48735 452 aaKnown RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 CDH12P55289 794 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 HBA1P69905 142 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 SCARB2Q14108 478 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 COLEC12Q5KU26 742 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 HENMT1Q5T8I9 393 aaKnown RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 MED27Q6P2C8 311 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.78□□□□□ -0.366e-6■■■□□ 19.1
SRP54-201ENST00000216774 Q6ZVU0 165 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 CHST14Q8NCH0 376 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 GPR156Q8NFN8 814 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 C9orf43Q8TAL5 461 aaPredicted RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.78□□□□□ -0.362e-7■□□□□ 11.3
SRP54-201ENST00000216774 GEMIN6Q8WXD5 167 aaKnown RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 CDADC1Q9BWV3 514 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 C6orf62Q9GZU0 229 aaPredicted RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 KLHL25Q9H0H3 589 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 EHD1Q9H4M9 534 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 RLIMQ9NVW2 624 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 IMPAD1Q9NX62 359 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 GPR83Q9NYM4 423 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 PCDHGA3Q9Y5H0 932 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 KLK4Q9Y5K2 254 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 KCNE2Q9Y6J6 123 aa12.78□□□□□ -0.36
SRP54-201ENST00000216774 MN1Q10571 1320 aaPredicted RBP12.78□□□□□ -0.36
SRP54-201ENST00000216774 HTR3EA5X5Y0 456 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 LEFTY2O00292 366 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 DSCR3O14972 297 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 TSPAN6O43657 245 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 ATG13O75143 517 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 EIF2S1P05198 315 aaKnown RBP12.77□□□□□ -0.36
SRP54-201ENST00000216774 CTSAP10619 480 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 S100A5P33763 92 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 RGS6P49758 472 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 RPS13P62277 151 aaKnown RBP12.77□□□□□ -0.36
SRP54-201ENST00000216774 PDE7AQ13946 482 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 EXOC3L2Q2M3D2 409 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 ZNF385BQ569K4 471 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 CRB2Q5IJ48 1285 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms