RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 FAM92BQ6ZTR7 304 aa11.16□□□□□ -0.62
DNMT3B-201ENST00000201963 ZNF433Q8N7K0 673 aaPredicted RBP11.16□□□□□ -0.62
DNMT3B-201ENST00000201963 L3HYPDHQ96EM0 354 aa11.16□□□□□ -0.62
DNMT3B-201ENST00000201963 FEVQ99581 238 aa11.16□□□□□ -0.62
DNMT3B-201ENST00000201963 DPH2Q9BQC3 489 aaPredicted RBP11.16□□□□□ -0.62
DNMT3B-201ENST00000201963 CFHR5Q9BXR6 569 aa11.16□□□□□ -0.62
DNMT3B-201ENST00000201963 KNTC1P50748 2209 aa11.16□□□□□ -0.62
DNMT3B-201ENST00000201963 TRAV6A0A075B6T7 132 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 TMEM221A6NGB7 291 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 TLX2O43763 284 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 ERP29P30040 261 aaKnown RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 MAP2K3P46734 347 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 GMFBP60983 142 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 MTAPQ13126 283 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 VMACQ2NL98 169 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 ATG9BQ674R7 924 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 SPRED1Q7Z699 444 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 C2orf73Q8N5S3 287 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 TCEANCQ8N8B7 351 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 PAPD5Q8NDF8 572 aaKnown RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 ZNF461Q8TAF7 563 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 MCMBPQ9BTE3 642 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 SPATA5L1Q9BVQ7 753 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 MAGEH1Q9H213 219 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 UGT2A1Q9Y4X1 527 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 A0A096LPI6 279 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 HAPLN1P10915 354 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 CPN2P22792 545 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 C21orf33P30042 268 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 SCARB2Q14108 478 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 HEPACAMQ14CZ8 416 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 DUOXA1Q1HG43 343 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 ATP13A5Q4VNC0 1218 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 FNDC3BQ53EP0 1204 aaKnown RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 C2orf27AQ580R0 203 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 UBXN11Q5T124 520 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 ATXN7L2Q5T6C5 722 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 LYPLAL1Q5VWZ2 237 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 SERPINA13PQ6UXR4 307 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 RANBP10Q6VN20 620 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 ZNF730Q6ZMV8 503 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 TAS1R1Q7RTX1 841 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 FAM124AQ86V42 546 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 ZSWIM9Q86XI8 627 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 FUNDC1Q8IVP5 155 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 NETO1Q8TDF5 533 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 AKAP1Q92667 903 aaKnown RBP eCLIP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 NLKQ9UBE8 527 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 SEC14L4Q9UDX3 406 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 NCKAP1Q9Y2A7 1128 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 DHRS7Q9Y394 339 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 OR2AG2A6NM03 316 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 HIDE1A8MVS5 230 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 KPNA3O00505 521 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 MAFKO60675 156 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 FGF4P08620 206 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 BCKDHAP12694 445 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 ITGB8P26012 769 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 IRS1P35568 1242 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 SEC13P55735 322 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 OXA1LQ15070 435 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 CRB2Q5IJ48 1285 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 KANK2Q63ZY3 851 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 TMEM173Q86WV6 379 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 BCL7BQ9BQE9 202 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 NEURL2Q9BR09 285 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 FBXO9Q9UK97 447 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 ENTPD4Q9Y227 616 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 SLC22A14Q9Y267 594 aa11.15□□□□□ -0.62
DNMT3B-201ENST00000201963 TRBC2A0A5B9 178 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 CPSF4LA6NMK7 179 aaKnown RBP11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 CTDSP2O14595 271 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 CHST10O43529 356 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 ACADMP11310 421 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 CLCN4P51793 760 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 RPA4Q13156 261 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 BCL7AQ4VC05 210 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 FRG2Q64ET8 278 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 STEAP3Q658P3 488 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 CHMP1BQ7LBR1 199 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 GPRIN1Q7Z2K8 1008 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 RTN4RL1Q86UN2 441 aaPredicted RBP11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 METTL4Q8N3J2 472 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 SNAPC3Q92966 411 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 MRPL48Q96GC5 212 aaKnown RBP11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 ERMAPQ96PL5 475 aaPredicted RBP11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 FRG2BQ96QU4 278 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 TMEM175Q9BSA9 504 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 RBM38Q9H0Z9 239 aaKnown RBP11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 SLITRK2Q9H156 845 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 ABCB8Q9NUT2 735 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 VPS29Q9UBQ0 182 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 FCF1Q9Y324 198 aaKnown RBP11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 GPR45Q9Y5Y3 372 aa11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 ZFP37Q9Y6Q3 630 aaPredicted RBP11.15□□□□□ -0.63
DNMT3B-201ENST00000201963 IRGMA1A4Y4 181 aa11.14□□□□□ -0.63
DNMT3B-201ENST00000201963 SAP18O00422 153 aaKnown RBP11.14□□□□□ -0.63
DNMT3B-201ENST00000201963 SEC14L2O76054 403 aa11.14□□□□□ -0.63
DNMT3B-201ENST00000201963 NTSP30990 170 aa11.14□□□□□ -0.63
DNMT3B-201ENST00000201963 NUP62P37198 522 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms