RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 LZTS3O60299 673 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 MYO1DO94832 1006 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 ACPPP15309 386 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 CD36P16671 472 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 GPR1P46091 355 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 TPTEP56180 551 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 CYP4F2P78329 520 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 COL9A2Q14055 689 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 CPTPQ5TA50 214 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 ZNF852Q6ZMS4 543 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 DPPA4Q7L190 304 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 HIPK1Q86Z02 1210 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 ZNF784Q8NCA9 323 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 OR5AK3PQ8NH89 298 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 WDR12Q9GZL7 423 aaKnown RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 ZBTB20Q9HC78 741 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 GIN1Q9NXP7 522 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 USE1Q9NZ43 259 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 ACSL6Q9UKU0 697 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 FZD4Q9ULV1 537 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 SAMHD1Q9Y3Z3 626 aaKnown RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 DBTP11182 482 aaKnown RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 HOXB9P17482 250 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 PRLHRP49683 370 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 CLK1P49759 484 aaKnown RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 ARHGDIAP52565 204 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 EPHA5P54756 1037 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 RAB15P59190 212 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 GAB1Q13480 694 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 VMACQ2NL98 169 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 SOWAHCQ53LP3 525 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 COLEC12Q5KU26 742 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 ZNF362Q5T0B9 420 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 RNF165Q6ZSG1 346 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 PTOV1Q86YD1 416 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 MMAAQ8IVH4 418 aaKnown RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 ZZZ3Q8IYH5 903 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 MMP21Q8N119 569 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 ARRDC3Q96B67 414 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 HSH2DQ96JZ2 352 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 TRIT1Q9H3H1 467 aaKnown RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 RNF167Q9H6Y7 350 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 B3GNT3Q9Y2A9 372 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 TPRKBQ9Y3C4 175 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 KCNE2Q9Y6J6 123 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 ATG2BQ96BY7 2078 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 LOC100506127A0A0U1RQW1 187 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 GRXCR1A8MXD5 290 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 SPINT1O43278 529 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 TBX1O43435 398 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 AP2A2O94973 939 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 CCNDBP1O95273 360 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 CISD3P0C7P0 127 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 GSTT2P0CG29 244 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 GSTT2BP0CG30 244 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 KDELR2P33947 212 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 RCVRNP35243 200 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 WASP42768 502 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 CRATP43155 626 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 ST13P50502 369 aaKnown RBP12.62□□□□□ -0.39
CTNS-201ENST00000046640 NUDT6P53370 316 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 MVKQ03426 396 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 KCNC4Q03721 635 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 SLBPQ14493 270 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTNS-201ENST00000046640 DMC1Q14565 340 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 PRSS36Q5K4E3 855 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 NAGSQ8N159 534 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 CIDECQ96AQ7 238 aaPredicted RBP12.62□□□□□ -0.39
CTNS-201ENST00000046640 LGALS12Q96DT0 336 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 ZHX1-C8orf76Q96EF9 292 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 RDH12Q96NR8 316 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 KCNC2Q96PR1 638 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 SPATA6Q9NWH7 488 aaPredicted RBP12.62□□□□□ -0.39
CTNS-201ENST00000046640 POU2F3Q9UKI9 436 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 RUVBL1Q9Y265 456 aaKnown RBP12.62□□□□□ -0.39
CTNS-201ENST00000046640 PTPRSQ13332 1948 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 M0R129 80 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 KIAA0355O15063 1070 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 RGS10O43665 173 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 GABARAPO95166 117 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 C1orf105O95561 183 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 SOD1P00441 154 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 GTF2E2P29084 291 aaKnown RBP12.62□□□□□ -0.39
CTNS-201ENST00000046640 C21orf33P30042 268 aaPredicted RBP12.62□□□□□ -0.39
CTNS-201ENST00000046640 DCDC1P59894 354 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 SRSF11Q05519 484 aaKnown RBP12.62□□□□□ -0.39
CTNS-201ENST00000046640 ZNF385BQ569K4 471 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 OR2T5Q6IEZ7 315 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 CHPFQ8IZ52 775 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 Q8N9G6 341 aaPredicted RBP12.62□□□□□ -0.39
CTNS-201ENST00000046640 OR2T29Q8NH02 315 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 PROX1Q92786 737 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 TIFAQ96CG3 184 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 KRT84Q9NSB2 600 aa12.62□□□□□ -0.39
CTNS-201ENST00000046640 LTBP2Q14767 1821 aa12.61□□□□□ -0.39
CTNS-201ENST00000046640 PCDH7O60245 1069 aa12.61□□□□□ -0.39
CTNS-201ENST00000046640 C6P13671 934 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms