RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 BCHEP06276 602 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 PAICSP22234 425 aaKnown RBP11.62□□□□□ -0.55
CHPF2-201ENST00000035307 NTSR1P30989 418 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 PGM2L1Q6PCE3 622 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF783Q6ZMS7 281 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 GLB1L3Q8NCI6 653 aaPredicted RBP11.62□□□□□ -0.55
CHPF2-201ENST00000035307 EID2BQ96D98 161 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 C1GALT1C1Q96EU7 318 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 UBXN10Q96LJ8 280 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 CCM2Q9BSQ5 444 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 DZANK1Q9NVP4 752 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 NEU3Q9UQ49 428 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 SVILO95425 2214 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 A0A0J9YVX5 310 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 ZW10O43264 779 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 RNGTTO60942 597 aaKnown RBP11.62□□□□□ -0.55
CHPF2-201ENST00000035307 ERN1O75460 977 aaKnown RBP11.62□□□□□ -0.55
CHPF2-201ENST00000035307 CD160O95971 181 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 VIPP01282 170 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 IFNW1P05000 195 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 IFNA16P05015 189 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 EBLN1P0CF75 366 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 OR2T5Q6IEZ7 315 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 P2RY8Q86VZ1 359 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 FUNDC1Q8IVP5 155 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 LGI4Q8N135 537 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 TCAIMQ8N3R3 496 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 OR5AR1Q8NGP9 310 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 OR2T29Q8NH02 315 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 STARD8Q92502 1023 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 KCNS3Q9BQ31 491 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 CLN6Q9NWW5 311 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 TVP23BQ9NYZ1 205 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 A0A0G2JMZ2 1700 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 LOC100130705A0A1B0GUX0 176 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 TBX1O43435 398 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 CTSLP07711 333 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 KRT20P35900 424 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 VBP1P61758 197 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 HYAL2Q12891 473 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 DUSP6Q16828 381 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 KANK2Q63ZY3 851 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 ATG14Q6ZNE5 492 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 RNF130Q86XS8 419 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 PSD4Q8NDX1 1056 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 UBE2E3Q969T4 207 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 GPR78Q96P69 363 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 MKRN2Q9H000 416 aaKnown RBP11.62□□□□□ -0.55
CHPF2-201ENST00000035307 PALMDQ9NP74 551 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 ADAP2Q9NPF8 381 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 CD207Q9UJ71 328 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 ERGIC3Q9Y282 383 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 SLC35F4A4IF30 521 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 E7EQ34 232 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 QSOX1O00391 747 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 SBK3P0C264 359 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 LAMP1P11279 417 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 CA5AP35218 305 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 ASMTP46597 345 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 UGT2B15P54855 530 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 PRRT3Q5FWE3 981 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 LRRTM4Q86VH4 590 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 RASGEF1AQ8N9B8 481 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 OR2T11Q8NH01 316 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 FAR1Q8WVX9 515 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 L3HYPDHQ96EM0 354 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 SORBS1Q9BX66 1292 aaKnown RBP11.61□□□□□ -0.55
CHPF2-201ENST00000035307 RBCK1Q9BYM8 510 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 TUBB1Q9H4B7 451 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 GDE1Q9NZC3 331 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 MBD1Q9UIS9 605 aaPredicted RBP11.61□□□□□ -0.55
CHPF2-201ENST00000035307 HS3ST2Q9Y278 367 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 ST14Q9Y5Y6 855 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 SPACA6W5XKT8 324 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 ALPK2Q86TB3 2170 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 TDRD6O60522 2096 aaKnown RBP11.61□□□□□ -0.55
CHPF2-201ENST00000035307 GADD45GO95257 159 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 EGFP01133 1207 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 C9P02748 559 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 CR2P20023 1033 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 AVPR1BP47901 424 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 TAS2R41P59536 307 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 CSNK2BP67870 215 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 SRSF11Q05519 484 aaKnown RBP11.61□□□□□ -0.55
CHPF2-201ENST00000035307 PRR23BQ6ZRT6 265 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 GPR149Q86SP6 731 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 OR10G2Q8NGC3 310 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 DNAJA3Q96EY1 480 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 AHCYL2Q96HN2 611 aaKnown RBP11.61□□□□□ -0.55
CHPF2-201ENST00000035307 SPACA7Q96KW9 195 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 HDHD2Q9H0R4 259 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 PRSS16Q9NQE7 514 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 THUMPD1Q9NXG2 353 aaKnown RBP11.61□□□□□ -0.55
CHPF2-201ENST00000035307 RIMS3Q9UJD0 308 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 CDH23Q9H251 3354 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 LRRC72A6NJI9 287 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 SNX4O95219 450 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 CD36P16671 472 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 GSTM5P46439 218 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 ILF3Q12906 894 aaKnown RBP eCLIP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms