RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 LRRC66Q68CR7 880 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 SYNPOQ8N3V7 929 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 GPR156Q8NFN8 814 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 CLSTN3Q9BQT9 956 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 ZNF226Q9NYT6 803 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 PLXNA4Q9HCM2 1894 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 MYO9BQ13459 2157 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 PNMA8CA0A1B0GUJ8 204 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 AP3D1O14617 1153 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 PCDH7O60245 1069 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 MTX2O75431 263 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 ARHGEF15O94989 841 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 AZGP1P25311 298 aaKnown RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 KRR1Q13601 381 aaKnown RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 EXOC3L2Q2M3D2 409 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 BCL7AQ4VC05 210 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 XKR6Q5GH73 641 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 LRRC73Q5JTD7 316 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 ZNF648Q5T619 568 aaPredicted RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 AGAP6Q5VW22 663 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 APCDD1Q8J025 514 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 PGBD3Q8N328 593 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 C7orf57Q8NEG2 295 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 IL17RDQ8NFM7 739 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 PLD4Q96BZ4 506 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 AGAP4Q96P64 663 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 YME1L1Q96TA2 773 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 P2RY13Q9BPV8 354 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 DOHHQ9BU89 302 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 FAM120CQ9NX05 1096 aaKnown RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 FBXL12Q9NXK8 326 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 TRPM5Q9NZQ8 1165 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 CCDC59Q9P031 241 aaKnown RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 NDUFAF4Q9P032 175 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 WBP11Q9Y2W2 641 aaKnown RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 VWA8A3KMH1 1905 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 TRBV5-4A0A0C4DH59 114 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 J3KTA2 159 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 INPPL1O15357 1258 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 RPLP2P05387 115 aaKnown RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 MLLT3P42568 568 aaPredicted RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 SLC15A1P46059 708 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 SLC11A1P49279 550 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 AP1S1P61966 158 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 ABRQ12979 859 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 PLD1Q13393 1074 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 VEZF1Q14119 521 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 ATP13A5Q4VNC0 1218 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 CPTPQ5TA50 214 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 LYPLAL1Q5VWZ2 237 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 METTL2BQ6P1Q9 378 aaKnown RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 MSANTD1Q6ZTZ1 278 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 TMEM173Q86WV6 379 aaPredicted RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 B3GNT7Q8NFL0 401 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 VPS29Q9UBQ0 182 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 ADAMDEC1O15204 470 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 HOXC11O43248 304 aaPredicted RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 HLA-EP13747 358 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 PTGS2P35354 604 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 DAB2P98082 770 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 GAB1Q13480 694 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 RGNQ15493 299 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 FBXO43Q4G163 708 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 NXNL2Q5VZ03 156 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 ADNP2Q6IQ32 1131 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 TPGS1Q6ZTW0 290 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 TSEN54Q7Z6J9 526 aaKnown RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 L3MBTL4Q8NA19 623 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 C11orf65Q8NCR3 313 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 NEDD4LQ96PU5 975 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 TCF25Q9BQ70 676 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 CNPPD1Q9BV87 410 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 NXF2Q9GZY0 626 aaKnown RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 ZNF556Q9HAH1 456 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 PLCXD1Q9NUJ7 323 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 MKLN1Q9UL63 735 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 BOLA1Q9Y3E2 137 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 A3GALT2U3KPV4 340 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 KIAA0100Q14667 2235 aaKnown RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 NPIPB15A6NHN6 443 aaPredicted RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 GABRR3A8MPY1 467 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 ETFAP13804 333 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 OR1D2P34982 312 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 SMARCB1Q12824 385 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 GANABQ14697 944 aaKnown RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 GPR33Q49SQ1 333 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 GGTA1PQ4G0N0 100 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 NRARPQ7Z6K4 114 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 IFNL1Q8IU54 200 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 C1orf52Q8N6N3 182 aaKnown RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 OR4A15Q8NGL6 344 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 WDR36Q8NI36 951 aaKnown RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 SOCS4Q8WXH5 440 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 MGLLQ99685 303 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 SLC12A9Q9BXP2 914 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 ZNF717Q9BY31 904 aaPredicted RBP10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 MARCH5Q9NX47 278 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 ZDHHC3Q9NYG2 299 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 CD84Q9UIB8 345 aa10.12□□□□□ -0.79
CX3CL1-201ENST00000006053 PCDHGA2Q9Y5H1 932 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms