RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Sall4Q8BX22 1067 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Eri3Q8C460 337 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Zbtb8bQ8CII0 484 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr666Q8VH00 318 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 HhatlQ9D1G3 503 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tubb3Q9ERD7 450 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Fgf21Q9JJN1 210 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tgm1Q9JLF6 815 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mnx1Q9QZW9 404 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 FcmrA1KXC4 422 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm10260F6YVP7 152 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 IkbkgO88522 412 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Sh3pxd2aO89032 1124 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 FshrP35378 692 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Kcnab1P63143 401 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Dlx5P70396 289 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 TgfbiP82198 683 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Zfp935Q14DI0 353 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tmem173Q3TBT3 378 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Spata6Q3U6K5 488 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rassf5Q5EBH1 413 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Krtcap2Q5RL79 136 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Med16Q6PGF3 828 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr1036Q7TR85 310 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Clec4b1Q7TS58 209 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 CyrenQ8BHZ5 157 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gprin3Q8BWS5 763 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ccdc28bQ8CEG5 200 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 RergQ8R367 199 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Clec2fQ8VI21 196 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Vsx1Q91V10 363 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 MydgfQ9CPT4 166 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Khdc3Q9CWU5 440 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rgs20Q9QZB1 239 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Nme4Q9WV84 186 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 MycsQ9Z304 431 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rhox2dW4VSN9 191 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Vmn1r90A0A087WR36 309 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 A0A1L1ST33 502 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mpig6bD7PDD4 242 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mcpt1P11034 246 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 IgfalsP70389 603 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Pros1Q08761 675 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Kcna7Q17ST2 489 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gsk3aQ2NL51 490 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 FcamrQ2TB54 535 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm8773Q3UQ24 132 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Xrcc1Q60596 631 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Map3k7Q62073 579 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Capn3Q64691 821 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 SvoplQ6PDF3 494 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Fgl1Q71KU9 314 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 AasdhQ80WC9 1100 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 TxlngQ8BHN1 524 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cd99l2Q8BIF0 237 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ikzf4Q8C208 586 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Q8CIL4 281 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Slc45a3Q8K0H7 553 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Lsm1Q8VC85 133 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ucn3Q924A4 164 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Def8Q99J78 448 aa9.51□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ralgapa1Q6GYP7 2035 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cdr1E9Q0B4 517 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm6811E9Q3Y8 510 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Colca2F8VPY8 239 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 GsnP13020 780 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Calb2Q08331 271 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr871Q7TRF0 311 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Adam4Q8CGQ2 763 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Dclre1cQ8K4J0 705 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 KptnQ8VCX6 430 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Impa2Q91UZ5 290 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Man2c1Q91W89 1039 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Sult5a1Q91X36 291 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Fam118aQ91YN1 357 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 ApmapQ9D7N9 415 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ift46Q9DB07 301 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Slco2a1Q9EPT5 643 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rad1Q9QWZ1 280 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Zbtb18Q9WUK6 522 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ak4Q9WUR9 223 aaKnown RBP9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Clic1Q9Z1Q5 241 aaKnown RBP9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rb1P13405 921 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Kcnc2Q14B80 642 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 GmncQ3URY2 333 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Zfp956Q3UZY6 572 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Lin28bQ45KJ6 247 aaKnown RBP9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tlr12Q6QNU9 906 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Trim23Q8BGX0 574 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cops7bQ8BV13 264 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Asrgl1Q8C0M9 326 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Bag5Q8CI32 447 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Nsl1Q8K305 281 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr952Q8VFD7 314 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mrgprb5Q91ZB9 322 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cers2Q924Z4 380 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 TcimQ9D915 106 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr955Q9EQ97 314 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Hapln2Q9ESM3 341 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ints1Q6P4S8 2195 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms