RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Mbd4Q9Z2D7 554 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Plekhh2Q8C115 1491 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Smok4aA0JLX3 433 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gstp3F6RWR5 210 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Vmn2r12L7N217 831 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Stra6O70491 670 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Ifna4P07351 186 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Khdc1bP0C7A0 126 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 BrafP28028 804 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 StarP51557 284 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rsu1Q01730 277 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Nkain3Q3URJ8 181 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 EndouQ3V188 412 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Nr2c1Q505F1 590 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Zdhhc8Q5Y5T5 762 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Cpsf6Q6NVF9 551 aaKnown RBP8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Plppr4Q7TME0 766 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 CenpoQ8K015 298 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Eif3lQ8QZY1 564 aaKnown RBP8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 NotumQ8R116 503 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Tmem268Q8R239 342 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Cops8Q8VBV7 209 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Ugt2b38Q91WH2 530 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Prmt7Q922X9 692 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 TympQ99N42 471 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dnase1l1Q9D7J6 314 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Med11Q9D8C6 117 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Slc7a8Q9QXW9 531 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 TsnaxQ9QZE7 290 aaKnown RBP8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Stub1Q9WUD1 304 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Adam17Q9Z0F8 827 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Olfr424E9Q0Q2 315 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 5430401F13RikE9Q328 175 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Magea4F2Z493 315 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gm6619F6URP1 175 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 GscQ02591 256 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gdf3Q07104 366 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gm21320Q4FZE8 181 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 NotoQ5TIS6 240 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Zfp92Q62396 488 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 RalyQ64012 312 aaKnown RBP8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Mppe1Q80XL7 396 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 RbakQ8BQC8 711 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 C5ar2Q8BW93 344 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Ssuh2Q8C3L1 340 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 PdxkQ8K183 312 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Olfr639Q8VGY8 316 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Mettl13Q91YR5 698 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Pofut1Q91ZW2 393 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 HnrnpmQ9D0E1 729 aaKnown RBP8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Psmg1Q9JK23 289 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Bace2Q9JL18 514 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Phc2Q9QWH1 850 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Osbpl10S4R1M9 766 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 MypnQ5DTJ9 1315 aa8.68□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2abC0HKE1 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2acC0HKE2 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2adC0HKE3 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2aeC0HKE4 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2agC0HKE5 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2aiC0HKE6 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2anC0HKE7 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2aoC0HKE8 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2apC0HKE9 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Cd200O54901 278 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 CideaO70302 217 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 DxoO70348 397 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 ZfrO88532 1074 aaKnown RBP8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Ctbp1O88712 441 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dnase1P49183 284 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 AnpepP97449 966 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Cass4Q08EC4 804 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Olfr125Q14AJ9 320 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Fscn2Q32M02 492 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Cyb5r4Q3TDX8 528 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Lrrc58Q3UGP9 366 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Klra6Q60653 266 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Ptger2Q62053 362 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist3h2aQ8BFU2 130 aaKnown RBP8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2afQ8CGP5 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hist1h2akQ8CGP7 130 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Pdik1lQ8QZR7 341 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Q8R3Y5 413 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Uroc1Q8VC12 676 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Klhl40Q9D783 621 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dclre1aQ9JIC3 1026 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 CtsmQ9JL96 333 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Grk1Q9WVL4 564 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Npc1l1Q6T3U4 1333 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Phlpp2Q8BXA7 1320 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Esp6A8R0U0 136 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Trdmt1O55055 415 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Tpst1O70281 370 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Timm13P62075 95 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 PrkcgP63318 697 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Frat1P70339 274 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Atp5jP97450 108 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Htr2bQ02152 479 aa8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rbbp7Q60973 425 aaKnown RBP8.67□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dus1lQ8C2P3 475 aa8.67□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms