RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Cdt1Q8R4E9 557 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Uqcrc2Q9DB77 453 aaKnown RBP10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Hey1Q9WV93 299 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Alpk2Q91ZB0 2144 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Zfp600A2A7V0 737 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 H60cB1B213 197 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Izumo4D3Z690 227 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 C1dO35473 141 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 GiprQ0P543 460 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Kcnh6Q32ME0 950 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Awat2Q6E1M8 333 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Pum1Q80U78 1189 aaKnown RBP10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Clrn3Q8BHH8 226 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tgm4Q8BZH1 670 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ddx52Q8K301 598 aaKnown RBP10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Kctd11Q8K485 232 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Vmn1r215Q8R264 300 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Olfr474Q8VFC9 310 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Adam33Q923W9 797 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 MmabQ9D273 237 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 IqchQ9D2K4 1071 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ptges3lQ9D9A7 131 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tlr4Q9QUK6 835 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Kpna3O35344 521 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Prl7a1O54830 266 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Btg3P50615 252 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nxf3Q4ZGD9 553 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Arhgef38Q80VK6 770 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc35b4Q8CIA5 331 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fndc5Q8K4Z2 209 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn1r69Q8VIC1 319 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Myl9Q9CQ19 172 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Prps2Q9CS42 318 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Twist2Q9D030 160 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Oser1Q9D722 291 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fam45aQ9D8N2 357 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Q9DAD0 168 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 PikfyveQ9Z1T6 2097 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tmem44E9Q4M0 433 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pcbp1P60335 356 aaKnown RBP10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fads2p1Q0VAX3 487 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 2900092C05RikQ5I0V9 184 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Serpinf2Q61247 491 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Maml1Q6T264 1020 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1308Q7TQX0 320 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Smad3Q8BUN5 425 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Crispld1Q8CGD2 500 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1467Q8VFW1 308 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mrpl15Q9CPR5 295 aaKnown RBP10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr704Q9EPF6 315 aa10.96□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm14147A2AQX6 640 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tgm7A2ART8 616 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm10715J3QP74 227 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm12794L7MTS5 483 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 NlkO54949 527 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Znf143O70230 638 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Matn4O89029 624 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 CfhP06909 1234 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Epb42P49222 691 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Snta1Q61234 503 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pkp4Q68FH0 1190 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gba2Q69ZF3 918 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ranbp10Q6VN19 620 aaKnown RBP10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 QpctlQ8BH73 383 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rgs8Q8BXT1 180 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1417Q8VGJ6 315 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 2410137M14RikQ9CWF0 162 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pin4Q9CWW6 131 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ramp2Q9WUP0 189 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Arrdc4A0A0B4J1F4 415 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn1r12G5E8G1 307 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm20695H3BLK7 282 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 MbP04247 154 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gnrh1P13562 90 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 ThP24529 498 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pin1rt1Q3ULQ2 159 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nr1h4Q60641 488 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Bcap29Q61334 240 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ip6k1Q6PD10 433 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Znf569Q80W31 679 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Itln1bQ80ZA0 313 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Them6Q80ZW2 207 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ttc24Q8BYG0 334 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Sphk1Q8CI15 382 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Arrb2Q91YI4 410 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Chmp1b1Q99LU0 199 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc26a5Q99NH7 744 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Prokr1Q9JKL1 393 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nectin3Q9JLB9 549 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 PnckQ9QYK9 343 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Chrna6Q9R0W9 494 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1253A2AUA2 318 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm7945F6QI24 236 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm14496K7N5U4 849 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Clcn7O70496 803 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fzd6Q61089 709 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1251Q7TQZ3 318 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Lrrtm2Q8BGA3 515 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Q8BHB7 409 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fastkd3Q8BSN9 661 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms