RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W NOP12Q08208 459 aaKnown RBP5.7□□□□□ -1.5
UBP8YMR223W HMI1Q12039 706 aa5.7□□□□□ -1.5
UBP8YMR223W ASF1P32447 279 aa5.69□□□□□ -1.5
UBP8YMR223W MCM7P38132 845 aa5.69□□□□□ -1.5
UBP8YMR223W MXR1P40029 184 aa5.69□□□□□ -1.5
UBP8YMR223W FYV10P40492 516 aa5.69□□□□□ -1.5
UBP8YMR223W NTO1Q12311 748 aa5.69□□□□□ -1.5
UBP8YMR223W PMI40P29952 429 aaKnown RBP5.68□□□□□ -1.5
UBP8YMR223W SLA2P33338 968 aa5.68□□□□□ -1.5
UBP8YMR223W PNT1P38969 423 aa5.68□□□□□ -1.5
UBP8YMR223W MSE1P48525 536 aa5.68□□□□□ -1.5
UBP8YMR223W YLR224WQ05947 369 aa5.68□□□□□ -1.5
UBP8YMR223W TMA10Q06177 86 aa5.68□□□□□ -1.5
UBP8YMR223W BI4P03879 638 aa5.67□□□□□ -1.5
UBP8YMR223W RPP2AP05319 106 aaKnown RBP5.67□□□□□ -1.5
UBP8YMR223W EMC1P25574 760 aa5.67□□□□□ -1.5
UBP8YMR223W TAF7Q05021 590 aa5.67□□□□□ -1.5
UBP8YMR223W DCG1P32460 244 aa5.66□□□□□ -1.5
UBP8YMR223W LYP1P32487 611 aa5.66□□□□□ -1.5
UBP8YMR223W PEP7P32609 515 aa5.66□□□□□ -1.5
UBP8YMR223W GTF1P53260 183 aaPredicted RBP5.66□□□□□ -1.5
UBP8YMR223W YAP6Q03935 383 aa5.66□□□□□ -1.5
UBP8YMR223W SPP382Q06411 708 aaPredicted RBP5.66□□□□□ -1.5
UBP8YMR223W PMA1P05030 918 aaKnown RBP5.65□□□□□ -1.5
UBP8YMR223W DBP2P24783 546 aaKnown RBP5.65□□□□□ -1.5
UBP8YMR223W MND2P40577 368 aa5.65□□□□□ -1.5
UBP8YMR223W MET12P46151 657 aa5.65□□□□□ -1.51
UBP8YMR223W HFM1P51979 1187 aa5.65□□□□□ -1.51
UBP8YMR223W NOP8Q08287 484 aaPredicted RBP5.65□□□□□ -1.51
UBP8YMR223W RKM4Q12504 494 aa5.65□□□□□ -1.51
UBP8YMR223W TAD3Q9URQ3 322 aa5.65□□□□□ -1.51
UBP8YMR223W IOC3P43596 787 aa5.64□□□□□ -1.51
UBP8YMR223W YLL058WQ12198 575 aa5.64□□□□□ -1.51
UBP8YMR223W TRP2P00899 507 aaKnown RBP5.63□□□□□ -1.51
UBP8YMR223W CDC34P14682 295 aa5.63□□□□□ -1.51
UBP8YMR223W DUT1P33317 147 aa5.63□□□□□ -1.51
UBP8YMR223W SNF7P39929 240 aaKnown RBP5.63□□□□□ -1.51
UBP8YMR223W ADY3Q07732 790 aa5.63□□□□□ -1.51
UBP8YMR223W TPO1Q07824 586 aa5.63□□□□□ -1.51
UBP8YMR223W MNR2P35724 969 aa5.62□□□□□ -1.51
UBP8YMR223W POA1P38218 177 aa5.62□□□□□ -1.51
UBP8YMR223W MET10P39692 1035 aa5.62□□□□□ -1.51
UBP8YMR223W AIM21P40563 679 aa5.62□□□□□ -1.51
UBP8YMR223W GCV2P49095 1034 aa5.62□□□□□ -1.51
UBP8YMR223W MTC3P53077 123 aa5.62□□□□□ -1.51
UBP8YMR223W CTF4Q01454 927 aa5.62□□□□□ -1.51
UBP8YMR223W YML020WQ03722 664 aa5.62□□□□□ -1.51
UBP8YMR223W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
UBP8YMR223W HIS5P07172 385 aa5.61□□□□□ -1.51
UBP8YMR223W PLB1P39105 664 aa5.61□□□□□ -1.51
UBP8YMR223W ZRG8P40021 1076 aa5.61□□□□□ -1.51
UBP8YMR223W CHA4P43634 648 aa5.61□□□□□ -1.51
UBP8YMR223W TYW3P53177 273 aa5.61□□□□□ -1.51
UBP8YMR223W SUN4P53616 420 aa5.61□□□□□ -1.51
UBP8YMR223W INO1P11986 533 aa5.6□□□□□ -1.51
UBP8YMR223W DEF1P35732 738 aaKnown RBP5.6□□□□□ -1.51
UBP8YMR223W YAP1801P38856 637 aa5.6□□□□□ -1.51
UBP8YMR223W SIP5P40210 489 aaKnown RBP5.6□□□□□ -1.51
UBP8YMR223W PHO23P50947 330 aa5.6□□□□□ -1.51
UBP8YMR223W SLI1P53304 468 aa5.6□□□□□ -1.51
UBP8YMR223W EEB1Q02891 456 aa5.6□□□□□ -1.51
UBP8YMR223W OSW2Q12202 724 aa5.6□□□□□ -1.51
UBP8YMR223W PET112P33893 541 aa5.59□□□□□ -1.51
UBP8YMR223W YKL107WP34251 309 aa5.58□□□□□ -1.52
UBP8YMR223W CHS7P38843 316 aa5.58□□□□□ -1.52
UBP8YMR223W OYE2Q03558 400 aaKnown RBP5.57□□□□□ -1.52
UBP8YMR223W SPO20Q04359 397 aa5.57□□□□□ -1.52
UBP8YMR223W YPL066WQ12194 479 aa5.57□□□□□ -1.52
UBP8YMR223W ENA1P13587 1091 aa5.57□□□□□ -1.52
UBP8YMR223W KRI1P42846 591 aaKnown RBP5.57□□□□□ -1.52
UBP8YMR223W YGL176CP46945 554 aa5.57□□□□□ -1.52
UBP8YMR223W EXG2P52911 562 aa5.57□□□□□ -1.52
UBP8YMR223W ENA2Q01896 1091 aa5.57□□□□□ -1.52
UBP8YMR223W XYL2Q07993 356 aa5.57□□□□□ -1.52
UBP8YMR223W MDM38Q08179 573 aa5.57□□□□□ -1.52
UBP8YMR223W ENA5Q12691 1091 aa5.57□□□□□ -1.52
UBP8YMR223W PIN4P34217 668 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
UBP8YMR223W YGR012WP53206 393 aa5.56□□□□□ -1.52
UBP8YMR223W FUN30P31380 1131 aa5.55□□□□□ -1.52
UBP8YMR223W MOT2P34909 587 aaKnown RBP5.55□□□□□ -1.52
UBP8YMR223W ATG19P35193 415 aa5.55□□□□□ -1.52
UBP8YMR223W MSS4P38994 779 aa5.55□□□□□ -1.52
UBP8YMR223W PSP2P50109 593 aaKnown RBP5.55□□□□□ -1.52
UBP8YMR223W CDA1Q06702 301 aa5.55□□□□□ -1.52
UBP8YMR223W HSF1P10961 833 aa5.54□□□□□ -1.52
UBP8YMR223W YKL151CP36059 337 aa5.54□□□□□ -1.52
UBP8YMR223W ECM21P38167 1117 aaKnown RBP5.54□□□□□ -1.52
UBP8YMR223W YGR053CP53234 283 aa5.54□□□□□ -1.52
UBP8YMR223W SRT1Q03175 343 aa5.54□□□□□ -1.52
UBP8YMR223W RPC82P32349 654 aa5.53□□□□□ -1.52
UBP8YMR223W KIN4Q01919 800 aa5.53□□□□□ -1.52
UBP8YMR223W HRQ1Q05549 1077 aa5.53□□□□□ -1.52
UBP8YMR223W ENB1Q08299 606 aa5.53□□□□□ -1.52
UBP8YMR223W SPE1P08432 466 aa5.52□□□□□ -1.53
UBP8YMR223W PFK1P16861 987 aaKnown RBP5.52□□□□□ -1.53
UBP8YMR223W RAD53P22216 821 aa5.52□□□□□ -1.53
UBP8YMR223W CCC2P38995 1004 aa5.52□□□□□ -1.53
UBP8YMR223W URM1P40554 99 aaPredicted RBP5.52□□□□□ -1.53
UBP8YMR223W AIM39Q08223 395 aa5.52□□□□□ -1.53
UBP8YMR223W KCS1Q12494 1050 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms