RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	HMI1	Q12039	706 aa		3.26	□□□□□ -1.89
CSN9	YDR179C	NTO1	Q12311	748 aa		3.26	□□□□□ -1.89
CSN9	YDR179C	RIB2	Q12362	591 aa	Known RBP	3.26	□□□□□ -1.89
CSN9	YDR179C	HEM3	P28789	327 aa		3.25	□□□□□ -1.89
CSN9	YDR179C	RER2	P35196	286 aa		3.25	□□□□□ -1.89
CSN9	YDR179C	MCM7	P38132	845 aa		3.25	□□□□□ -1.89
CSN9	YDR179C	TIF35	Q04067	274 aa	Known RBP	3.25	□□□□□ -1.89
CSN9	YDR179C	TMA10	Q06177	86 aa		3.25	□□□□□ -1.89
CSN9	YDR179C	RPL11A	P0C0W9	174 aa	Known RBP	3.24	□□□□□ -1.89
CSN9	YDR179C	EMC1	P25574	760 aa		3.24	□□□□□ -1.89
CSN9	YDR179C	DCG1	P32460	244 aa		3.24	□□□□□ -1.89
CSN9	YDR179C	POA1	P38218	177 aa		3.24	□□□□□ -1.89
CSN9	YDR179C	AIM21	P40563	679 aa		3.24	□□□□□ -1.89
CSN9	YDR179C	KRI1	P42846	591 aa	Known RBP	3.24	□□□□□ -1.89
CSN9	YDR179C	YFL054C	P43549	646 aa		3.24	□□□□□ -1.89
CSN9	YDR179C	GTF1	P53260	183 aa	Predicted RBP	3.24	□□□□□ -1.89
CSN9	YDR179C	YAP6	Q03935	383 aa		3.24	□□□□□ -1.89
CSN9	YDR179C	YLR224W	Q05947	369 aa		3.24	□□□□□ -1.89
CSN9	YDR179C	SPP382	Q06411	708 aa	Predicted RBP	3.24	□□□□□ -1.89
CSN9	YDR179C	RPL11B	Q3E757	174 aa	Predicted RBP	3.24	□□□□□ -1.89
CSN9	YDR179C	BI4	P03879	638 aa		3.23	□□□□□ -1.89
CSN9	YDR179C	PMA1	P05030	918 aa	Known RBP	3.23	□□□□□ -1.89
CSN9	YDR179C	PEP7	P32609	515 aa		3.23	□□□□□ -1.89
CSN9	YDR179C	SLA2	P33338	968 aa		3.23	□□□□□ -1.89
CSN9	YDR179C	MND2	P40577	368 aa		3.23	□□□□□ -1.89
CSN9	YDR179C	MET12	P46151	657 aa		3.23	□□□□□ -1.89
CSN9	YDR179C	YLL058W	Q12198	575 aa		3.23	□□□□□ -1.89
CSN9	YDR179C	RKM4	Q12504	494 aa		3.23	□□□□□ -1.89
CSN9	YDR179C	MCM2	P29469	868 aa		3.22	□□□□□ -1.89
CSN9	YDR179C	LYP1	P32487	611 aa		3.22	□□□□□ -1.89
CSN9	YDR179C	PNT1	P38969	423 aa		3.22	□□□□□ -1.89
CSN9	YDR179C	ZRG8	P40021	1076 aa		3.22	□□□□□ -1.89
CSN9	YDR179C	MXR1	P40029	184 aa		3.22	□□□□□ -1.89
CSN9	YDR179C	CTF4	Q01454	927 aa		3.22	□□□□□ -1.89
CSN9	YDR179C	OSW2	Q12202	724 aa		3.22	□□□□□ -1.89
CSN9	YDR179C	HIS5	P07172	385 aa		3.21	□□□□□ -1.9
CSN9	YDR179C	ATE1	P16639	503 aa		3.21	□□□□□ -1.9
CSN9	YDR179C	ATG19	P35193	415 aa		3.21	□□□□□ -1.9
CSN9	YDR179C	MNR2	P35724	969 aa		3.21	□□□□□ -1.9
CSN9	YDR179C	PSP2	P50109	593 aa	Known RBP	3.21	□□□□□ -1.9
CSN9	YDR179C	SPO20	Q04359	397 aa		3.21	□□□□□ -1.9
CSN9	YDR179C	SPR28	Q04921	423 aa		3.21	□□□□□ -1.9
CSN9	YDR179C	RRP15	Q06511	250 aa	Predicted RBP	3.21	□□□□□ -1.9
CSN9	YDR179C	ADY3	Q07732	790 aa		3.21	□□□□□ -1.9
CSN9	YDR179C	TPO1	Q07824	586 aa		3.21	□□□□□ -1.9
CSN9	YDR179C	TRP2	P00899	507 aa	Known RBP	3.2	□□□□□ -1.9
CSN9	YDR179C	ENA1	P13587	1091 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	NAP1	P25293	417 aa	Known RBP	3.2	□□□□□ -1.9
CSN9	YDR179C	PET112	P33893	541 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	YKL107W	P34251	309 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	DEF1	P35732	738 aa	Known RBP	3.2	□□□□□ -1.9
CSN9	YDR179C	PLB1	P39105	664 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	FYV10	P40492	516 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	HFM1	P51979	1187 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	TYW3	P53177	273 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	SUN4	P53616	420 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	ENA2	Q01896	1091 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	ENA5	Q12691	1091 aa		3.2	□□□□□ -1.9
CSN9	YDR179C	CDC34	P14682	295 aa		3.19	□□□□□ -1.9
CSN9	YDR179C	DBP2	P24783	546 aa	Known RBP	3.19	□□□□□ -1.9
CSN9	YDR179C	RPC82	P32349	654 aa		3.19	□□□□□ -1.9
CSN9	YDR179C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
CSN9	YDR179C	YAP1801	P38856	637 aa		3.19	□□□□□ -1.9
CSN9	YDR179C	MET10	P39692	1035 aa		3.19	□□□□□ -1.9
CSN9	YDR179C	CHA4	P43634	648 aa		3.19	□□□□□ -1.9
CSN9	YDR179C	GCV2	P49095	1034 aa		3.19	□□□□□ -1.9
CSN9	YDR179C	PHO23	P50947	330 aa		3.19	□□□□□ -1.9
CSN9	YDR179C	TAF7	Q05021	590 aa		3.19	□□□□□ -1.9
CSN9	YDR179C	AIM39	Q08223	395 aa		3.19	□□□□□ -1.9
CSN9	YDR179C	HSF1	P10961	833 aa		3.18	□□□□□ -1.9
CSN9	YDR179C	INO1	P11986	533 aa		3.18	□□□□□ -1.9
CSN9	YDR179C	PFK1	P16861	987 aa	Known RBP	3.18	□□□□□ -1.9
CSN9	YDR179C	FUN30	P31380	1131 aa		3.18	□□□□□ -1.9
CSN9	YDR179C	CHS7	P38843	316 aa		3.18	□□□□□ -1.9
CSN9	YDR179C	CCC2	P38995	1004 aa		3.18	□□□□□ -1.9
CSN9	YDR179C	MTC3	P53077	123 aa		3.18	□□□□□ -1.9
CSN9	YDR179C	YGR012W	P53206	393 aa		3.18	□□□□□ -1.9
CSN9	YDR179C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
CSN9	YDR179C	ENB1	Q08299	606 aa		3.18	□□□□□ -1.9
CSN9	YDR179C	RAD53	P22216	821 aa		3.17	□□□□□ -1.9
CSN9	YDR179C	SCT1	P32784	759 aa		3.17	□□□□□ -1.9
CSN9	YDR179C	DUT1	P33317	147 aa		3.17	□□□□□ -1.9
CSN9	YDR179C	MSS4	P38994	779 aa		3.17	□□□□□ -1.9
CSN9	YDR179C	SIP5	P40210	489 aa	Known RBP	3.17	□□□□□ -1.9
CSN9	YDR179C	YGL176C	P46945	554 aa		3.17	□□□□□ -1.9
CSN9	YDR179C	EXG2	P52911	562 aa		3.17	□□□□□ -1.9
CSN9	YDR179C	YML020W	Q03722	664 aa		3.17	□□□□□ -1.9
CSN9	YDR179C	MDM38	Q08179	573 aa		3.17	□□□□□ -1.9
CSN9	YDR179C	NOP8	Q08287	484 aa	Predicted RBP	3.17	□□□□□ -1.9
CSN9	YDR179C	GUP2	Q08929	609 aa		3.17	□□□□□ -1.9
CSN9	YDR179C	SPE1	P08432	466 aa		3.16	□□□□□ -1.9
CSN9	YDR179C	SRP1	Q02821	542 aa	Known RBP	3.16	□□□□□ -1.9
CSN9	YDR179C	EEB1	Q02891	456 aa		3.16	□□□□□ -1.9
CSN9	YDR179C	SRT1	Q03175	343 aa		3.16	□□□□□ -1.9
CSN9	YDR179C	OAR1	P35731	278 aa		3.15	□□□□□ -1.91
CSN9	YDR179C	ECM21	P38167	1117 aa	Known RBP	3.15	□□□□□ -1.91
CSN9	YDR179C	URM1	P40554	99 aa	Predicted RBP	3.15	□□□□□ -1.91
CSN9	YDR179C	KIN4	Q01919	800 aa		3.15	□□□□□ -1.91
CSN9	YDR179C	OYE2	Q03558	400 aa	Known RBP	3.15	□□□□□ -1.91
CSN9	YDR179C	CDA1	Q06702	301 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms