RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.15□□□□□ -0.63
PHGDH-219ENST00000641513 SLIT2O94813 1529 aa11.14□□□□□ -0.63
PHGDH-219ENST00000641513 SPATA31A6Q5VVP1 1343 aa11.14□□□□□ -0.63
PHGDH-219ENST00000641513 ANXA1P04083 346 aa11.14□□□□□ -0.63
PHGDH-219ENST00000641513 HSPA1LP34931 641 aa11.14□□□□□ -0.63
PHGDH-219ENST00000641513 CCT4P50991 539 aaKnown RBP11.14□□□□□ -0.63
PHGDH-219ENST00000641513 ZNF496Q96IT1 587 aaPredicted RBP11.14□□□□□ -0.63
PHGDH-219ENST00000641513 PHAXQ9H814 394 aaKnown RBP11.14□□□□□ -0.63
PHGDH-219ENST00000641513 TMOD3Q9NYL9 352 aa11.14□□□□□ -0.63
PHGDH-219ENST00000641513 DBF4Q9UBU7 674 aaPredicted RBP11.14□□□□□ -0.63
PHGDH-219ENST00000641513 THRAP3Q9Y2W1 955 aaKnown RBP11.14□□□□□ -0.63
PHGDH-219ENST00000641513 SPATA31A5Q5VU36 1347 aa11.13□□□□□ -0.63
PHGDH-219ENST00000641513 SPATA31A7Q8IWB4 1347 aa11.13□□□□□ -0.63
PHGDH-219ENST00000641513 TNS2Q63HR2 1409 aa11.13□□□□□ -0.63
PHGDH-219ENST00000641513 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
PHGDH-219ENST00000641513 SNRPA1P09661 255 aaKnown RBP11.13□□□□□ -0.63
PHGDH-219ENST00000641513 PDE4AP27815 886 aa11.13□□□□□ -0.63
PHGDH-219ENST00000641513 DDB1Q16531 1140 aa11.13□□□□□ -0.63
PHGDH-219ENST00000641513 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
PHGDH-219ENST00000641513 UNC5CLQ8IV45 518 aa11.13□□□□□ -0.63
PHGDH-219ENST00000641513 LRP6O75581 1613 aa11.13□□□□□ -0.63
PHGDH-219ENST00000641513 RGS3P49796 1198 aa11.12□□□□□ -0.63
PHGDH-219ENST00000641513 SYTL4Q96C24 671 aaPredicted RBP11.12□□□□□ -0.63
PHGDH-219ENST00000641513 ARFGEF2Q9Y6D5 1785 aa11.12□□□□□ -0.63
PHGDH-219ENST00000641513 HEG1Q9ULI3 1381 aa11.12□□□□□ -0.63
PHGDH-219ENST00000641513 PXDNLA1KZ92 1463 aa11.12□□□□□ -0.63
PHGDH-219ENST00000641513 PTCD1O75127 700 aaKnown RBP11.11□□□□□ -0.63
PHGDH-219ENST00000641513 MYL6BP14649 208 aa11.11□□□□□ -0.63
PHGDH-219ENST00000641513 PROSER3Q2NL68 480 aa11.11□□□□□ -0.63
PHGDH-219ENST00000641513 DDX21Q9NR30 783 aaKnown RBP eCLIP11.11□□□□□ -0.63
PHGDH-219ENST00000641513 HYPKQ9NX55 129 aa11.11□□□□□ -0.63
PHGDH-219ENST00000641513 USP21Q9UK80 565 aa11.11□□□□□ -0.63
PHGDH-219ENST00000641513 GLI3P10071 1580 aa11.11□□□□□ -0.63
PHGDH-219ENST00000641513 KCPQ6ZWJ8 1503 aa11.1□□□□□ -0.63
PHGDH-219ENST00000641513 DDX58O95786 925 aaKnown RBP11.1□□□□□ -0.63
PHGDH-219ENST00000641513 AIMP1Q12904 312 aaKnown RBP11.1□□□□□ -0.63
PHGDH-219ENST00000641513 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
PHGDH-219ENST00000641513 DDRGK1Q96HY6 314 aa11.1□□□□□ -0.63
PHGDH-219ENST00000641513 MEIS3Q99687 375 aa11.1□□□□□ -0.63
PHGDH-219ENST00000641513 BCL9LQ86UU0 1499 aa11.09□□□□□ -0.63
PHGDH-219ENST00000641513 PI4KAP2A4QPH2 592 aa11.09□□□□□ -0.63
PHGDH-219ENST00000641513 HDAC1Q13547 482 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-219ENST00000641513 VPS72Q15906 364 aa11.09□□□□□ -0.63
PHGDH-219ENST00000641513 BARGINQ6ZT62 677 aa11.09□□□□□ -0.63
PHGDH-219ENST00000641513 PI4KAP1Q8N8J0 262 aa11.09□□□□□ -0.63
PHGDH-219ENST00000641513 DNAAF4Q8WXU2 420 aa11.09□□□□□ -0.63
PHGDH-219ENST00000641513 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
PHGDH-219ENST00000641513 USP16Q9Y5T5 823 aa11.09□□□□□ -0.63
PHGDH-219ENST00000641513 GNAI3P08754 354 aa11.08□□□□□ -0.64
PHGDH-219ENST00000641513 PIP4K2AP48426 406 aaPredicted RBP11.08□□□□□ -0.64
PHGDH-219ENST00000641513 RIC3Q7Z5B4 369 aa11.08□□□□□ -0.64
PHGDH-219ENST00000641513 PIGBQ92521 554 aa11.08□□□□□ -0.64
PHGDH-219ENST00000641513 SRCIN1Q9C0H9 1055 aa11.08□□□□□ -0.64
PHGDH-219ENST00000641513 PDZRN3Q9UPQ7 1066 aa11.08□□□□□ -0.64
PHGDH-219ENST00000641513 MAP3K2Q9Y2U5 619 aa11.08□□□□□ -0.64
PHGDH-219ENST00000641513 NUP188Q5SRE5 1749 aa11.07□□□□□ -0.64
PHGDH-219ENST00000641513 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
PHGDH-219ENST00000641513 KSR2Q6VAB6 950 aa11.07□□□□□ -0.64
PHGDH-219ENST00000641513 FNBP4Q8N3X1 1017 aaPredicted RBP11.07□□□□□ -0.64
PHGDH-219ENST00000641513 XAGE3Q8WTP9 111 aa11.07□□□□□ -0.64
PHGDH-219ENST00000641513 ACSBG1Q96GR2 724 aa11.07□□□□□ -0.64
PHGDH-219ENST00000641513 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
PHGDH-219ENST00000641513 ASAP1Q9ULH1 1129 aa11.07□□□□□ -0.64
PHGDH-219ENST00000641513 AFF2P51816 1311 aa11.07□□□□□ -0.64
PHGDH-219ENST00000641513 TJP1Q07157 1748 aa11.06□□□□□ -0.64
PHGDH-219ENST00000641513 ADCY9O60503 1353 aa11.06□□□□□ -0.64
PHGDH-219ENST00000641513 GNAI2P04899 355 aa11.06□□□□□ -0.64
PHGDH-219ENST00000641513 UBTFL1P0CB47 393 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-219ENST00000641513 PDIA6Q15084 440 aa11.06□□□□□ -0.64
PHGDH-219ENST00000641513 FAM161AQ3B820 660 aa11.06□□□□□ -0.64
PHGDH-219ENST00000641513 COPS6Q7L5N1 327 aa11.06□□□□□ -0.64
PHGDH-219ENST00000641513 MARCH10Q8NA82 808 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-219ENST00000641513 ATG3Q9NT62 314 aa11.06□□□□□ -0.64
PHGDH-219ENST00000641513 BCL9O00512 1426 aa11.06□□□□□ -0.64
PHGDH-219ENST00000641513 SBF2Q86WG5 1849 aa11.05□□□□□ -0.64
PHGDH-219ENST00000641513 RPAP2Q8IXW5 612 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-219ENST00000641513 ANKRD44Q8N8A2 993 aa11.05□□□□□ -0.64
PHGDH-219ENST00000641513 BCL11AQ9H165 835 aa11.05□□□□□ -0.64
PHGDH-219ENST00000641513 ERBB4Q15303 1308 aa11.05□□□□□ -0.64
PHGDH-219ENST00000641513 ATP10DQ9P241 1426 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 HMMRO75330 724 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 A1BGP04217 495 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 NEXNQ0ZGT2 675 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 BEND3Q5T5X7 828 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 CEP85Q6P2H3 762 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 DNAJC10Q8IXB1 793 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 SIRT2Q8IXJ6 389 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 SMC5Q8IY18 1101 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 GCC1Q96CN9 775 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 TEX13AQ9BXU3 409 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-219ENST00000641513 C9orf78Q9NZ63 289 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-219ENST00000641513 ZNF330Q9Y3S2 320 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-219ENST00000641513 LRRFIP2Q9Y608 721 aaKnown RBP11.04□□□□□ -0.64
PHGDH-219ENST00000641513 BTAF1O14981 1849 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 THSD7AQ9UPZ6 1657 aa11.04□□□□□ -0.64
PHGDH-219ENST00000641513 NUP98P52948 1817 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 BRWD3Q6RI45 1802 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 ALDH1L1O75891 902 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 STARD3NLO95772 234 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 ANKRD45Q5TZF3 282 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms