RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 DDX21Q9NR30 783 aaKnown RBP eCLIP22.99■■□□□ 1.27
PHGDH-209ENST00000641074 UBR2Q8IWV8 1755 aa22.99■■□□□ 1.27
PHGDH-209ENST00000641074 DDB1Q16531 1140 aa22.99■■□□□ 1.27
PHGDH-209ENST00000641074 MEIS3Q99687 375 aa22.99■■□□□ 1.27
PHGDH-209ENST00000641074 HYPKQ9NX55 129 aa22.99■■□□□ 1.27
PHGDH-209ENST00000641074 PXDNLA1KZ92 1463 aa22.98■■□□□ 1.27
PHGDH-209ENST00000641074 VPS72Q15906 364 aa22.98■■□□□ 1.27
PHGDH-209ENST00000641074 KCPQ6ZWJ8 1503 aa22.98■■□□□ 1.27
PHGDH-209ENST00000641074 PIGBQ92521 554 aa22.97■■□□□ 1.27
PHGDH-209ENST00000641074 PI4KAP2A4QPH2 592 aa22.96■■□□□ 1.27
PHGDH-209ENST00000641074 PI4KAP1Q8N8J0 262 aa22.96■■□□□ 1.27
PHGDH-209ENST00000641074 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
PHGDH-209ENST00000641074 ITGB4P16144 1822 aa22.95■■□□□ 1.27
PHGDH-209ENST00000641074 ADCY9O60503 1353 aa22.95■■□□□ 1.26
PHGDH-209ENST00000641074 SIRT2Q8IXJ6 389 aa22.95■■□□□ 1.26
PHGDH-209ENST00000641074 PTCD1O75127 700 aaKnown RBP22.94■■□□□ 1.26
PHGDH-209ENST00000641074 DNAAF4Q8WXU2 420 aa22.94■■□□□ 1.26
PHGDH-209ENST00000641074 USP21Q9UK80 565 aa22.94■■□□□ 1.26
PHGDH-209ENST00000641074 LAMB4A4D0S4 1761 aa22.93■■□□□ 1.26
PHGDH-209ENST00000641074 MYL6BP14649 208 aa22.93■■□□□ 1.26
PHGDH-209ENST00000641074 SMC5Q8IY18 1101 aa22.93■■□□□ 1.26
PHGDH-209ENST00000641074 ASAP1Q9ULH1 1129 aa22.93■■□□□ 1.26
PHGDH-209ENST00000641074 PDZRN3Q9UPQ7 1066 aa22.93■■□□□ 1.26
PHGDH-209ENST00000641074 BCL9O00512 1426 aa22.93■■□□□ 1.26
PHGDH-209ENST00000641074 FAM98CQ17RN3 349 aaKnown RBP22.92■■□□□ 1.26
PHGDH-209ENST00000641074 KSR2Q6VAB6 950 aa22.92■■□□□ 1.26
PHGDH-209ENST00000641074 MARCH10Q8NA82 808 aaPredicted RBP22.92■■□□□ 1.26
PHGDH-209ENST00000641074 ATG3Q9NT62 314 aa22.92■■□□□ 1.26
PHGDH-209ENST00000641074 ATP10DQ9P241 1426 aa22.92■■□□□ 1.26
PHGDH-209ENST00000641074 RGS3P49796 1198 aa22.91■■□□□ 1.26
PHGDH-209ENST00000641074 MEX3CQ5U5Q3 659 aaKnown RBP22.91■■□□□ 1.26
PHGDH-209ENST00000641074 LRP10Q7Z4F1 713 aa22.91■■□□□ 1.26
PHGDH-209ENST00000641074 AIMP1Q12904 312 aaKnown RBP22.91■■□□□ 1.26
PHGDH-209ENST00000641074 BEND3Q5T5X7 828 aa22.91■■□□□ 1.26
PHGDH-209ENST00000641074 SRCIN1Q9C0H9 1055 aa22.91■■□□□ 1.26
PHGDH-209ENST00000641074 MAP3K2Q9Y2U5 619 aa22.91■■□□□ 1.26
PHGDH-209ENST00000641074 PIP4K2AP48426 406 aaPredicted RBP22.9■■□□□ 1.26
PHGDH-209ENST00000641074 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.89■■□□□ 1.26
PHGDH-209ENST00000641074 DDX58O95786 925 aaKnown RBP22.89■■□□□ 1.26
PHGDH-209ENST00000641074 PRIM1P49642 420 aaKnown RBP22.89■■□□□ 1.26
PHGDH-209ENST00000641074 CEP85Q6P2H3 762 aa22.89■■□□□ 1.26
PHGDH-209ENST00000641074 RPAP2Q8IXW5 612 aaPredicted RBP22.89■■□□□ 1.26
PHGDH-209ENST00000641074 ANKRD44Q8N8A2 993 aa22.89■■□□□ 1.26
PHGDH-209ENST00000641074 SYTL4Q96C24 671 aaPredicted RBP22.89■■□□□ 1.26
PHGDH-209ENST00000641074 USP44Q9H0E7 712 aa22.89■■□□□ 1.26
PHGDH-209ENST00000641074 DOT1LQ8TEK3 1739 aa22.89■■□□□ 1.25
PHGDH-209ENST00000641074 GNAI3P08754 354 aa22.89■■□□□ 1.25
PHGDH-209ENST00000641074 XAGE3Q8WTP9 111 aa22.89■■□□□ 1.25
PHGDH-209ENST00000641074 GNAI2P04899 355 aa22.88■■□□□ 1.25
PHGDH-209ENST00000641074 COPS6Q7L5N1 327 aa22.88■■□□□ 1.25
PHGDH-209ENST00000641074 KAT6BQ8WYB5 2073 aa22.88■■□□□ 1.25
PHGDH-209ENST00000641074 ERBB4Q15303 1308 aa22.87■■□□□ 1.25
PHGDH-209ENST00000641074 NBPF26B4DH59 902 aa22.86■■□□□ 1.25
PHGDH-209ENST00000641074 NBPF14Q5TI25 921 aa22.86■■□□□ 1.25
PHGDH-209ENST00000641074 NBPF10Q6P3W6 841 aaKnown RBP22.86■■□□□ 1.25
PHGDH-209ENST00000641074 NBPF15Q8N660 670 aa22.86■■□□□ 1.25
PHGDH-209ENST00000641074 VSIG10Q8N0Z9 540 aa22.86■■□□□ 1.25
PHGDH-209ENST00000641074 GCC1Q96CN9 775 aa22.86■■□□□ 1.25
PHGDH-209ENST00000641074 A1BGP04217 495 aa22.85■■□□□ 1.25
PHGDH-209ENST00000641074 AFF2P51816 1311 aa22.84■■□□□ 1.25
PHGDH-209ENST00000641074 RIC3Q7Z5B4 369 aa22.84■■□□□ 1.25
PHGDH-209ENST00000641074 ACSBG1Q96GR2 724 aa22.84■■□□□ 1.25
PHGDH-209ENST00000641074 RBM42Q9BTD8 480 aaKnown RBP22.84■■□□□ 1.25
PHGDH-209ENST00000641074 NUCB1Q02818 461 aa22.84■■□□□ 1.25
PHGDH-209ENST00000641074 ALDH1L1O75891 902 aa22.83■■□□□ 1.24
PHGDH-209ENST00000641074 UBTFL1P0CB47 393 aaPredicted RBP22.83■■□□□ 1.24
PHGDH-209ENST00000641074 ANKRD13DQ6ZTN6 518 aa22.83■■□□□ 1.24
PHGDH-209ENST00000641074 DNAJC10Q8IXB1 793 aa22.82■■□□□ 1.24
PHGDH-209ENST00000641074 LINS1Q8NG48 757 aa22.82■■□□□ 1.24
PHGDH-209ENST00000641074 TEX13AQ9BXU3 409 aaPredicted RBP22.82■■□□□ 1.24
PHGDH-209ENST00000641074 DCTPP1Q9H773 170 aa22.82■■□□□ 1.24
PHGDH-209ENST00000641074 RBM19Q9Y4C8 960 aaKnown RBP22.82■■□□□ 1.24
PHGDH-209ENST00000641074 LRRFIP2Q9Y608 721 aaKnown RBP22.82■■□□□ 1.24
PHGDH-209ENST00000641074 CWF19L2Q2TBE0 894 aaKnown RBP22.81■■□□□ 1.24
PHGDH-209ENST00000641074 NBPF7P0C2Y1 421 aaPredicted RBP22.81■■□□□ 1.24
PHGDH-209ENST00000641074 SLC4A9Q96Q91 983 aa22.81■■□□□ 1.24
PHGDH-209ENST00000641074 A0A0G2JS52 829 aa22.8■■□□□ 1.24
PHGDH-209ENST00000641074 PDE4AP27815 886 aa22.8■■□□□ 1.24
PHGDH-209ENST00000641074 MYT1Q01538 1121 aa22.8■■□□□ 1.24
PHGDH-209ENST00000641074 GJD4Q96KN9 370 aaPredicted RBP22.8■■□□□ 1.24
PHGDH-209ENST00000641074 METTL22Q9BUU2 404 aaPredicted RBP22.8■■□□□ 1.24
PHGDH-209ENST00000641074 ANKRD45Q5TZF3 282 aa22.79■■□□□ 1.24
PHGDH-209ENST00000641074 CHD1LQ86WJ1 897 aa22.79■■□□□ 1.24
PHGDH-209ENST00000641074 THSD7AQ9UPZ6 1657 aa22.79■■□□□ 1.24
PHGDH-209ENST00000641074 HMMRO75330 724 aa22.78■■□□□ 1.24
PHGDH-209ENST00000641074 IGKV5-2P06315 115 aa22.78■■□□□ 1.24
PHGDH-209ENST00000641074 STARD3NLO95772 234 aa22.78■■□□□ 1.24
PHGDH-209ENST00000641074 ATP8B2P98198 1209 aa22.78■■□□□ 1.24
PHGDH-209ENST00000641074 PLBD2Q8NHP8 589 aa22.78■■□□□ 1.24
PHGDH-209ENST00000641074 LNPKQ9C0E8 428 aa22.78■■□□□ 1.24
PHGDH-209ENST00000641074 ATRNO75882 1429 aa22.77■■□□□ 1.24
PHGDH-209ENST00000641074 NEXNQ0ZGT2 675 aa22.77■■□□□ 1.24
PHGDH-209ENST00000641074 MYD88Q99836 296 aa22.77■■□□□ 1.24
PHGDH-209ENST00000641074 C9orf78Q9NZ63 289 aaPredicted RBP22.77■■□□□ 1.24
PHGDH-209ENST00000641074 KCNQ2O43526 872 aa22.76■■□□□ 1.23
PHGDH-209ENST00000641074 TTLL7Q6ZT98 887 aa22.76■■□□□ 1.23
PHGDH-209ENST00000641074 BACH2Q9BYV9 841 aa22.76■■□□□ 1.23
PHGDH-209ENST00000641074 TRPC5Q9UL62 973 aaPredicted RBP22.76■■□□□ 1.23
PHGDH-209ENST00000641074 PNMA6EA0A0J9YXQ4 647 aa22.76■■□□□ 1.23
PHGDH-209ENST00000641074 ARFGEF2Q9Y6D5 1785 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms