RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 RAB6BQ9NRW1 208 aa10.21□□□□□ -0.77
SCARB2-224ENST00000640880 RNF223E7ERA6 249 aa10.2□□□□□ -0.78
SCARB2-224ENST00000640880 LILRA1O75019 489 aa10.2□□□□□ -0.78
SCARB2-224ENST00000640880 SMTNP53814 917 aa10.2□□□□□ -0.78
SCARB2-224ENST00000640880 PSMA6P60900 246 aaKnown RBP10.2□□□□□ -0.78
SCARB2-224ENST00000640880 DUSP9Q99956 384 aaKnown RBP10.2□□□□□ -0.78
SCARB2-224ENST00000640880 QTRT2Q9H974 415 aaKnown RBP10.2□□□□□ -0.78
SCARB2-224ENST00000640880 MRS2Q9HD23 443 aa10.2□□□□□ -0.78
SCARB2-224ENST00000640880 PARP2Q9UGN5 583 aa10.2□□□□□ -0.78
SCARB2-224ENST00000640880 TLL2Q9Y6L7 1015 aa10.2□□□□□ -0.78
SCARB2-224ENST00000640880 GPR182O15218 404 aa10.19□□□□□ -0.78
SCARB2-224ENST00000640880 PDE3BQ13370 1112 aa10.19□□□□□ -0.78
SCARB2-224ENST00000640880 MTFR1Q15390 333 aa10.19□□□□□ -0.78
SCARB2-224ENST00000640880 CCDC116Q8IYX3 515 aa10.19□□□□□ -0.78
SCARB2-224ENST00000640880 ABTB2Q8N961 1025 aa10.19□□□□□ -0.78
SCARB2-224ENST00000640880 ANKLE1Q8NAG6 615 aa10.19□□□□□ -0.78
SCARB2-224ENST00000640880 FAM129BQ96TA1 746 aa10.19□□□□□ -0.78
SCARB2-224ENST00000640880 PPP1R1BQ9UD71 204 aaPredicted RBP10.19□□□□□ -0.78
SCARB2-224ENST00000640880 CHMP3Q9Y3E7 222 aa10.19□□□□□ -0.78
SCARB2-224ENST00000640880 IGHA2P01877 340 aa10.18□□□□□ -0.78
SCARB2-224ENST00000640880 SF3A1Q15459 793 aaKnown RBP10.18□□□□□ -0.78
SCARB2-224ENST00000640880 LDLRAD1Q5T700 205 aa10.18□□□□□ -0.78
SCARB2-224ENST00000640880 PPP1R26Q5T8A7 1209 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-224ENST00000640880 ARHGEF10LQ9HCE6 1279 aa10.18□□□□□ -0.78
SCARB2-224ENST00000640880 LRFN2Q9ULH4 789 aa10.18□□□□□ -0.78
SCARB2-224ENST00000640880 ATP2B2Q01814 1243 aa10.17□□□□□ -0.78
SCARB2-224ENST00000640880 RC3H1Q5TC82 1133 aaKnown RBP10.17□□□□□ -0.78
SCARB2-224ENST00000640880 ATCAYQ86WG3 371 aa10.17□□□□□ -0.78
SCARB2-224ENST00000640880 TMEM87AQ8NBN3 555 aa10.17□□□□□ -0.78
SCARB2-224ENST00000640880 MYO19Q96H55 970 aa10.17□□□□□ -0.78
SCARB2-224ENST00000640880 RNF19AQ9NV58 838 aa10.17□□□□□ -0.78
SCARB2-224ENST00000640880 WWC3Q9ULE0 1092 aa10.17□□□□□ -0.78
SCARB2-224ENST00000640880 MROH2BQ7Z745 1585 aa10.17□□□□□ -0.78
SCARB2-224ENST00000640880 ZBTB39O15060 712 aa10.16□□□□□ -0.78
SCARB2-224ENST00000640880 ADD1P35611 737 aaKnown RBP10.16□□□□□ -0.78
SCARB2-224ENST00000640880 ITGAEP38570 1179 aa10.16□□□□□ -0.78
SCARB2-224ENST00000640880 TMC4Q7Z404 712 aa10.16□□□□□ -0.78
SCARB2-224ENST00000640880 ALKBH8Q96BT7 664 aaKnown RBP10.16□□□□□ -0.78
SCARB2-224ENST00000640880 NGLY1Q96IV0 654 aa10.16□□□□□ -0.78
SCARB2-224ENST00000640880 USP3Q9Y6I4 520 aa10.16□□□□□ -0.78
SCARB2-224ENST00000640880 ATAD2BQ9ULI0 1458 aa10.16□□□□□ -0.78
SCARB2-224ENST00000640880 PEG3Q9GZU2 1588 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 SORBS3O60504 671 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 IL2RAP01589 272 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 GGCXP38435 758 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 RPIAP49247 311 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 PSMD2Q13200 908 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 TLR1Q15399 786 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 FAM26DQ5JW98 314 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 FAM177A1Q8N128 213 aaPredicted RBP10.15□□□□□ -0.78
SCARB2-224ENST00000640880 UBXN4Q92575 508 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 SETDB2Q96T68 719 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 VTI1BQ9UEU0 232 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 HMGXB3Q12766 1538 aa10.15□□□□□ -0.78
SCARB2-224ENST00000640880 ADH1CP00326 375 aa10.14□□□□□ -0.79
SCARB2-224ENST00000640880 BRD2P25440 801 aaKnown RBP10.14□□□□□ -0.79
SCARB2-224ENST00000640880 DAB2P98082 770 aa10.14□□□□□ -0.79
SCARB2-224ENST00000640880 XAGE2Q96GT9 111 aa10.14□□□□□ -0.79
SCARB2-224ENST00000640880 NIF3L1Q9GZT8 377 aa10.14□□□□□ -0.79
SCARB2-224ENST00000640880 POLIQ9UNA4 740 aa10.14□□□□□ -0.79
SCARB2-224ENST00000640880 BAZ1BQ9UIG0 1483 aaKnown RBP10.14□□□□□ -0.79
SCARB2-224ENST00000640880 PNMA6FA0A0J9YX94 578 aa10.13□□□□□ -0.79
SCARB2-224ENST00000640880 CDK2AP1O14519 115 aa10.13□□□□□ -0.79
SCARB2-224ENST00000640880 HMGB1P09429 215 aaKnown RBP10.13□□□□□ -0.79
SCARB2-224ENST00000640880 NR5A1Q13285 461 aa10.13□□□□□ -0.79
SCARB2-224ENST00000640880 NT5DC4Q86YG4 428 aa10.13□□□□□ -0.79
SCARB2-224ENST00000640880 MPNDQ8N594 471 aa10.13□□□□□ -0.79
SCARB2-224ENST00000640880 PIK3R5Q8WYR1 880 aa10.13□□□□□ -0.79
SCARB2-224ENST00000640880 PGPEP1Q9NXJ5 209 aa10.13□□□□□ -0.79
SCARB2-224ENST00000640880 IQSEC3Q9UPP2 1182 aaPredicted RBP10.13□□□□□ -0.79
SCARB2-224ENST00000640880 NCAPD3P42695 1498 aa10.12□□□□□ -0.79
SCARB2-224ENST00000640880 SERTM1A2A2V5 107 aa10.12□□□□□ -0.79
SCARB2-224ENST00000640880 EML1O00423 815 aa10.12□□□□□ -0.79
SCARB2-224ENST00000640880 KCNC4Q03721 635 aa10.12□□□□□ -0.79
SCARB2-224ENST00000640880 RAD51AP2Q09MP3 1159 aa10.12□□□□□ -0.79
SCARB2-224ENST00000640880 METTL16Q86W50 562 aaKnown RBP10.12□□□□□ -0.79
SCARB2-224ENST00000640880 NBPF15Q8N660 670 aa10.12□□□□□ -0.79
SCARB2-224ENST00000640880 CNKSR1Q969H4 720 aa10.12□□□□□ -0.79
SCARB2-224ENST00000640880 PUS7Q96PZ0 661 aaKnown RBP10.12□□□□□ -0.79
SCARB2-224ENST00000640880 WIZO95785 1651 aa10.12□□□□□ -0.79
SCARB2-224ENST00000640880 CD2BP2O95400 341 aaKnown RBP10.11□□□□□ -0.79
SCARB2-224ENST00000640880 NR3C2P08235 984 aa10.11□□□□□ -0.79
SCARB2-224ENST00000640880 HSP90B1P14625 803 aaKnown RBP10.11□□□□□ -0.79
SCARB2-224ENST00000640880 DNM1Q05193 864 aaKnown RBP10.11□□□□□ -0.79
SCARB2-224ENST00000640880 ENOX2Q16206 610 aaKnown RBP10.11□□□□□ -0.79
SCARB2-224ENST00000640880 SH3PXD2AQ5TCZ1 1133 aa10.11□□□□□ -0.79
SCARB2-224ENST00000640880 POTEAQ6S8J7 498 aa10.11□□□□□ -0.79
SCARB2-224ENST00000640880 GJD3Q8N144 294 aa10.11□□□□□ -0.79
SCARB2-224ENST00000640880 EDEM1Q92611 657 aa10.11□□□□□ -0.79
SCARB2-224ENST00000640880 ZNF232Q9UNY5 417 aa10.11□□□□□ -0.79
SCARB2-224ENST00000640880 SIAH2O43255 324 aa10.1□□□□□ -0.79
SCARB2-224ENST00000640880 MZF1P28698 734 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-224ENST00000640880 DGKZQ13574 1117 aa10.1□□□□□ -0.79
SCARB2-224ENST00000640880 ETFBKMTQ8IXQ9 262 aa10.1□□□□□ -0.79
SCARB2-224ENST00000640880 ESYT1Q9BSJ8 1104 aa10.1□□□□□ -0.79
SCARB2-224ENST00000640880 METTL5Q9NRN9 209 aaKnown RBP10.1□□□□□ -0.79
SCARB2-224ENST00000640880 USP5P45974 858 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 HIRAP54198 1017 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-224ENST00000640880 FANCCQ00597 558 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 TEAD4Q15561 434 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms