RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 AKAP4Q5JQC9 854 aa15.72■□□□□ 0.11
ERGIC3-220ENST00000640748 TM4SF1P30408 202 aa15.71■□□□□ 0.11
ERGIC3-220ENST00000640748 DNAJC10Q8IXB1 793 aa15.71■□□□□ 0.11
ERGIC3-220ENST00000640748 SLC52A2Q9HAB3 445 aa15.71■□□□□ 0.11
ERGIC3-220ENST00000640748 POLRMTO00411 1230 aaKnown RBP15.7■□□□□ 0.1
ERGIC3-220ENST00000640748 IFFO2Q5TF58 517 aa15.7■□□□□ 0.1
ERGIC3-220ENST00000640748 NMRK2Q9NPI5 230 aa15.7■□□□□ 0.1
ERGIC3-220ENST00000640748 SOS1Q07889 1333 aaPredicted RBP15.69■□□□□ 0.1
ERGIC3-220ENST00000640748 KCPQ6ZWJ8 1503 aa15.69■□□□□ 0.1
ERGIC3-220ENST00000640748 RNMTO43148 476 aaKnown RBP15.69■□□□□ 0.1
ERGIC3-220ENST00000640748 HMOX1P09601 288 aa15.69■□□□□ 0.1
ERGIC3-220ENST00000640748 CYP19A1P11511 503 aaPredicted RBP15.69■□□□□ 0.1
ERGIC3-220ENST00000640748 CHRNA5P30532 468 aa15.69■□□□□ 0.1
ERGIC3-220ENST00000640748 SLC39A6Q13433 755 aa15.69■□□□□ 0.1
ERGIC3-220ENST00000640748 WDR43Q15061 677 aaKnown RBP eCLIP15.69■□□□□ 0.1
ERGIC3-220ENST00000640748 PIM2Q9P1W9 311 aa15.69■□□□□ 0.1
ERGIC3-220ENST00000640748 ARFGEF1Q9Y6D6 1849 aa15.68■□□□□ 0.1
ERGIC3-220ENST00000640748 MTHFSDQ2M296 383 aaKnown RBP15.68■□□□□ 0.1
ERGIC3-220ENST00000640748 C9orf131Q5VYM1 1079 aa15.68■□□□□ 0.1
ERGIC3-220ENST00000640748 TOMM70O94826 608 aa15.67■□□□□ 0.1
ERGIC3-220ENST00000640748 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
ERGIC3-220ENST00000640748 USPL1Q5W0Q7 1092 aa15.67■□□□□ 0.1
ERGIC3-220ENST00000640748 BCL2L12Q9HB09 334 aa15.67■□□□□ 0.1
ERGIC3-220ENST00000640748 ZBTB1Q9Y2K1 713 aa15.66■□□□□ 0.1
ERGIC3-220ENST00000640748 NFIXQ14938 502 aa15.65■□□□□ 0.1
ERGIC3-220ENST00000640748 DNAJC5GQ8N7S2 189 aa15.65■□□□□ 0.1
ERGIC3-220ENST00000640748 NARFQ9UHQ1 456 aa15.65■□□□□ 0.1
ERGIC3-220ENST00000640748 COL15A1P39059 1388 aa15.64■□□□□ 0.09
ERGIC3-220ENST00000640748 ZPR1O75312 459 aa15.64■□□□□ 0.09
ERGIC3-220ENST00000640748 APLP1P51693 650 aa15.64■□□□□ 0.09
ERGIC3-220ENST00000640748 CFAP53Q96M91 514 aa15.64■□□□□ 0.09
ERGIC3-220ENST00000640748 COL3A1P02461 1466 aaPredicted RBP15.64■□□□□ 0.09
ERGIC3-220ENST00000640748 NRXN2Q9P2S2 1712 aa15.63■□□□□ 0.09
ERGIC3-220ENST00000640748 DIAPH1O60610 1272 aaKnown RBP15.63■□□□□ 0.09
ERGIC3-220ENST00000640748 VSIG10Q8N0Z9 540 aa15.63■□□□□ 0.09
ERGIC3-220ENST00000640748 ADAMTS8Q9UP79 889 aa15.63■□□□□ 0.09
ERGIC3-220ENST00000640748 UBR2Q8IWV8 1755 aa15.62■□□□□ 0.09
ERGIC3-220ENST00000640748 VIRMAQ69YN4 1812 aaKnown RBP15.62■□□□□ 0.09
ERGIC3-220ENST00000640748 RNF181Q9P0P0 153 aa15.62■□□□□ 0.09
ERGIC3-220ENST00000640748 AFDNP55196 1824 aaKnown RBP15.61■□□□□ 0.09
ERGIC3-220ENST00000640748 PRELPP51888 382 aa15.61■□□□□ 0.09
ERGIC3-220ENST00000640748 RBM46Q8TBY0 533 aaKnown RBP15.61■□□□□ 0.09
ERGIC3-220ENST00000640748 CARMIL3Q8ND23 1372 aa15.61■□□□□ 0.09
ERGIC3-220ENST00000640748 EIF5P55010 431 aaKnown RBP15.6■□□□□ 0.09
ERGIC3-220ENST00000640748 RASSF7Q02833 373 aa15.6■□□□□ 0.09
ERGIC3-220ENST00000640748 IL17REQ8NFR9 667 aa15.6■□□□□ 0.09
ERGIC3-220ENST00000640748 SBF1O95248 1867 aa15.6■□□□□ 0.09
ERGIC3-220ENST00000640748 SERPINB2P05120 415 aa15.59■□□□□ 0.09
ERGIC3-220ENST00000640748 CANXP27824 592 aaKnown RBP15.59■□□□□ 0.09
ERGIC3-220ENST00000640748 HTRA3P83110 453 aa15.58■□□□□ 0.08
ERGIC3-220ENST00000640748 ZNF496Q96IT1 587 aaPredicted RBP15.58■□□□□ 0.08
ERGIC3-220ENST00000640748 KDM2BQ8NHM5 1336 aa15.58■□□□□ 0.08
ERGIC3-220ENST00000640748 DLEC1Q9Y238 1755 aa15.57■□□□□ 0.08
ERGIC3-220ENST00000640748 RRAGCQ9HB90 399 aa15.57■□□□□ 0.08
ERGIC3-220ENST00000640748 FSTL1Q12841 308 aa15.56■□□□□ 0.08
ERGIC3-220ENST00000640748 ZNF790Q6PG37 636 aa15.56■□□□□ 0.08
ERGIC3-220ENST00000640748 NUDCQ9Y266 331 aa15.56■□□□□ 0.08
ERGIC3-220ENST00000640748 HEG1Q9ULI3 1381 aa15.56■□□□□ 0.08
ERGIC3-220ENST00000640748 WDR90Q96KV7 1748 aa15.56■□□□□ 0.08
ERGIC3-220ENST00000640748 SIPA1L3O60292 1781 aaPredicted RBP15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 CEMIPQ8WUJ3 1361 aa15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 ZC3H4Q9UPT8 1303 aaKnown RBP15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 NFKBIEO00221 500 aa15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 STARD3NLO95772 234 aa15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 NEFLP07196 543 aa15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 BICDL1Q6ZP65 573 aa15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 C2CD5Q86YS7 1000 aa15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 TTC5Q8N0Z6 440 aa15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 TTLL6Q8N841 843 aa15.55■□□□□ 0.08
ERGIC3-220ENST00000640748 TNRC6CQ9HCJ0 1690 aaKnown RBP15.54■□□□□ 0.08
ERGIC3-220ENST00000640748 GNAT3A8MTJ3 354 aa15.54■□□□□ 0.08
ERGIC3-220ENST00000640748 U2SURPO15042 1029 aaKnown RBP15.54■□□□□ 0.08
ERGIC3-220ENST00000640748 LMNB1P20700 586 aa15.54■□□□□ 0.08
ERGIC3-220ENST00000640748 C16orf71Q8IYS4 520 aaPredicted RBP15.54■□□□□ 0.08
ERGIC3-220ENST00000640748 PHACTR3Q96KR7 559 aa15.54■□□□□ 0.08
ERGIC3-220ENST00000640748 SCN7AQ01118 1682 aa15.54■□□□□ 0.08
ERGIC3-220ENST00000640748 ANKRD31Q8N7Z5 1873 aa15.53■□□□□ 0.08
ERGIC3-220ENST00000640748 KCNQ3O43525 872 aa15.53■□□□□ 0.08
ERGIC3-220ENST00000640748 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
ERGIC3-220ENST00000640748 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
ERGIC3-220ENST00000640748 A0A087WZG4 1122 aa15.52■□□□□ 0.08
ERGIC3-220ENST00000640748 H0YIN7 160 aa15.52■□□□□ 0.08
ERGIC3-220ENST00000640748 A1BGP04217 495 aa15.52■□□□□ 0.08
ERGIC3-220ENST00000640748 TEFQ10587 303 aa15.52■□□□□ 0.08
ERGIC3-220ENST00000640748 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.08
ERGIC3-220ENST00000640748 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
ERGIC3-220ENST00000640748 KLRG1Q96E93 195 aa15.52■□□□□ 0.08
ERGIC3-220ENST00000640748 TBC1D2BQ9UPU7 963 aa15.52■□□□□ 0.08
ERGIC3-220ENST00000640748 GLTPD2A6NH11 291 aa15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 CAMTA2O94983 1202 aa15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 IL6STP40189 918 aaPredicted RBP15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 PRR5LQ6MZQ0 368 aa15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 CCDC146Q8IYE0 955 aa15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 JMYQ8N9B5 988 aa15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 BRIP1Q9BX63 1249 aa15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 TEX13AQ9BXU3 409 aaPredicted RBP15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 RSPH6AQ9H0K4 717 aa15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 COL11A2P13942 1736 aaPredicted RBP15.51■□□□□ 0.07
ERGIC3-220ENST00000640748 POTECB2RU33 542 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms