RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 ATP5J2-PTCD1G3V325 749 aa17.1■□□□□ 0.33
GFAP-237ENST00000640552 EIF5BO60841 1220 aaKnown RBP17.1■□□□□ 0.33
GFAP-237ENST00000640552 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
GFAP-237ENST00000640552 AMOTQ4VCS5 1084 aa17.09■□□□□ 0.33
GFAP-237ENST00000640552 SOS1Q07889 1333 aaPredicted RBP17.09■□□□□ 0.33
GFAP-237ENST00000640552 FER1L4A9Z1Z3 1794 aa17.08■□□□□ 0.33
GFAP-237ENST00000640552 CLASRPQ8N2M8 674 aaKnown RBP17.08■□□□□ 0.33
GFAP-237ENST00000640552 SNX21Q969T3 373 aa17.08■□□□□ 0.33
GFAP-237ENST00000640552 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.33
GFAP-237ENST00000640552 PALD1Q9ULE6 856 aa17.08■□□□□ 0.33
GFAP-237ENST00000640552 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.32
GFAP-237ENST00000640552 AACSQ86V21 672 aa17.08■□□□□ 0.32
GFAP-237ENST00000640552 MYD88Q99836 296 aa17.08■□□□□ 0.32
GFAP-237ENST00000640552 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
GFAP-237ENST00000640552 NEXNQ0ZGT2 675 aa17.07■□□□□ 0.32
GFAP-237ENST00000640552 PRDM11Q9NQV5 511 aa17.07■□□□□ 0.32
GFAP-237ENST00000640552 G3BP1Q13283 466 aaKnown RBP eCLIP17.07■□□□□ 0.32
GFAP-237ENST00000640552 L1TD1Q5T7N2 865 aaKnown RBP17.07■□□□□ 0.32
GFAP-237ENST00000640552 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
GFAP-237ENST00000640552 ESYT1Q9BSJ8 1104 aa17.07■□□□□ 0.32
GFAP-237ENST00000640552 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
GFAP-237ENST00000640552 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
GFAP-237ENST00000640552 GIGYF1O75420 1035 aaPredicted RBP17.06■□□□□ 0.32
GFAP-237ENST00000640552 DDX58O95786 925 aaKnown RBP17.06■□□□□ 0.32
GFAP-237ENST00000640552 CPA1P15085 419 aa17.06■□□□□ 0.32
GFAP-237ENST00000640552 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
GFAP-237ENST00000640552 KIF1BPQ96EK5 621 aa17.05■□□□□ 0.32
GFAP-237ENST00000640552 CCDC85AQ96PX6 553 aaPredicted RBP17.05■□□□□ 0.32
GFAP-237ENST00000640552 ARHGAP23Q9P227 1491 aa17.05■□□□□ 0.32
GFAP-237ENST00000640552 CHMLP26374 656 aa17.05■□□□□ 0.32
GFAP-237ENST00000640552 CABP4P57796 275 aa17.05■□□□□ 0.32
GFAP-237ENST00000640552 BEND3Q5T5X7 828 aa17.04■□□□□ 0.32
GFAP-237ENST00000640552 BOLA2Q9H3K6 86 aa17.04■□□□□ 0.32
GFAP-237ENST00000640552 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
GFAP-237ENST00000640552 CAVIN1Q6NZI2 390 aaKnown RBP17.04■□□□□ 0.32
GFAP-237ENST00000640552 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
GFAP-237ENST00000640552 SLIT1O75093 1534 aa17.04■□□□□ 0.32
GFAP-237ENST00000640552 ZNF496Q96IT1 587 aaPredicted RBP17.04■□□□□ 0.32
GFAP-237ENST00000640552 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
GFAP-237ENST00000640552 NDUFB9Q9Y6M9 179 aa17.04■□□□□ 0.32
GFAP-237ENST00000640552 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
GFAP-237ENST00000640552 EVA1CP58658 441 aa17.03■□□□□ 0.32
GFAP-237ENST00000640552 CNTROBQ8N137 903 aa17.03■□□□□ 0.32
GFAP-237ENST00000640552 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
GFAP-237ENST00000640552 KSR2Q6VAB6 950 aa17.02■□□□□ 0.32
GFAP-237ENST00000640552 IL25Q9H293 177 aa17.02■□□□□ 0.32
GFAP-237ENST00000640552 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.32
GFAP-237ENST00000640552 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
GFAP-237ENST00000640552 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.32
GFAP-237ENST00000640552 KNDC1Q76NI1 1749 aa17.02■□□□□ 0.31
GFAP-237ENST00000640552 RAB3GAP1Q15042 981 aa17.02■□□□□ 0.31
GFAP-237ENST00000640552 UBE3BQ7Z3V4 1068 aa17.02■□□□□ 0.31
GFAP-237ENST00000640552 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.31
GFAP-237ENST00000640552 TMEM94Q12767 1356 aa17.01■□□□□ 0.31
GFAP-237ENST00000640552 BAG4O95429 457 aaKnown RBP17.01■□□□□ 0.31
GFAP-237ENST00000640552 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
GFAP-237ENST00000640552 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
GFAP-237ENST00000640552 PIK3C2AO00443 1686 aa17.01■□□□□ 0.31
GFAP-237ENST00000640552 SSH3Q8TE77 659 aa17■□□□□ 0.31
GFAP-237ENST00000640552 SUCLG2Q96I99 432 aa17■□□□□ 0.31
GFAP-237ENST00000640552 IBTKQ9P2D0 1353 aaPredicted RBP17■□□□□ 0.31
GFAP-237ENST00000640552 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
GFAP-237ENST00000640552 AK9Q5TCS8 1911 aa17■□□□□ 0.31
GFAP-237ENST00000640552 ADGRL3Q9HAR2 1447 aa17■□□□□ 0.31
GFAP-237ENST00000640552 ERBB3P21860 1342 aa17■□□□□ 0.31
GFAP-237ENST00000640552 GPATCH3Q96I76 525 aa17■□□□□ 0.31
GFAP-237ENST00000640552 NEUROD6Q96NK8 337 aa17■□□□□ 0.31
GFAP-237ENST00000640552 GRM8O00222 908 aa16.99■□□□□ 0.31
GFAP-237ENST00000640552 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
GFAP-237ENST00000640552 DNAJC2Q99543 621 aaKnown RBP16.99■□□□□ 0.31
GFAP-237ENST00000640552 NAP1L2Q9ULW6 460 aaPredicted RBP16.99■□□□□ 0.31
GFAP-237ENST00000640552 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
GFAP-237ENST00000640552 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
GFAP-237ENST00000640552 FSD1Q9BTV5 496 aa16.99■□□□□ 0.31
GFAP-237ENST00000640552 HYPKQ9NX55 129 aa16.99■□□□□ 0.31
GFAP-237ENST00000640552 NUCB2P80303 420 aa16.99■□□□□ 0.31
GFAP-237ENST00000640552 HSP90AB4PQ58FF6 505 aa16.99■□□□□ 0.31
GFAP-237ENST00000640552 EDC3Q96F86 508 aaKnown RBP16.99■□□□□ 0.31
GFAP-237ENST00000640552 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
GFAP-237ENST00000640552 CIZ1Q9ULV3 898 aaPredicted RBP16.99■□□□□ 0.31
GFAP-237ENST00000640552 PRPF40BQ6NWY9 871 aaKnown RBP16.98■□□□□ 0.31
GFAP-237ENST00000640552 RBM27Q9P2N5 1060 aaKnown RBP16.98■□□□□ 0.31
GFAP-237ENST00000640552 ANP32BQ92688 251 aaKnown RBP16.98■□□□□ 0.31
GFAP-237ENST00000640552 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
GFAP-237ENST00000640552 ANKRD13DQ6ZTN6 518 aa16.97■□□□□ 0.31
GFAP-237ENST00000640552 VIRMAQ69YN4 1812 aaKnown RBP16.97■□□□□ 0.31
GFAP-237ENST00000640552 A0A087WZG4 1122 aa16.97■□□□□ 0.31
GFAP-237ENST00000640552 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.31
GFAP-237ENST00000640552 GRPEL1Q9HAV7 217 aa16.96■□□□□ 0.31
GFAP-237ENST00000640552 DDX21Q9NR30 783 aaKnown RBP eCLIP16.96■□□□□ 0.31
GFAP-237ENST00000640552 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.31
GFAP-237ENST00000640552 TLR7Q9NYK1 1049 aaKnown RBP16.96■□□□□ 0.31
GFAP-237ENST00000640552 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.31
GFAP-237ENST00000640552 PXDNQ92626 1479 aa16.96■□□□□ 0.3
GFAP-237ENST00000640552 CADPS2Q86UW7 1296 aa16.95■□□□□ 0.3
GFAP-237ENST00000640552 RNF214Q8ND24 703 aa16.95■□□□□ 0.3
GFAP-237ENST00000640552 LINS1Q8NG48 757 aa16.95■□□□□ 0.3
GFAP-237ENST00000640552 ADCY9O60503 1353 aa16.95■□□□□ 0.3
GFAP-237ENST00000640552 LARP1Q6PKG0 1096 aaKnown RBP16.95■□□□□ 0.3
GFAP-237ENST00000640552 JAKMIP1Q96N16 626 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms