RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
NECAP1-224ENST00000640099 MAP3K2Q9Y2U5 619 aa9.36□□□□□ -0.91
NECAP1-224ENST00000640099 IBTKQ9P2D0 1353 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-224ENST00000640099 MYL6BP14649 208 aa9.35□□□□□ -0.91
NECAP1-224ENST00000640099 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-224ENST00000640099 PROSER2Q86WR7 435 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-224ENST00000640099 TMX3Q96JJ7 454 aa9.35□□□□□ -0.91
NECAP1-224ENST00000640099 FER1L4A9Z1Z3 1794 aa9.35□□□□□ -0.91
NECAP1-224ENST00000640099 FMN2Q9NZ56 1722 aa9.35□□□□□ -0.91
NECAP1-224ENST00000640099 NWD1Q149M9 1564 aa9.35□□□□□ -0.91
NECAP1-224ENST00000640099 NLRP2Q9NX02 1062 aa9.35□□□□□ -0.91
NECAP1-224ENST00000640099 SPG7Q9UQ90 795 aa9.35□□□□□ -0.91
NECAP1-224ENST00000640099 CPA1P15085 419 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 BEND3Q5T5X7 828 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 CWC27Q6UX04 472 aaKnown RBP9.34□□□□□ -0.91
NECAP1-224ENST00000640099 SIL1Q9H173 461 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 OSBPL3Q9H4L5 887 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 SALL3Q9BXA9 1300 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 ANKARQ7Z5J8 1434 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 RNMTO43148 476 aaKnown RBP9.34□□□□□ -0.91
NECAP1-224ENST00000640099 MRE11P49959 708 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 KRT28Q7Z3Y7 464 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 CHRNA2Q15822 529 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 AKAP4Q5JQC9 854 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 KCNH5Q8NCM2 988 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 SSH3Q8TE77 659 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 ZDHHC9Q9Y397 364 aa9.34□□□□□ -0.91
NECAP1-224ENST00000640099 KLHDC4Q8TBB5 520 aa9.33□□□□□ -0.92
NECAP1-224ENST00000640099 GDPD2Q9HCC8 539 aa9.33□□□□□ -0.92
NECAP1-224ENST00000640099 CCDC9Q9Y3X0 531 aaKnown RBP9.33□□□□□ -0.92
NECAP1-224ENST00000640099 CSB-PGBD3P0DP91 1061 aa9.33□□□□□ -0.92
NECAP1-224ENST00000640099 MCCP23508 829 aa9.33□□□□□ -0.92
NECAP1-224ENST00000640099 FAM43AQ8N2R8 423 aa9.33□□□□□ -0.92
NECAP1-224ENST00000640099 NUCB2P80303 420 aa9.33□□□□□ -0.92
NECAP1-224ENST00000640099 ARHGEF25Q86VW2 580 aa9.33□□□□□ -0.92
NECAP1-224ENST00000640099 PXDNQ92626 1479 aa9.32□□□□□ -0.92
NECAP1-224ENST00000640099 NSFL1CQ9UNZ2 370 aaKnown RBP9.32□□□□□ -0.92
NECAP1-224ENST00000640099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-224ENST00000640099 SKOR2Q2VWA4 1001 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-224ENST00000640099 CCDC8Q9H0W5 538 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-224ENST00000640099 ADCY9O60503 1353 aa9.32□□□□□ -0.92
NECAP1-224ENST00000640099 CEMIPQ8WUJ3 1361 aa9.32□□□□□ -0.92
NECAP1-224ENST00000640099 GIGYF1O75420 1035 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-224ENST00000640099 KIF1BPQ96EK5 621 aa9.31□□□□□ -0.92
NECAP1-224ENST00000640099 LMBRD1Q9NUN5 540 aa9.31□□□□□ -0.92
NECAP1-224ENST00000640099 DBF4Q9UBU7 674 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-224ENST00000640099 PI4K2BQ8TCG2 481 aa9.31□□□□□ -0.92
NECAP1-224ENST00000640099 XRN1Q8IZH2 1706 aaKnown RBP9.31□□□□□ -0.92
NECAP1-224ENST00000640099 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
NECAP1-224ENST00000640099 STAP2Q9UGK3 403 aa9.31□□□□□ -0.92
NECAP1-224ENST00000640099 POLA2Q14181 598 aa9.3□□□□□ -0.92
NECAP1-224ENST00000640099 RIC3Q7Z5B4 369 aa9.3□□□□□ -0.92
NECAP1-224ENST00000640099 AACSQ86V21 672 aa9.3□□□□□ -0.92
NECAP1-224ENST00000640099 RASEFQ8IZ41 740 aa9.3□□□□□ -0.92
NECAP1-224ENST00000640099 SUCLG2Q96I99 432 aa9.3□□□□□ -0.92
NECAP1-224ENST00000640099 GPT2Q8TD30 523 aa9.3□□□□□ -0.92
NECAP1-224ENST00000640099 RAPGEF4Q8WZA2 1011 aa9.3□□□□□ -0.92
NECAP1-224ENST00000640099 TRIM44Q96DX7 344 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-224ENST00000640099 CYP2E1P05181 493 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-224ENST00000640099 IFIT2P09913 472 aaKnown RBP9.3□□□□□ -0.92
NECAP1-224ENST00000640099 KLHL40Q2TBA0 621 aa9.3□□□□□ -0.92
NECAP1-224ENST00000640099 CLASRPQ8N2M8 674 aaKnown RBP9.3□□□□□ -0.92
NECAP1-224ENST00000640099 NDUFB9Q9Y6M9 179 aa9.3□□□□□ -0.92
NECAP1-224ENST00000640099 RAB11FIP3O75154 756 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 AMOTQ4VCS5 1084 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 CNTROBQ8N137 903 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 BICC1Q9H694 974 aaKnown RBP9.29□□□□□ -0.92
NECAP1-224ENST00000640099 CWC22Q9HCG8 908 aaKnown RBP9.29□□□□□ -0.92
NECAP1-224ENST00000640099 DIAPH3Q9NSV4 1193 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
NECAP1-224ENST00000640099 NASPP49321 788 aaPredicted RBP9.29□□□□□ -0.92
NECAP1-224ENST00000640099 ZSCAN23Q3MJ62 389 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 KSR2Q6VAB6 950 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 KIAA1211Q6ZU35 1233 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 RNF214Q8ND24 703 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 BABAM1Q9NWV8 329 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 RGPD2P0DJD1 1756 aa9.29□□□□□ -0.92
NECAP1-224ENST00000640099 ADGRL3Q9HAR2 1447 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 ERBB4Q15303 1308 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 PTH1RQ03431 593 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 EDC3Q96F86 508 aaKnown RBP9.28□□□□□ -0.92
NECAP1-224ENST00000640099 MYD88Q99836 296 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 BOLA2Q9H3K6 86 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 FAM208AQ9UK61 1670 aaKnown RBP9.28□□□□□ -0.92
NECAP1-224ENST00000640099 SYCE3A1L190 88 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 PTCD1O75127 700 aaKnown RBP9.28□□□□□ -0.92
NECAP1-224ENST00000640099 KCNJ4P48050 445 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 XAGE3Q8WTP9 111 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 TCEANC2Q96MN5 208 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 SNX14Q9Y5W7 946 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 LTN1O94822 1766 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 MARF1Q9Y4F3 1742 aaKnown RBP9.28□□□□□ -0.92
NECAP1-224ENST00000640099 SGSM2O43147 1006 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 PRIM1P49642 420 aaKnown RBP9.28□□□□□ -0.92
NECAP1-224ENST00000640099 PRPF40BQ6NWY9 871 aaKnown RBP9.28□□□□□ -0.92
NECAP1-224ENST00000640099 COPS6Q7L5N1 327 aa9.28□□□□□ -0.92
NECAP1-224ENST00000640099 NFAT5O94916 1531 aa9.27□□□□□ -0.92
NECAP1-224ENST00000640099 CASTP20810 708 aaKnown RBP9.27□□□□□ -0.93
NECAP1-224ENST00000640099 COL9A3Q14050 684 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms