RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 EDC3Q96F86 508 aaKnown RBP9.3□□□□□ -0.92
NECAP1-221ENST00000639955 USP44Q9H0E7 712 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 TTC12Q9H892 705 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-221ENST00000639955 SOS1Q07889 1333 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-221ENST00000639955 MED14O60244 1454 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 PIK3R4Q99570 1358 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 SLC39A6Q13433 755 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 USP48Q86UV5 1035 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 SMC3Q9UQE7 1217 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 RIMS1Q86UR5 1692 aaKnown RBP9.3□□□□□ -0.92
NECAP1-221ENST00000639955 A0A0G2JS52 829 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 KCNA6P17658 529 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 TRHP20396 242 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-221ENST00000639955 ZC3H6P61129 1189 aaKnown RBP9.3□□□□□ -0.92
NECAP1-221ENST00000639955 BOLA2Q9H3K6 86 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 PSME1Q06323 249 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 RHPN1Q8TCX5 695 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 NCOA3Q9Y6Q9 1424 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 UQCRHLA0A096LP55 91 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 LARGE1O95461 756 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 UQCRHP07919 91 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 IFIT2P09913 472 aaKnown RBP9.29□□□□□ -0.92
NECAP1-221ENST00000639955 PROSER3Q2NL68 480 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 AACSQ86V21 672 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 LRRC2Q9BYS8 371 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 TMEM131LA2VDJ0 1609 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 CHGBP05060 677 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 AK2P54819 239 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 TSPY26PQ9H489 355 aa9.29□□□□□ -0.92
NECAP1-221ENST00000639955 TFIP11Q9UBB9 837 aaKnown RBP9.29□□□□□ -0.92
NECAP1-221ENST00000639955 PREX1Q8TCU6 1659 aa9.28□□□□□ -0.92
NECAP1-221ENST00000639955 COL9A3Q14050 684 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-221ENST00000639955 DLG5Q8TDM6 1919 aa9.28□□□□□ -0.92
NECAP1-221ENST00000639955 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-221ENST00000639955 BTBD11A6QL63 1104 aa9.28□□□□□ -0.92
NECAP1-221ENST00000639955 BRPF1P55201 1214 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-221ENST00000639955 ATP8B2P98198 1209 aa9.28□□□□□ -0.92
NECAP1-221ENST00000639955 CCDC85AQ96PX6 553 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-221ENST00000639955 CWC22Q9HCG8 908 aaKnown RBP9.28□□□□□ -0.92
NECAP1-221ENST00000639955 PTMSP20962 102 aa9.28□□□□□ -0.92
NECAP1-221ENST00000639955 HOXC9P31274 260 aa9.28□□□□□ -0.92
NECAP1-221ENST00000639955 DNM1Q05193 864 aaKnown RBP9.28□□□□□ -0.92
NECAP1-221ENST00000639955 ADCK5Q3MIX3 580 aa9.28□□□□□ -0.92
NECAP1-221ENST00000639955 CKAP2LQ8IYA6 745 aa9.28□□□□□ -0.92
NECAP1-221ENST00000639955 DDX11Q96FC9 970 aa9.28□□□□□ -0.92
NECAP1-221ENST00000639955 KNDC1Q76NI1 1749 aa9.27□□□□□ -0.92
NECAP1-221ENST00000639955 TNRQ92752 1358 aa9.27□□□□□ -0.92
NECAP1-221ENST00000639955 RGS12O14924 1447 aa9.27□□□□□ -0.92
NECAP1-221ENST00000639955 ATP7BP35670 1465 aa9.27□□□□□ -0.92
NECAP1-221ENST00000639955 DRC7Q8IY82 874 aa9.27□□□□□ -0.93
NECAP1-221ENST00000639955 DNAJC2Q99543 621 aaKnown RBP9.27□□□□□ -0.93
NECAP1-221ENST00000639955 MAP3K2Q9Y2U5 619 aa9.27□□□□□ -0.93
NECAP1-221ENST00000639955 CLTCQ00610 1675 aaKnown RBP9.27□□□□□ -0.93
NECAP1-221ENST00000639955 KIF20BQ96Q89 1820 aa9.27□□□□□ -0.93
NECAP1-221ENST00000639955 HSP90B1P14625 803 aaKnown RBP9.27□□□□□ -0.93
NECAP1-221ENST00000639955 PTH1RQ03431 593 aa9.27□□□□□ -0.93
NECAP1-221ENST00000639955 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.93
NECAP1-221ENST00000639955 NBPF4Q96M43 638 aa9.27□□□□□ -0.93
NECAP1-221ENST00000639955 FAM227BQ96M60 508 aa9.27□□□□□ -0.93
NECAP1-221ENST00000639955 CPSF1Q10570 1443 aaKnown RBP9.27□□□□□ -0.93
NECAP1-221ENST00000639955 NEO1Q92859 1461 aa9.27□□□□□ -0.93
NECAP1-221ENST00000639955 USP32Q8NFA0 1604 aa9.27□□□□□ -0.93
NECAP1-221ENST00000639955 CDK11BP21127 795 aaKnown RBP9.26□□□□□ -0.93
NECAP1-221ENST00000639955 LRSAM1Q6UWE0 723 aa9.26□□□□□ -0.93
NECAP1-221ENST00000639955 CLASRPQ8N2M8 674 aaKnown RBP9.26□□□□□ -0.93
NECAP1-221ENST00000639955 FSD1Q9BTV5 496 aa9.26□□□□□ -0.93
NECAP1-221ENST00000639955 GOLGA6L4A6NEF3 574 aa9.26□□□□□ -0.93
NECAP1-221ENST00000639955 CSB-PGBD3P0DP91 1061 aa9.26□□□□□ -0.93
NECAP1-221ENST00000639955 NCBP3Q53F19 620 aaKnown RBP9.26□□□□□ -0.93
NECAP1-221ENST00000639955 CNTROBQ8N137 903 aa9.26□□□□□ -0.93
NECAP1-221ENST00000639955 DNAAF4Q8WXU2 420 aa9.26□□□□□ -0.93
NECAP1-221ENST00000639955 DDX17Q92841 729 aaKnown RBP9.26□□□□□ -0.93
NECAP1-221ENST00000639955 FLT4P35916 1363 aa9.26□□□□□ -0.93
NECAP1-221ENST00000639955 A0A087WWV3 80 aa9.26□□□□□ -0.93
NECAP1-221ENST00000639955 RAB11FIP4Q86YS3 637 aa9.26□□□□□ -0.93
NECAP1-221ENST00000639955 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
NECAP1-221ENST00000639955 PTCD1O75127 700 aaKnown RBP9.25□□□□□ -0.93
NECAP1-221ENST00000639955 GJB2P29033 226 aa9.25□□□□□ -0.93
NECAP1-221ENST00000639955 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
NECAP1-221ENST00000639955 C1orf141Q5JVX7 400 aa9.25□□□□□ -0.93
NECAP1-221ENST00000639955 TLR7Q9NYK1 1049 aaKnown RBP9.25□□□□□ -0.93
NECAP1-221ENST00000639955 SNX14Q9Y5W7 946 aa9.25□□□□□ -0.93
NECAP1-221ENST00000639955 ARHGAP31Q2M1Z3 1444 aa9.25□□□□□ -0.93
NECAP1-221ENST00000639955 SYT1P21579 422 aa9.25□□□□□ -0.93
NECAP1-221ENST00000639955 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-221ENST00000639955 RIC3Q7Z5B4 369 aa9.25□□□□□ -0.93
NECAP1-221ENST00000639955 SYAP1Q96A49 352 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-221ENST00000639955 NLRP2Q9NX02 1062 aa9.25□□□□□ -0.93
NECAP1-221ENST00000639955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.25□□□□□ -0.93
NECAP1-221ENST00000639955 KAT6BQ8WYB5 2073 aa9.24□□□□□ -0.93
NECAP1-221ENST00000639955 MBD3O95983 291 aa9.24□□□□□ -0.93
NECAP1-221ENST00000639955 CYP2E1P05181 493 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-221ENST00000639955 ZNF445P59923 1031 aa9.24□□□□□ -0.93
NECAP1-221ENST00000639955 GUCY1B3Q02153 619 aa9.24□□□□□ -0.93
NECAP1-221ENST00000639955 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-221ENST00000639955 PDRG1Q9NUG6 133 aa9.24□□□□□ -0.93
NECAP1-221ENST00000639955 TAF6LQ9Y6J9 622 aa9.24□□□□□ -0.93
NECAP1-221ENST00000639955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-221ENST00000639955 STX6O43752 255 aa9.24□□□□□ -0.93
NECAP1-221ENST00000639955 RAB11FIP3O75154 756 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms