RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	ZMYM4	Q5VZL5	1548 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	DUOX2	Q9NRD8	1548 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	EVC	P57679	992 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	TSHZ3	Q63HK5	1081 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	CYP46A1	Q9Y6A2	500 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	TRIM66	O15016	1216 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	GNAI1	P63096	354 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	TWISTNB	Q3B726	338 aa	Predicted RBP	13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	RNF187	Q5TA31	235 aa	Predicted RBP	13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	ZSCAN25	Q6NSZ9	544 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	CAGE1	Q8TC20	777 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	SRCIN1	Q9C0H9	1055 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	A2M	P01023	1474 aa		13.26	□□□□□ -0.29
SPIN3-231	ENST00000639895	ZSCAN12	O43309	604 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	DTNB	O60941	627 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	JAKMIP1	Q96N16	626 aa	Known RBP	13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	ZBTB40	Q9NUA8	1239 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	USP16	Q9Y5T5	823 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	CEP170	Q5SW79	1584 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	ANKRD65	E5RJM6	399 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	EXOC6B	Q9Y2D4	811 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	DHX16	O60231	1041 aa	Known RBP	13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	DHX8	Q14562	1220 aa	Known RBP	13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	LRCH2	Q5VUJ6	765 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	CEP57	Q86XR8	500 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	GBP3	Q9H0R5	595 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	GGNBP2	Q9H3C7	697 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	NRBP1	Q9UHY1	535 aa		13.25	□□□□□ -0.29
SPIN3-231	ENST00000639895	AKAP17A	Q02040	695 aa	Known RBP	13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	KMT5B	Q4FZB7	885 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	ANO10	Q9NW15	660 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	LIG1	P18858	919 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	GJB2	P29033	226 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	PPP2R5A	Q15172	486 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	KIF4B	Q2VIQ3	1234 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	CARD6	Q9BX69	1037 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	PDRG1	Q9NUG6	133 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	LIMCH1	Q9UPQ0	1083 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	TMPO	P42166	694 aa	Known RBP	13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	TSR1	Q2NL82	804 aa	Known RBP	13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	PLPPR3	Q6T4P5	718 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	RPAIN	Q86UA6	219 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	ANKRD7	Q92527	254 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	NCAPG	Q9BPX3	1015 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	CABP2	Q9NPB3	220 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	BLM	P54132	1417 aa	Predicted RBP	13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	BRD1	O95696	1058 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	ABCC10	Q5T3U5	1492 aa		13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
SPIN3-231	ENST00000639895	ZNF75D	P51815	510 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	BRMS1	Q9HCU9	246 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	NSD3	Q9BZ95	1437 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	EBAG9	O00559	213 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	F13A1	P00488	732 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	OLFM4	Q6UX06	510 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	SPTLC3	Q9NUV7	552 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	RNF216	Q9NWF9	866 aa	Predicted RBP	13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	GYS2	P54840	703 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	GOLGA5	Q8TBA6	731 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	NECTIN2	Q92692	538 aa		13.23	□□□□□ -0.29
SPIN3-231	ENST00000639895	ADGRF5	Q8IZF2	1346 aa		13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	SSR1	P43307	286 aa	Known RBP	13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	PPP6R1	Q9UPN7	881 aa		13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	SYCP1	Q15431	976 aa		13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	THUMPD2	Q9BTF0	503 aa	Known RBP	13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	CBX8	Q9HC52	389 aa		13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	ASXL1	Q8IXJ9	1541 aa		13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	IPO7	O95373	1038 aa	Known RBP	13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	MLEC	Q14165	292 aa		13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	ISM2	Q6H9L7	571 aa		13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	PLCH2	O75038	1416 aa		13.22	□□□□□ -0.29
SPIN3-231	ENST00000639895	NEBL	O76041	1014 aa		13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	BRPF1	P55201	1214 aa	Predicted RBP	13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	CWC27	Q6UX04	472 aa	Known RBP	13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	NBPF11	Q86T75	865 aa		13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	RABEP2	Q9H5N1	569 aa		13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	DNAJC21	Q5F1R6	531 aa	Known RBP	13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	IL1RAPL2	Q9NP60	686 aa		13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	BIN1	O00499	593 aa		13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	GBP2	P32456	591 aa	Predicted RBP	13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.21	□□□□□ -0.29
SPIN3-231	ENST00000639895	ANKRD36B	Q8N2N9	1353 aa		13.21	□□□□□ -0.3
SPIN3-231	ENST00000639895	SEC31A	O94979	1220 aa	Known RBP	13.21	□□□□□ -0.3
SPIN3-231	ENST00000639895	SYT1	P21579	422 aa		13.21	□□□□□ -0.3
SPIN3-231	ENST00000639895	PRKAR2B	P31323	418 aa		13.21	□□□□□ -0.3
SPIN3-231	ENST00000639895	ZCCHC17	Q9NP64	241 aa	Known RBP	13.21	□□□□□ -0.3
SPIN3-231	ENST00000639895	CFAP45	Q9UL16	551 aa		13.21	□□□□□ -0.3
SPIN3-231	ENST00000639895	STX1A	Q16623	288 aa		13.2	□□□□□ -0.3
SPIN3-231	ENST00000639895	SYNE3	Q6ZMZ3	975 aa		13.2	□□□□□ -0.3
SPIN3-231	ENST00000639895	PLEKHM2	Q8IWE5	1019 aa		13.2	□□□□□ -0.3
SPIN3-231	ENST00000639895	CNTROB	Q8N137	903 aa		13.2	□□□□□ -0.3
SPIN3-231	ENST00000639895	INTS4	Q96HW7	963 aa	Known RBP	13.2	□□□□□ -0.3
SPIN3-231	ENST00000639895	ARHGEF5	Q12774	1597 aa		13.2	□□□□□ -0.3
SPIN3-231	ENST00000639895	STK38	Q15208	465 aa		13.2	□□□□□ -0.3
SPIN3-231	ENST00000639895	ZMYM3	Q14202	1370 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms