RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 ZPR1O75312 459 aa12.6□□□□□ -0.39
TRIO-225ENST00000639876 STARD3NLO95772 234 aa12.6□□□□□ -0.39
TRIO-225ENST00000639876 C1QTNF8P60827 252 aa12.6□□□□□ -0.39
TRIO-225ENST00000639876 TEFQ10587 303 aa12.6□□□□□ -0.39
TRIO-225ENST00000639876 CC2D1BQ5T0F9 858 aaKnown RBP12.6□□□□□ -0.39
TRIO-225ENST00000639876 ARHGEF1Q92888 912 aaKnown RBP12.6□□□□□ -0.39
TRIO-225ENST00000639876 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
TRIO-225ENST00000639876 TJP1Q07157 1748 aa12.59□□□□□ -0.39
TRIO-225ENST00000639876 A0A087WZG4 1122 aa12.59□□□□□ -0.39
TRIO-225ENST00000639876 GYS1P13807 737 aa12.59□□□□□ -0.39
TRIO-225ENST00000639876 YBX3P16989 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIO-225ENST00000639876 PDZRN3Q9UPQ7 1066 aa12.59□□□□□ -0.39
TRIO-225ENST00000639876 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
TRIO-225ENST00000639876 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.4
TRIO-225ENST00000639876 PXDNLA1KZ92 1463 aa12.58□□□□□ -0.4
TRIO-225ENST00000639876 COL3A1P02461 1466 aaPredicted RBP12.58□□□□□ -0.4
TRIO-225ENST00000639876 VIRMAQ69YN4 1812 aaKnown RBP12.58□□□□□ -0.4
TRIO-225ENST00000639876 ADCY9O60503 1353 aa12.57□□□□□ -0.4
TRIO-225ENST00000639876 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
TRIO-225ENST00000639876 U2SURPO15042 1029 aaKnown RBP12.57□□□□□ -0.4
TRIO-225ENST00000639876 HMOX1P09601 288 aa12.57□□□□□ -0.4
TRIO-225ENST00000639876 SLC4A9Q96Q91 983 aa12.57□□□□□ -0.4
TRIO-225ENST00000639876 PNNQ9H307 717 aaKnown RBP12.57□□□□□ -0.4
TRIO-225ENST00000639876 ATP10DQ9P241 1426 aa12.56□□□□□ -0.4
TRIO-225ENST00000639876 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
TRIO-225ENST00000639876 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
TRIO-225ENST00000639876 COL15A1P39059 1388 aa12.56□□□□□ -0.4
TRIO-225ENST00000639876 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
TRIO-225ENST00000639876 AMIGO3Q86WK7 504 aa12.55□□□□□ -0.4
TRIO-225ENST00000639876 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
TRIO-225ENST00000639876 PIM2Q9P1W9 311 aa12.55□□□□□ -0.4
TRIO-225ENST00000639876 MYH14Q7Z406 1995 aaKnown RBP12.55□□□□□ -0.4
TRIO-225ENST00000639876 KCPQ6ZWJ8 1503 aa12.55□□□□□ -0.4
TRIO-225ENST00000639876 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
TRIO-225ENST00000639876 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
TRIO-225ENST00000639876 RGL2O15211 777 aa12.54□□□□□ -0.4
TRIO-225ENST00000639876 FCHSD2O94868 740 aa12.54□□□□□ -0.4
TRIO-225ENST00000639876 CYP19A1P11511 503 aaPredicted RBP12.54□□□□□ -0.4
TRIO-225ENST00000639876 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
TRIO-225ENST00000639876 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
TRIO-225ENST00000639876 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
TRIO-225ENST00000639876 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
TRIO-225ENST00000639876 INTS5Q6P9B9 1019 aaKnown RBP12.53□□□□□ -0.4
TRIO-225ENST00000639876 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
TRIO-225ENST00000639876 BCS1LQ9Y276 419 aa12.53□□□□□ -0.4
TRIO-225ENST00000639876 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
TRIO-225ENST00000639876 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
TRIO-225ENST00000639876 KIAA1551Q9HCM1 1747 aa12.52□□□□□ -0.41
TRIO-225ENST00000639876 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.41
TRIO-225ENST00000639876 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.41
TRIO-225ENST00000639876 SIPA1L3O60292 1781 aaPredicted RBP12.51□□□□□ -0.41
TRIO-225ENST00000639876 IL6STP40189 918 aaPredicted RBP12.51□□□□□ -0.41
TRIO-225ENST00000639876 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
TRIO-225ENST00000639876 POLRMTO00411 1230 aaKnown RBP12.5□□□□□ -0.41
TRIO-225ENST00000639876 TM4SF1P30408 202 aa12.5□□□□□ -0.41
TRIO-225ENST00000639876 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
TRIO-225ENST00000639876 FKBP8Q14318 412 aa12.5□□□□□ -0.41
TRIO-225ENST00000639876 PNISRQ8TF01 805 aaKnown RBP12.5□□□□□ -0.41
TRIO-225ENST00000639876 ZNF652Q9Y2D9 606 aa12.5□□□□□ -0.41
TRIO-225ENST00000639876 KDM2BQ8NHM5 1336 aa12.5□□□□□ -0.41
TRIO-225ENST00000639876 SCN7AQ01118 1682 aa12.5□□□□□ -0.41
TRIO-225ENST00000639876 NRXN2Q9P2S2 1712 aa12.5□□□□□ -0.41
TRIO-225ENST00000639876 N4BP2Q86UW6 1770 aaPredicted RBP12.5□□□□□ -0.41
TRIO-225ENST00000639876 CARMIL3Q8ND23 1372 aa12.49□□□□□ -0.41
TRIO-225ENST00000639876 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
TRIO-225ENST00000639876 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
TRIO-225ENST00000639876 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
TRIO-225ENST00000639876 DPEP1P16444 411 aa12.49□□□□□ -0.41
TRIO-225ENST00000639876 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRIO-225ENST00000639876 USPL1Q5W0Q7 1092 aa12.49□□□□□ -0.41
TRIO-225ENST00000639876 RSPH6AQ9H0K4 717 aa12.49□□□□□ -0.41
TRIO-225ENST00000639876 ZBTB1Q9Y2K1 713 aa12.49□□□□□ -0.41
TRIO-225ENST00000639876 A0A0G2JLW4 131 aa12.48□□□□□ -0.41
TRIO-225ENST00000639876 PPP2R1AP30153 589 aa12.48□□□□□ -0.41
TRIO-225ENST00000639876 PDE6BP35913 854 aa12.48□□□□□ -0.41
TRIO-225ENST00000639876 EIF5P55010 431 aaKnown RBP12.48□□□□□ -0.41
TRIO-225ENST00000639876 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
TRIO-225ENST00000639876 SOGA3Q5TF21 947 aa12.48□□□□□ -0.41
TRIO-225ENST00000639876 ARHGAP27Q6ZUM4 889 aa12.48□□□□□ -0.41
TRIO-225ENST00000639876 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
TRIO-225ENST00000639876 NPHP1O15259 732 aa12.47□□□□□ -0.41
TRIO-225ENST00000639876 CLEC4GQ6UXB4 293 aa12.47□□□□□ -0.41
TRIO-225ENST00000639876 SMIM5Q71RC9 77 aa12.47□□□□□ -0.41
TRIO-225ENST00000639876 SRP68Q9UHB9 627 aaKnown RBP12.47□□□□□ -0.41
TRIO-225ENST00000639876 H0YIN7 160 aa12.46□□□□□ -0.41
TRIO-225ENST00000639876 SERPINB2P05120 415 aa12.46□□□□□ -0.41
TRIO-225ENST00000639876 SNRPA1P09661 255 aaKnown RBP12.46□□□□□ -0.41
TRIO-225ENST00000639876 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
TRIO-225ENST00000639876 ST5P78524 1137 aa12.46□□□□□ -0.41
TRIO-225ENST00000639876 DDR1Q08345 913 aa12.46□□□□□ -0.41
TRIO-225ENST00000639876 NFIXQ14938 502 aa12.46□□□□□ -0.41
TRIO-225ENST00000639876 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.41
TRIO-225ENST00000639876 IL17REQ8NFR9 667 aa12.46□□□□□ -0.41
TRIO-225ENST00000639876 ZNF496Q96IT1 587 aaPredicted RBP12.46□□□□□ -0.41
TRIO-225ENST00000639876 MAPK8IP3Q9UPT6 1336 aa12.45□□□□□ -0.42
TRIO-225ENST00000639876 TOMM70O94826 608 aa12.45□□□□□ -0.42
TRIO-225ENST00000639876 HSPA6P17066 643 aa12.45□□□□□ -0.42
TRIO-225ENST00000639876 TTLL6Q8N841 843 aa12.45□□□□□ -0.42
TRIO-225ENST00000639876 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
TRIO-225ENST00000639876 LMOD3Q0VAK6 560 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms