RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 LAMB4A4D0S4 1761 aa23.44■■□□□ 1.34
PTPN11-207ENST00000639857 KIAA1551Q9HCM1 1747 aa23.43■■□□□ 1.34
PTPN11-207ENST00000639857 ZBTB1Q9Y2K1 713 aa23.43■■□□□ 1.34
PTPN11-207ENST00000639857 SCN7AQ01118 1682 aa23.42■■□□□ 1.34
PTPN11-207ENST00000639857 GPR162Q16538 588 aa23.42■■□□□ 1.34
PTPN11-207ENST00000639857 C10orf71Q711Q0 1435 aa23.42■■□□□ 1.34
PTPN11-207ENST00000639857 TAF7Q15545 349 aaPredicted RBP23.41■■□□□ 1.34
PTPN11-207ENST00000639857 ZPR1O75312 459 aa23.4■■□□□ 1.34
PTPN11-207ENST00000639857 YY1P25490 414 aa23.4■■□□□ 1.34
PTPN11-207ENST00000639857 DCTN1Q14203 1278 aa23.4■■□□□ 1.34
PTPN11-207ENST00000639857 PNISRQ8TF01 805 aaKnown RBP23.4■■□□□ 1.34
PTPN11-207ENST00000639857 NARFQ9UHQ1 456 aa23.4■■□□□ 1.34
PTPN11-207ENST00000639857 UTRNP46939 3433 aa23.39■■□□□ 1.34
PTPN11-207ENST00000639857 A0A087WZG4 1122 aa23.39■■□□□ 1.33
PTPN11-207ENST00000639857 SRP68Q9UHB9 627 aaKnown RBP23.39■■□□□ 1.33
PTPN11-207ENST00000639857 PARP3Q9Y6F1 533 aa23.39■■□□□ 1.33
PTPN11-207ENST00000639857 NRXN2Q9P2S2 1712 aa23.39■■□□□ 1.33
PTPN11-207ENST00000639857 GOLGB1Q14789 3259 aaKnown RBP23.39■■□□□ 1.33
PTPN11-207ENST00000639857 BRCA1P38398 1863 aaKnown RBP23.39■■□□□ 1.33
PTPN11-207ENST00000639857 KCNQ3O43525 872 aa23.38■■□□□ 1.33
PTPN11-207ENST00000639857 EIF5P55010 431 aaKnown RBP23.38■■□□□ 1.33
PTPN11-207ENST00000639857 BCORQ6W2J9 1755 aa23.37■■□□□ 1.33
PTPN11-207ENST00000639857 GRIN3BO60391 1043 aa23.37■■□□□ 1.33
PTPN11-207ENST00000639857 SNRPA1P09661 255 aaKnown RBP23.37■■□□□ 1.33
PTPN11-207ENST00000639857 IL6STP40189 918 aaPredicted RBP23.37■■□□□ 1.33
PTPN11-207ENST00000639857 FKBP8Q14318 412 aa23.37■■□□□ 1.33
PTPN11-207ENST00000639857 WDR43Q15061 677 aaKnown RBP eCLIP23.37■■□□□ 1.33
PTPN11-207ENST00000639857 AFDNP55196 1824 aaKnown RBP23.37■■□□□ 1.33
PTPN11-207ENST00000639857 CANXP27824 592 aaKnown RBP23.36■■□□□ 1.33
PTPN11-207ENST00000639857 LMOD3Q0VAK6 560 aa23.36■■□□□ 1.33
PTPN11-207ENST00000639857 N4BP2Q86UW6 1770 aaPredicted RBP23.36■■□□□ 1.33
PTPN11-207ENST00000639857 PXDNLA1KZ92 1463 aa23.36■■□□□ 1.33
PTPN11-207ENST00000639857 TGFB2P61812 414 aa23.35■■□□□ 1.33
PTPN11-207ENST00000639857 USPL1Q5W0Q7 1092 aa23.35■■□□□ 1.33
PTPN11-207ENST00000639857 TM4SF1P30408 202 aa23.34■■□□□ 1.33
PTPN11-207ENST00000639857 PELP1Q8IZL8 1130 aaKnown RBP23.34■■□□□ 1.33
PTPN11-207ENST00000639857 YBX3P16989 372 aaKnown RBP eCLIP23.33■■□□□ 1.332e-8■□□□□ 10.6
PTPN11-207ENST00000639857 ZNF316A6NFI3 1004 aaPredicted RBP23.32■■□□□ 1.32
PTPN11-207ENST00000639857 TMPOP42166 694 aaKnown RBP23.32■■□□□ 1.32
PTPN11-207ENST00000639857 DDR1Q08345 913 aa23.32■■□□□ 1.32
PTPN11-207ENST00000639857 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
PTPN11-207ENST00000639857 RUNDC1Q96C34 613 aa23.32■■□□□ 1.32
PTPN11-207ENST00000639857 POLRMTO00411 1230 aaKnown RBP23.31■■□□□ 1.32
PTPN11-207ENST00000639857 RIPK4P57078 832 aa23.31■■□□□ 1.32
PTPN11-207ENST00000639857 BABAM1Q9NWV8 329 aa23.31■■□□□ 1.32
PTPN11-207ENST00000639857 A1BGP04217 495 aa23.3■■□□□ 1.32
PTPN11-207ENST00000639857 BCL2L12Q9HB09 334 aa23.3■■□□□ 1.32
PTPN11-207ENST00000639857 USP16Q9Y5T5 823 aa23.3■■□□□ 1.32
PTPN11-207ENST00000639857 ARFGEF1Q9Y6D6 1849 aa23.3■■□□□ 1.32
PTPN11-207ENST00000639857 NFIXQ14938 502 aa23.29■■□□□ 1.32
PTPN11-207ENST00000639857 DLEC1Q9Y238 1755 aa23.29■■□□□ 1.32
PTPN11-207ENST00000639857 RGL2O15211 777 aa23.28■■□□□ 1.32
PTPN11-207ENST00000639857 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
PTPN11-207ENST00000639857 ADAMTS8Q9UP79 889 aa23.28■■□□□ 1.32
PTPN11-207ENST00000639857 PRAMEF22A3QJZ6 481 aa23.26■■□□□ 1.31
PTPN11-207ENST00000639857 EIF4A1P60842 406 aaKnown RBP23.26■■□□□ 1.31
PTPN11-207ENST00000639857 CCDC146Q8IYE0 955 aa23.26■■□□□ 1.31
PTPN11-207ENST00000639857 MIS18AQ9NYP9 233 aa23.26■■□□□ 1.31
PTPN11-207ENST00000639857 GIGYF1O75420 1035 aaPredicted RBP23.25■■□□□ 1.31
PTPN11-207ENST00000639857 ZNF330Q9Y3S2 320 aaPredicted RBP23.25■■□□□ 1.31
PTPN11-207ENST00000639857 CAMTA2O94983 1202 aa23.24■■□□□ 1.31
PTPN11-207ENST00000639857 TBC1D2BQ9UPU7 963 aa23.24■■□□□ 1.31
PTPN11-207ENST00000639857 CARMIL3Q8ND23 1372 aa23.24■■□□□ 1.31
PTPN11-207ENST00000639857 DZIP3Q86Y13 1208 aaKnown RBP23.23■■□□□ 1.31
PTPN11-207ENST00000639857 TSPYL4Q9UJ04 414 aa23.23■■□□□ 1.31
PTPN11-207ENST00000639857 A0A0G2JLW4 131 aa23.22■■□□□ 1.31
PTPN11-207ENST00000639857 SERPINB2P05120 415 aa23.22■■□□□ 1.31
PTPN11-207ENST00000639857 DPEP1P16444 411 aa23.22■■□□□ 1.31
PTPN11-207ENST00000639857 CLEC4GQ6UXB4 293 aa23.22■■□□□ 1.31
PTPN11-207ENST00000639857 ERBB4Q15303 1308 aa23.22■■□□□ 1.31
PTPN11-207ENST00000639857 ANKRD31Q8N7Z5 1873 aa23.22■■□□□ 1.31
PTPN11-207ENST00000639857 NBPF26B4DH59 902 aa23.21■■□□□ 1.31
PTPN11-207ENST00000639857 NBPF10Q6P3W6 841 aaKnown RBP23.21■■□□□ 1.31
PTPN11-207ENST00000639857 NBPF15Q8N660 670 aa23.21■■□□□ 1.31
PTPN11-207ENST00000639857 ZNF652Q9Y2D9 606 aa23.21■■□□□ 1.31
PTPN11-207ENST00000639857 TBC1D9BQ66K14 1250 aa23.2■■□□□ 1.3
PTPN11-207ENST00000639857 TRIM35Q9UPQ4 493 aa23.2■■□□□ 1.3
PTPN11-207ENST00000639857 RRP7AQ9Y3A4 280 aaKnown RBP23.2■■□□□ 1.3
PTPN11-207ENST00000639857 KCNA3P22001 575 aa23.19■■□□□ 1.3
PTPN11-207ENST00000639857 ZNF784Q8NCA9 323 aaPredicted RBP23.19■■□□□ 1.3
PTPN11-207ENST00000639857 PIM2Q9P1W9 311 aa23.19■■□□□ 1.3
PTPN11-207ENST00000639857 NUP98P52948 1817 aa23.19■■□□□ 1.3
PTPN11-207ENST00000639857 PIP4K2AP48426 406 aaPredicted RBP23.18■■□□□ 1.3
PTPN11-207ENST00000639857 NEUROD2Q15784 382 aa23.18■■□□□ 1.3
PTPN11-207ENST00000639857 PDZRN3Q9UPQ7 1066 aa23.18■■□□□ 1.3
PTPN11-207ENST00000639857 ANP32CO43423 234 aa23.17■■□□□ 1.3
PTPN11-207ENST00000639857 SETDB2Q96T68 719 aa23.17■■□□□ 1.3
PTPN11-207ENST00000639857 BCS1LQ9Y276 419 aa23.17■■□□□ 1.3
PTPN11-207ENST00000639857 CHL1O00533 1208 aa23.16■■□□□ 1.3
PTPN11-207ENST00000639857 BICDL1Q6ZP65 573 aa23.16■■□□□ 1.3
PTPN11-207ENST00000639857 WWC3Q9ULE0 1092 aa23.15■■□□□ 1.3
PTPN11-207ENST00000639857 ADCY9O60503 1353 aa23.14■■□□□ 1.3
PTPN11-207ENST00000639857 COL11A2P13942 1736 aaPredicted RBP23.14■■□□□ 1.3
PTPN11-207ENST00000639857 DALRD3Q5D0E6 543 aaKnown RBP23.14■■□□□ 1.29
PTPN11-207ENST00000639857 ERVV-1B6SEH8 477 aa23.13■■□□□ 1.29
PTPN11-207ENST00000639857 CALD1Q05682 793 aaKnown RBP23.13■■□□□ 1.29
PTPN11-207ENST00000639857 CNBD1Q8NA66 436 aa23.13■■□□□ 1.29
PTPN11-207ENST00000639857 BRIP1Q9BX63 1249 aa23.13■■□□□ 1.29
PTPN11-207ENST00000639857 ARFGEF2Q9Y6D5 1785 aa23.13■■□□□ 1.29
PTPN11-207ENST00000639857 APAF1O14727 1248 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms