RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 NBPF7P0C2Y1 421 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-219ENST00000639811 RBM25P49756 843 aaKnown RBP12.19□□□□□ -0.46
NECAP1-219ENST00000639811 DCAF5Q96JK2 942 aa12.19□□□□□ -0.46
NECAP1-219ENST00000639811 COL5A2P05997 1499 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-219ENST00000639811 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-219ENST00000639811 NHSL1Q5SYE7 1610 aa12.18□□□□□ -0.46
NECAP1-219ENST00000639811 SSH3Q8TE77 659 aa12.18□□□□□ -0.46
NECAP1-219ENST00000639811 ZNF496Q96IT1 587 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-219ENST00000639811 DDX21Q9NR30 783 aaKnown RBP eCLIP12.18□□□□□ -0.46
NECAP1-219ENST00000639811 MAP3K2Q9Y2U5 619 aa12.18□□□□□ -0.46
NECAP1-219ENST00000639811 SALL3Q9BXA9 1300 aa12.17□□□□□ -0.46
NECAP1-219ENST00000639811 KSR2Q6VAB6 950 aa12.17□□□□□ -0.46
NECAP1-219ENST00000639811 TOM1L2Q6ZVM7 507 aa12.17□□□□□ -0.46
NECAP1-219ENST00000639811 HYPKQ9NX55 129 aa12.17□□□□□ -0.46
NECAP1-219ENST00000639811 SDSP20132 328 aa12.16□□□□□ -0.46
NECAP1-219ENST00000639811 PDE1AP54750 535 aa12.16□□□□□ -0.46
NECAP1-219ENST00000639811 POLA2Q14181 598 aa12.16□□□□□ -0.46
NECAP1-219ENST00000639811 PPP1R42Q7Z4L9 355 aa12.16□□□□□ -0.46
NECAP1-219ENST00000639811 LRRCC1Q9C099 1032 aa12.16□□□□□ -0.46
NECAP1-219ENST00000639811 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
NECAP1-219ENST00000639811 PARP4Q9UKK3 1724 aaKnown RBP12.16□□□□□ -0.46
NECAP1-219ENST00000639811 HSP90AB1P08238 724 aaKnown RBP12.16□□□□□ -0.46
NECAP1-219ENST00000639811 KIF2CQ99661 725 aa12.15□□□□□ -0.46
NECAP1-219ENST00000639811 ALDH1L1O75891 902 aa12.15□□□□□ -0.47
NECAP1-219ENST00000639811 AIMP1Q12904 312 aaKnown RBP12.15□□□□□ -0.47
NECAP1-219ENST00000639811 CWF19L2Q2TBE0 894 aaKnown RBP12.15□□□□□ -0.47
NECAP1-219ENST00000639811 USP16Q9Y5T5 823 aa12.15□□□□□ -0.47
NECAP1-219ENST00000639811 GLI3P10071 1580 aa12.14□□□□□ -0.47
NECAP1-219ENST00000639811 CABP4P57796 275 aa12.14□□□□□ -0.47
NECAP1-219ENST00000639811 TSHZ3Q63HK5 1081 aa12.14□□□□□ -0.47
NECAP1-219ENST00000639811 LARP1Q6PKG0 1096 aaKnown RBP12.14□□□□□ -0.47
NECAP1-219ENST00000639811 ZCRB1Q8TBF4 217 aaKnown RBP12.14□□□□□ -0.47
NECAP1-219ENST00000639811 CARD10Q9BWT7 1032 aa12.14□□□□□ -0.47
NECAP1-219ENST00000639811 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 MYL6BP14649 208 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
NECAP1-219ENST00000639811 LRP10Q7Z4F1 713 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 TTC5Q8N0Z6 440 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 ANTXR1Q9H6X2 564 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 PCDH11YQ9BZA8 1340 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 TUBGCP6Q96RT7 1819 aa12.13□□□□□ -0.47
NECAP1-219ENST00000639811 SNRPA1P09661 255 aaKnown RBP12.13□□□□□ -0.47
NECAP1-219ENST00000639811 SHANK3Q9BYB0 1731 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
NECAP1-219ENST00000639811 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
NECAP1-219ENST00000639811 MX1P20591 662 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 FMNL2Q96PY5 1086 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 SLKQ9H2G2 1235 aaPredicted RBP12.12□□□□□ -0.47
NECAP1-219ENST00000639811 IGKV5-2P06315 115 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 IL2RBP14784 551 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 PIP4K2AP48426 406 aaPredicted RBP12.12□□□□□ -0.47
NECAP1-219ENST00000639811 MTX1Q13505 466 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 C9orf78Q9NZ63 289 aaPredicted RBP12.12□□□□□ -0.47
NECAP1-219ENST00000639811 USP35Q9P2H5 1018 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
NECAP1-219ENST00000639811 RAB11FIP3O75154 756 aa12.11□□□□□ -0.47
NECAP1-219ENST00000639811 COPS6Q7L5N1 327 aa12.11□□□□□ -0.47
NECAP1-219ENST00000639811 UTYO14607 1347 aa12.11□□□□□ -0.47
NECAP1-219ENST00000639811 EVA1CP58658 441 aa12.11□□□□□ -0.47
NECAP1-219ENST00000639811 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
NECAP1-219ENST00000639811 RIC3Q7Z5B4 369 aa12.11□□□□□ -0.47
NECAP1-219ENST00000639811 RHPN1Q8TCX5 695 aa12.11□□□□□ -0.47
NECAP1-219ENST00000639811 KAZALD1Q96I82 304 aa12.11□□□□□ -0.47
NECAP1-219ENST00000639811 GRM8O00222 908 aa12.1□□□□□ -0.47
NECAP1-219ENST00000639811 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
NECAP1-219ENST00000639811 SNX21Q969T3 373 aa12.1□□□□□ -0.47
NECAP1-219ENST00000639811 USP26Q9BXU7 913 aa12.1□□□□□ -0.47
NECAP1-219ENST00000639811 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
NECAP1-219ENST00000639811 NUTM1Q86Y26 1132 aa12.09□□□□□ -0.47
NECAP1-219ENST00000639811 DDX54Q8TDD1 881 aaKnown RBP12.09□□□□□ -0.47
NECAP1-219ENST00000639811 SUCLG2Q96I99 432 aa12.09□□□□□ -0.47
NECAP1-219ENST00000639811 LAMB4A4D0S4 1761 aa12.09□□□□□ -0.47
NECAP1-219ENST00000639811 NEURL1BA8MQ27 555 aa12.09□□□□□ -0.47
NECAP1-219ENST00000639811 HSCBQ8IWL3 235 aa12.09□□□□□ -0.47
NECAP1-219ENST00000639811 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
NECAP1-219ENST00000639811 METTL22Q9BUU2 404 aaPredicted RBP12.09□□□□□ -0.47
NECAP1-219ENST00000639811 UBR2Q8IWV8 1755 aa12.08□□□□□ -0.47
NECAP1-219ENST00000639811 PAPPAQ13219 1627 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 FRAT2O75474 233 aaPredicted RBP12.08□□□□□ -0.48
NECAP1-219ENST00000639811 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
NECAP1-219ENST00000639811 CASC1Q6TDU7 716 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 KIF1BPQ96EK5 621 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 MYD88Q99836 296 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 KCPQ6ZWJ8 1503 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 ROBO1Q9Y6N7 1651 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 AOX1Q06278 1338 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.48
NECAP1-219ENST00000639811 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 UNC5CLQ8IV45 518 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
NECAP1-219ENST00000639811 BTG4Q9NY30 223 aa12.08□□□□□ -0.48
NECAP1-219ENST00000639811 PA2G4Q9UQ80 394 aaKnown RBP12.08□□□□□ -0.48
NECAP1-219ENST00000639811 TOGARAM1Q9Y4F4 1720 aa12.07□□□□□ -0.48
NECAP1-219ENST00000639811 NBPF26B4DH59 902 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms