RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 KAT6BQ8WYB5 2073 aa17.02■□□□□ 0.31
SCARB2-216ENST00000639300 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
SCARB2-216ENST00000639300 CEP85Q6P2H3 762 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 BICDL1Q6ZP65 573 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 KDM2BQ8NHM5 1336 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 STARD3NLO95772 234 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
SCARB2-216ENST00000639300 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
SCARB2-216ENST00000639300 LRP2BPQ9P2M1 347 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 CFAP65Q6ZU64 1925 aaKnown RBP17.01■□□□□ 0.31
SCARB2-216ENST00000639300 NPC1L1Q9UHC9 1359 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 CCDC69A6NI79 296 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 SERPINC1P01008 464 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 GPTP24298 496 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 GNL3LQ9NVN8 582 aaKnown RBP17.01■□□□□ 0.31
SCARB2-216ENST00000639300 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
SCARB2-216ENST00000639300 IMMTQ16891 758 aaKnown RBP17■□□□□ 0.31
SCARB2-216ENST00000639300 G2E3Q7L622 706 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
SCARB2-216ENST00000639300 CCT2P78371 535 aaKnown RBP17■□□□□ 0.31
SCARB2-216ENST00000639300 PLEKHM2Q8IWE5 1019 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 EVI5LQ96CN4 794 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 USP25Q9UHP3 1055 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 MAP3K19Q56UN5 1328 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 TNNT3P45378 269 aaPredicted RBP17■□□□□ 0.31
SCARB2-216ENST00000639300 ATP8B2P98198 1209 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 ZSCAN25Q6NSZ9 544 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
SCARB2-216ENST00000639300 NPATQ14207 1427 aa17■□□□□ 0.31
SCARB2-216ENST00000639300 KDM6BO15054 1643 aa16.99■□□□□ 0.31
SCARB2-216ENST00000639300 OTUD7AQ8TE49 926 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-216ENST00000639300 GOLIM4O00461 696 aa16.99■□□□□ 0.31
SCARB2-216ENST00000639300 PIBF1Q8WXW3 757 aa16.99■□□□□ 0.31
SCARB2-216ENST00000639300 PA2G4Q9UQ80 394 aaKnown RBP16.99■□□□□ 0.31
SCARB2-216ENST00000639300 STX6O43752 255 aa16.99■□□□□ 0.31
SCARB2-216ENST00000639300 XRCC6P12956 609 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCARB2-216ENST00000639300 NECAB1Q8N987 351 aa16.99■□□□□ 0.31
SCARB2-216ENST00000639300 ESYT1Q9BSJ8 1104 aa16.99■□□□□ 0.31
SCARB2-216ENST00000639300 RAI14Q9P0K7 980 aa16.99■□□□□ 0.31
SCARB2-216ENST00000639300 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
SCARB2-216ENST00000639300 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
SCARB2-216ENST00000639300 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
SCARB2-216ENST00000639300 COPS6Q7L5N1 327 aa16.98■□□□□ 0.31
SCARB2-216ENST00000639300 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
SCARB2-216ENST00000639300 GJB2P29033 226 aa16.98■□□□□ 0.31
SCARB2-216ENST00000639300 KLHL40Q2TBA0 621 aa16.98■□□□□ 0.31
SCARB2-216ENST00000639300 CEP89Q96ST8 783 aa16.98■□□□□ 0.31
SCARB2-216ENST00000639300 YTHDC2Q9H6S0 1430 aaKnown RBP16.98■□□□□ 0.31
SCARB2-216ENST00000639300 IFIT5Q13325 482 aaKnown RBP16.98■□□□□ 0.31
SCARB2-216ENST00000639300 SCAND2PQ9GZW5 306 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-216ENST00000639300 CCDC183Q5T5S1 534 aa16.97■□□□□ 0.31
SCARB2-216ENST00000639300 CEP57L1Q8IYX8 460 aa16.97■□□□□ 0.31
SCARB2-216ENST00000639300 XAGE3Q8WTP9 111 aa16.97■□□□□ 0.31
SCARB2-216ENST00000639300 DDX46Q7L014 1031 aaKnown RBP16.97■□□□□ 0.31
SCARB2-216ENST00000639300 FAM177A1Q8N128 213 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-216ENST00000639300 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
SCARB2-216ENST00000639300 PHAXQ9H814 394 aaKnown RBP16.96■□□□□ 0.31
SCARB2-216ENST00000639300 UQCRHLA0A096LP55 91 aa16.96■□□□□ 0.31
SCARB2-216ENST00000639300 UQCRHP07919 91 aa16.96■□□□□ 0.31
SCARB2-216ENST00000639300 IL13P35225 146 aa16.96■□□□□ 0.31
SCARB2-216ENST00000639300 HAND2P61296 217 aa16.96■□□□□ 0.31
SCARB2-216ENST00000639300 ZGPATQ8N5A5 531 aaKnown RBP16.96■□□□□ 0.31
SCARB2-216ENST00000639300 SNX21Q969T3 373 aa16.96■□□□□ 0.3
SCARB2-216ENST00000639300 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.3
SCARB2-216ENST00000639300 PTPRTO14522 1441 aa16.95■□□□□ 0.3
SCARB2-216ENST00000639300 ABCC2Q92887 1545 aa16.95■□□□□ 0.3
SCARB2-216ENST00000639300 GPS2Q13227 327 aa16.95■□□□□ 0.3
SCARB2-216ENST00000639300 TRMT112Q9UI30 125 aaKnown RBP16.95■□□□□ 0.3
SCARB2-216ENST00000639300 NAP1L1P55209 391 aaKnown RBP16.95■□□□□ 0.3
SCARB2-216ENST00000639300 CWF19L2Q2TBE0 894 aaKnown RBP16.95■□□□□ 0.3
SCARB2-216ENST00000639300 MINDY4BA8MYZ0 360 aa16.95■□□□□ 0.3
SCARB2-216ENST00000639300 SLC3A2P08195 630 aaKnown RBP16.95■□□□□ 0.3
SCARB2-216ENST00000639300 KCNA6P17658 529 aa16.95■□□□□ 0.3
SCARB2-216ENST00000639300 RAB11FIP4Q86YS3 637 aa16.94■□□□□ 0.3
SCARB2-216ENST00000639300 LRRC2Q9BYS8 371 aa16.94■□□□□ 0.3
SCARB2-216ENST00000639300 IKQ13123 557 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-216ENST00000639300 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
SCARB2-216ENST00000639300 ATP2B2Q01814 1243 aa16.94■□□□□ 0.3
SCARB2-216ENST00000639300 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
SCARB2-216ENST00000639300 FLT4P35916 1363 aa16.94■□□□□ 0.3
SCARB2-216ENST00000639300 CDKL5O76039 1030 aa16.94■□□□□ 0.3
SCARB2-216ENST00000639300 PDIA4P13667 645 aaKnown RBP16.94■□□□□ 0.3
SCARB2-216ENST00000639300 CCDC70Q6NSX1 233 aa16.94■□□□□ 0.3
SCARB2-216ENST00000639300 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
SCARB2-216ENST00000639300 GRM8O00222 908 aa16.93■□□□□ 0.3
SCARB2-216ENST00000639300 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
SCARB2-216ENST00000639300 ABCC1P33527 1531 aa16.93■□□□□ 0.3
SCARB2-216ENST00000639300 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
SCARB2-216ENST00000639300 LDHAL6AQ6ZMR3 332 aa16.93■□□□□ 0.3
SCARB2-216ENST00000639300 C8orf76Q96K31 380 aa16.93■□□□□ 0.3
SCARB2-216ENST00000639300 ARGLU1Q9NWB6 273 aaPredicted RBP16.93■□□□□ 0.3
SCARB2-216ENST00000639300 ZMYM4Q5VZL5 1548 aa16.93■□□□□ 0.3
SCARB2-216ENST00000639300 CCDC112Q8NEF3 446 aa16.93■□□□□ 0.3
SCARB2-216ENST00000639300 FILIP1LQ4L180 1135 aa16.92■□□□□ 0.3
SCARB2-216ENST00000639300 HCLS1P14317 486 aaPredicted RBP16.92■□□□□ 0.3
SCARB2-216ENST00000639300 ZSCAN23Q3MJ62 389 aa16.92■□□□□ 0.3
SCARB2-216ENST00000639300 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms