RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 EVX2Q03828 476 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 PDZRN3Q9UPQ7 1066 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 PLCB2Q00722 1185 aa5.48□□□□□ -1.53
CCDC7-213ENST00000639290 FER1L6Q2WGJ9 1857 aa5.48□□□□□ -1.53
CCDC7-213ENST00000639290 TTC21AQ8NDW8 1320 aa5.48□□□□□ -1.53
CCDC7-213ENST00000639290 TMEM265A0A087WTH1 108 aa5.48□□□□□ -1.53
CCDC7-213ENST00000639290 PRKCSHP14314 528 aaPredicted RBP5.48□□□□□ -1.53
CCDC7-213ENST00000639290 IL2RBP14784 551 aa5.48□□□□□ -1.53
CCDC7-213ENST00000639290 RASSF7Q02833 373 aa5.48□□□□□ -1.53
CCDC7-213ENST00000639290 NBPF1Q3BBV0 1214 aa5.48□□□□□ -1.53
CCDC7-213ENST00000639290 SAPCD2Q86UD0 394 aa5.48□□□□□ -1.53
CCDC7-213ENST00000639290 PARP3Q9Y6F1 533 aa5.48□□□□□ -1.53
CCDC7-213ENST00000639290 SCN11AQ9UI33 1791 aa5.47□□□□□ -1.53
CCDC7-213ENST00000639290 PIK3C2GO75747 1445 aa5.47□□□□□ -1.53
CCDC7-213ENST00000639290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.47□□□□□ -1.53
CCDC7-213ENST00000639290 CCDC24Q8N4L8 307 aa5.47□□□□□ -1.53
CCDC7-213ENST00000639290 DEFB123Q8N688 67 aa5.47□□□□□ -1.53
CCDC7-213ENST00000639290 SMARCC1Q92922 1105 aaPredicted RBP5.47□□□□□ -1.53
CCDC7-213ENST00000639290 CCDC102AQ96A19 550 aa5.47□□□□□ -1.53
CCDC7-213ENST00000639290 RNF186Q9NXI6 227 aa5.47□□□□□ -1.53
CCDC7-213ENST00000639290 ERBB3P21860 1342 aa5.47□□□□□ -1.53
CCDC7-213ENST00000639290 C19orf67A6NJJ6 358 aa5.46□□□□□ -1.53
CCDC7-213ENST00000639290 SPDYE4A6NLX3 237 aa5.46□□□□□ -1.53
CCDC7-213ENST00000639290 BMP8BP34820 402 aa5.46□□□□□ -1.53
CCDC7-213ENST00000639290 EPHX2P34913 555 aa5.46□□□□□ -1.53
CCDC7-213ENST00000639290 ARMC5Q96C12 935 aa5.46□□□□□ -1.53
CCDC7-213ENST00000639290 CFHR5Q9BXR6 569 aa5.46□□□□□ -1.53
CCDC7-213ENST00000639290 BCORQ6W2J9 1755 aa5.46□□□□□ -1.54
CCDC7-213ENST00000639290 LRIT3Q3SXY7 679 aa5.46□□□□□ -1.54
CCDC7-213ENST00000639290 ERFEQ4G0M1 354 aa5.46□□□□□ -1.54
CCDC7-213ENST00000639290 KCNH6Q9H252 994 aa5.46□□□□□ -1.54
CCDC7-213ENST00000639290 HDAC9Q9UKV0 1011 aa5.46□□□□□ -1.54
CCDC7-213ENST00000639290 TMF1P82094 1093 aa5.45□□□□□ -1.54
CCDC7-213ENST00000639290 TJAP1Q5JTD0 557 aa5.45□□□□□ -1.54
CCDC7-213ENST00000639290 SOGA3Q5TF21 947 aa5.45□□□□□ -1.54
CCDC7-213ENST00000639290 TAOK2Q9UL54 1235 aa5.45□□□□□ -1.54
CCDC7-213ENST00000639290 NFKBIEO00221 500 aa5.45□□□□□ -1.54
CCDC7-213ENST00000639290 RAPGEFL1Q9UHV5 662 aa5.45□□□□□ -1.54
CCDC7-213ENST00000639290 NR2E3Q9Y5X4 410 aa5.45□□□□□ -1.54
CCDC7-213ENST00000639290 NRXN2Q9P2S2 1712 aa5.45□□□□□ -1.54
CCDC7-213ENST00000639290 ARFGEF2Q9Y6D5 1785 aa5.44□□□□□ -1.54
CCDC7-213ENST00000639290 GABBR2O75899 941 aa5.44□□□□□ -1.54
CCDC7-213ENST00000639290 CST9Q5W186 159 aa5.44□□□□□ -1.54
CCDC7-213ENST00000639290 GOLGB1Q14789 3259 aaKnown RBP5.44□□□□□ -1.54
CCDC7-213ENST00000639290 DAXXQ9UER7 740 aaPredicted RBP5.44□□□□□ -1.54
CCDC7-213ENST00000639290 PLEKHG3A1L390 1219 aa5.43□□□□□ -1.54
CCDC7-213ENST00000639290 POTEFA5A3E0 1075 aa5.43□□□□□ -1.54
CCDC7-213ENST00000639290 SOX1O00570 391 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-213ENST00000639290 DDNO94850 711 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-213ENST00000639290 USP50Q70EL3 339 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-213ENST00000639290 ALYREFQ86V81 257 aaKnown RBP5.43□□□□□ -1.54
CCDC7-213ENST00000639290 ABTB2Q8N961 1025 aa5.43□□□□□ -1.54
CCDC7-213ENST00000639290 KCNH5Q8NCM2 988 aa5.43□□□□□ -1.54
CCDC7-213ENST00000639290 PALLDQ8WX93 1383 aa5.43□□□□□ -1.54
CCDC7-213ENST00000639290 RGPD5Q99666 1765 aa5.43□□□□□ -1.54
CCDC7-213ENST00000639290 MAP2P11137 1827 aaKnown RBP5.43□□□□□ -1.54
CCDC7-213ENST00000639290 EAPPQ56P03 285 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-213ENST00000639290 HTATIP2Q9BUP3 242 aa5.43□□□□□ -1.54
CCDC7-213ENST00000639290 ADGRB1O14514 1584 aa5.42□□□□□ -1.54
CCDC7-213ENST00000639290 CSB-PGBD3P0DP91 1061 aa5.42□□□□□ -1.54
CCDC7-213ENST00000639290 MAP1SQ66K74 1059 aaPredicted RBP5.42□□□□□ -1.54
CCDC7-213ENST00000639290 TTLL6Q8N841 843 aa5.42□□□□□ -1.54
CCDC7-213ENST00000639290 WASLO00401 505 aaPredicted RBP5.42□□□□□ -1.54
CCDC7-213ENST00000639290 PRIM1P49642 420 aaKnown RBP5.42□□□□□ -1.54
CCDC7-213ENST00000639290 ARHGEF25Q86VW2 580 aa5.42□□□□□ -1.54
CCDC7-213ENST00000639290 TMEM106CQ9BVX2 250 aa5.42□□□□□ -1.54
CCDC7-213ENST00000639290 STK26Q9P289 416 aa5.42□□□□□ -1.54
CCDC7-213ENST00000639290 FARP1Q9Y4F1 1045 aaPredicted RBP5.42□□□□□ -1.54
CCDC7-213ENST00000639290 TRIOBPQ9H2D6 2365 aa5.41□□□□□ -1.54
CCDC7-213ENST00000639290 MRE11P49959 708 aa5.41□□□□□ -1.54
CCDC7-213ENST00000639290 ROCK1Q13464 1354 aa5.41□□□□□ -1.54
CCDC7-213ENST00000639290 USP31Q70CQ4 1352 aa5.41□□□□□ -1.54
CCDC7-213ENST00000639290 FAM155AB1AL88 458 aaPredicted RBP5.41□□□□□ -1.54
CCDC7-213ENST00000639290 ZBTB7BO15156 539 aaPredicted RBP5.41□□□□□ -1.54
CCDC7-213ENST00000639290 ERMP1Q7Z2K6 904 aa5.41□□□□□ -1.54
CCDC7-213ENST00000639290 LRCH3Q96II8 777 aa5.41□□□□□ -1.54
CCDC7-213ENST00000639290 PKD1L2Q7Z442 2459 aa5.41□□□□□ -1.54
CCDC7-213ENST00000639290 CLCN6P51797 869 aa5.4□□□□□ -1.54
CCDC7-213ENST00000639290 GRM1Q13255 1194 aa5.4□□□□□ -1.54
CCDC7-213ENST00000639290 TAOK3Q9H2K8 898 aa5.4□□□□□ -1.54
CCDC7-213ENST00000639290 CGNL1Q0VF96 1302 aa5.4□□□□□ -1.55
CCDC7-213ENST00000639290 MAP3K19Q56UN5 1328 aa5.4□□□□□ -1.55
CCDC7-213ENST00000639290 KCNQ4P56696 695 aa5.4□□□□□ -1.55
CCDC7-213ENST00000639290 RGMBQ6NW40 437 aa5.4□□□□□ -1.55
CCDC7-213ENST00000639290 SAMD7Q7Z3H4 446 aa5.4□□□□□ -1.55
CCDC7-213ENST00000639290 GPC2Q8N158 579 aa5.4□□□□□ -1.55
CCDC7-213ENST00000639290 PGAP2Q9UHJ9 254 aa5.4□□□□□ -1.55
CCDC7-213ENST00000639290 KDM3BQ7LBC6 1761 aa5.4□□□□□ -1.55
CCDC7-213ENST00000639290 NFAT5O94916 1531 aa5.4□□□□□ -1.55
CCDC7-213ENST00000639290 ZNF646O15015 1829 aaPredicted RBP5.39□□□□□ -1.55
CCDC7-213ENST00000639290 TRPA1O75762 1119 aa5.39□□□□□ -1.55
CCDC7-213ENST00000639290 RC3H1Q5TC82 1133 aaKnown RBP5.39□□□□□ -1.55
CCDC7-213ENST00000639290 NUP155O75694 1391 aa5.39□□□□□ -1.55
CCDC7-213ENST00000639290 ST18O60284 1047 aa5.39□□□□□ -1.55
CCDC7-213ENST00000639290 FKTNO75072 461 aa5.39□□□□□ -1.55
CCDC7-213ENST00000639290 CD44P16070 742 aaKnown RBP5.39□□□□□ -1.55
CCDC7-213ENST00000639290 KIF23Q02241 960 aaPredicted RBP5.39□□□□□ -1.55
CCDC7-213ENST00000639290 ZNF296Q8WUU4 475 aaPredicted RBP5.39□□□□□ -1.55
CCDC7-213ENST00000639290 AXIN2Q9Y2T1 843 aa5.39□□□□□ -1.55
CCDC7-213ENST00000639290 COL2A1P02458 1487 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms