RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 PDE1AP54750 535 aa13.13□□□□□ -0.31
SPIN3-216ENST00000638940 KIF2CQ99661 725 aa13.13□□□□□ -0.31
SPIN3-216ENST00000638940 PNMA6EA0A0J9YXQ4 647 aa13.12□□□□□ -0.31
SPIN3-216ENST00000638940 SDSP20132 328 aa13.12□□□□□ -0.31
SPIN3-216ENST00000638940 IFNL2Q8IZJ0 200 aa13.12□□□□□ -0.31
SPIN3-216ENST00000638940 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
SPIN3-216ENST00000638940 HSP90AB1P08238 724 aaKnown RBP13.12□□□□□ -0.31
SPIN3-216ENST00000638940 OTUD7AQ8TE49 926 aaPredicted RBP13.12□□□□□ -0.31
SPIN3-216ENST00000638940 NLRP2Q9NX02 1062 aa13.12□□□□□ -0.31
SPIN3-216ENST00000638940 KSR2Q6VAB6 950 aa13.11□□□□□ -0.31
SPIN3-216ENST00000638940 C5P01031 1676 aa13.11□□□□□ -0.31
SPIN3-216ENST00000638940 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
SPIN3-216ENST00000638940 PI4KAP2A4QPH2 592 aa13.11□□□□□ -0.31
SPIN3-216ENST00000638940 MTX1Q13505 466 aa13.11□□□□□ -0.31
SPIN3-216ENST00000638940 BRINP3Q76B58 766 aa13.11□□□□□ -0.31
SPIN3-216ENST00000638940 PI4KAP1Q8N8J0 262 aa13.11□□□□□ -0.31
SPIN3-216ENST00000638940 DDX21Q9NR30 783 aaKnown RBP eCLIP13.11□□□□□ -0.31
SPIN3-216ENST00000638940 ABCA3Q99758 1704 aa13.11□□□□□ -0.31
SPIN3-216ENST00000638940 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
SPIN3-216ENST00000638940 HSPA2P54652 639 aa13.1□□□□□ -0.31
SPIN3-216ENST00000638940 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
SPIN3-216ENST00000638940 DDX17Q92841 729 aaKnown RBP13.1□□□□□ -0.31
SPIN3-216ENST00000638940 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
SPIN3-216ENST00000638940 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
SPIN3-216ENST00000638940 ZNF790Q6PG37 636 aa13.09□□□□□ -0.31
SPIN3-216ENST00000638940 EXOC6BQ9Y2D4 811 aa13.09□□□□□ -0.31
SPIN3-216ENST00000638940 UTYO14607 1347 aa13.09□□□□□ -0.31
SPIN3-216ENST00000638940 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
SPIN3-216ENST00000638940 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
SPIN3-216ENST00000638940 REC8O95072 547 aa13.09□□□□□ -0.31
SPIN3-216ENST00000638940 MX1P20591 662 aa13.09□□□□□ -0.31
SPIN3-216ENST00000638940 DDIT3P35638 169 aa13.09□□□□□ -0.31
SPIN3-216ENST00000638940 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
SPIN3-216ENST00000638940 NHSL1Q5SYE7 1610 aa13.08□□□□□ -0.32
SPIN3-216ENST00000638940 EPB41L2O43491 1005 aaKnown RBP13.08□□□□□ -0.32
SPIN3-216ENST00000638940 RABEP1Q15276 862 aa13.08□□□□□ -0.32
SPIN3-216ENST00000638940 PPP1R42Q7Z4L9 355 aa13.08□□□□□ -0.32
SPIN3-216ENST00000638940 SLKQ9H2G2 1235 aaPredicted RBP13.08□□□□□ -0.32
SPIN3-216ENST00000638940 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
SPIN3-216ENST00000638940 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.32
SPIN3-216ENST00000638940 PDIA6Q15084 440 aa13.07□□□□□ -0.32
SPIN3-216ENST00000638940 LINS1Q8NG48 757 aa13.07□□□□□ -0.32
SPIN3-216ENST00000638940 APBB1O00213 710 aa13.07□□□□□ -0.32
SPIN3-216ENST00000638940 ERC2O15083 957 aa13.07□□□□□ -0.32
SPIN3-216ENST00000638940 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
SPIN3-216ENST00000638940 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
SPIN3-216ENST00000638940 WDR17Q8IZU2 1322 aa13.06□□□□□ -0.32
SPIN3-216ENST00000638940 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
SPIN3-216ENST00000638940 CABLES1Q8TDN4 633 aa13.06□□□□□ -0.32
SPIN3-216ENST00000638940 SLAIN2Q9P270 581 aa13.06□□□□□ -0.32
SPIN3-216ENST00000638940 USP42Q9H9J4 1324 aaKnown RBP13.06□□□□□ -0.32
SPIN3-216ENST00000638940 GLI3P10071 1580 aa13.06□□□□□ -0.32
SPIN3-216ENST00000638940 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
SPIN3-216ENST00000638940 CYP27B1O15528 508 aa13.05□□□□□ -0.32
SPIN3-216ENST00000638940 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
SPIN3-216ENST00000638940 PAPPAQ13219 1627 aa13.05□□□□□ -0.32
SPIN3-216ENST00000638940 UBR2Q8IWV8 1755 aa13.05□□□□□ -0.32
SPIN3-216ENST00000638940 SRGAP3O43295 1099 aa13.05□□□□□ -0.32
SPIN3-216ENST00000638940 RHPN1Q8TCX5 695 aa13.05□□□□□ -0.32
SPIN3-216ENST00000638940 COL5A2P05997 1499 aaPredicted RBP13.05□□□□□ -0.32
SPIN3-216ENST00000638940 SNRPA1P09661 255 aaKnown RBP13.04□□□□□ -0.32
SPIN3-216ENST00000638940 CHRNA2Q15822 529 aa13.04□□□□□ -0.32
SPIN3-216ENST00000638940 LARP1Q6PKG0 1096 aaKnown RBP13.04□□□□□ -0.32
SPIN3-216ENST00000638940 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
SPIN3-216ENST00000638940 IL17RAQ96F46 866 aa13.04□□□□□ -0.32
SPIN3-216ENST00000638940 AK9Q5TCS8 1911 aa13.04□□□□□ -0.32
SPIN3-216ENST00000638940 SURF6O75683 361 aaKnown RBP13.04□□□□□ -0.32
SPIN3-216ENST00000638940 ANXA1P04083 346 aa13.04□□□□□ -0.32
SPIN3-216ENST00000638940 GSE1Q14687 1217 aa13.04□□□□□ -0.32
SPIN3-216ENST00000638940 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
SPIN3-216ENST00000638940 COL15A1P39059 1388 aa13.04□□□□□ -0.32
SPIN3-216ENST00000638940 ERC1Q8IUD2 1116 aa13.03□□□□□ -0.32
SPIN3-216ENST00000638940 FMNL2Q96PY5 1086 aa13.03□□□□□ -0.32
SPIN3-216ENST00000638940 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
SPIN3-216ENST00000638940 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
SPIN3-216ENST00000638940 C9orf78Q9NZ63 289 aaPredicted RBP13.03□□□□□ -0.32
SPIN3-216ENST00000638940 PCDH11XQ9BZA7 1347 aa13.03□□□□□ -0.32
SPIN3-216ENST00000638940 PCDH11YQ9BZA8 1340 aa13.03□□□□□ -0.32
SPIN3-216ENST00000638940 SHANK3Q9BYB0 1731 aa13.03□□□□□ -0.32
SPIN3-216ENST00000638940 TTC5Q8N0Z6 440 aa13.03□□□□□ -0.32
SPIN3-216ENST00000638940 TTC41PQ6P2S7 1318 aa13.02□□□□□ -0.32
SPIN3-216ENST00000638940 ERVV-2B6SEH9 535 aa13.02□□□□□ -0.32
SPIN3-216ENST00000638940 GRM8O00222 908 aa13.02□□□□□ -0.32
SPIN3-216ENST00000638940 LRP10Q7Z4F1 713 aa13.02□□□□□ -0.32
SPIN3-216ENST00000638940 ESYT1Q9BSJ8 1104 aa13.02□□□□□ -0.32
SPIN3-216ENST00000638940 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.32
SPIN3-216ENST00000638940 CHMLP26374 656 aa13.02□□□□□ -0.33
SPIN3-216ENST00000638940 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
SPIN3-216ENST00000638940 PRDM11Q9NQV5 511 aa13.02□□□□□ -0.33
SPIN3-216ENST00000638940 SLC39A6Q13433 755 aa13.01□□□□□ -0.33
SPIN3-216ENST00000638940 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
SPIN3-216ENST00000638940 ZNF335Q9H4Z2 1342 aaPredicted RBP13.01□□□□□ -0.33
SPIN3-216ENST00000638940 ARFGEF2Q9Y6D5 1785 aa13.01□□□□□ -0.33
SPIN3-216ENST00000638940 CABP4P57796 275 aa13.01□□□□□ -0.33
SPIN3-216ENST00000638940 ANAPC15P60006 121 aa13.01□□□□□ -0.33
SPIN3-216ENST00000638940 NEXNQ0ZGT2 675 aa13□□□□□ -0.33
SPIN3-216ENST00000638940 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
SPIN3-216ENST00000638940 PI4K2BQ8TCG2 481 aa13□□□□□ -0.33
SPIN3-216ENST00000638940 MCM4P33991 863 aa13□□□□□ -0.33
SPIN3-216ENST00000638940 RIC3Q7Z5B4 369 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms