RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 CPA1P15085 419 aa12.48□□□□□ -0.41
PAX6-244ENST00000638913 RHPN1Q8TCX5 695 aa12.48□□□□□ -0.41
PAX6-244ENST00000638913 CWC27Q6UX04 472 aaKnown RBP12.48□□□□□ -0.41
PAX6-244ENST00000638913 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
PAX6-244ENST00000638913 PPP1R9BQ96SB3 815 aa12.48□□□□□ -0.41
PAX6-244ENST00000638913 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
PAX6-244ENST00000638913 SPG7Q9UQ90 795 aa12.48□□□□□ -0.41
PAX6-244ENST00000638913 DIP2AQ14689 1571 aa12.47□□□□□ -0.41
PAX6-244ENST00000638913 OS9Q13438 667 aaPredicted RBP12.47□□□□□ -0.41
PAX6-244ENST00000638913 THEMISQ8N1K5 641 aaPredicted RBP12.47□□□□□ -0.41
PAX6-244ENST00000638913 SSH3Q8TE77 659 aa12.47□□□□□ -0.41
PAX6-244ENST00000638913 ADAMTSL3P82987 1691 aa12.47□□□□□ -0.41
PAX6-244ENST00000638913 GADD45BO75293 160 aaPredicted RBP12.47□□□□□ -0.41
PAX6-244ENST00000638913 BRD1O95696 1058 aa12.47□□□□□ -0.41
PAX6-244ENST00000638913 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
PAX6-244ENST00000638913 PIK3C2AO00443 1686 aa12.46□□□□□ -0.41
PAX6-244ENST00000638913 PRAMEF22A3QJZ6 481 aa12.46□□□□□ -0.41
PAX6-244ENST00000638913 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
PAX6-244ENST00000638913 PI4K2BQ8TCG2 481 aa12.46□□□□□ -0.41
PAX6-244ENST00000638913 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.41
PAX6-244ENST00000638913 XRN1Q8IZH2 1706 aaKnown RBP12.46□□□□□ -0.41
PAX6-244ENST00000638913 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
PAX6-244ENST00000638913 MPNDQ8N594 471 aa12.45□□□□□ -0.42
PAX6-244ENST00000638913 PA2G4Q9UQ80 394 aaKnown RBP12.45□□□□□ -0.42
PAX6-244ENST00000638913 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
PAX6-244ENST00000638913 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
PAX6-244ENST00000638913 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
PAX6-244ENST00000638913 CUL4AQ13619 759 aa12.45□□□□□ -0.42
PAX6-244ENST00000638913 ESCO1Q5FWF5 840 aa12.45□□□□□ -0.42
PAX6-244ENST00000638913 DNAAF4Q8WXU2 420 aa12.45□□□□□ -0.42
PAX6-244ENST00000638913 PHF8Q9UPP1 1060 aa12.45□□□□□ -0.42
PAX6-244ENST00000638913 MSNP26038 577 aaKnown RBP12.44□□□□□ -0.42
PAX6-244ENST00000638913 MCM2P49736 904 aa12.44□□□□□ -0.42
PAX6-244ENST00000638913 TEFQ10587 303 aa12.44□□□□□ -0.42
PAX6-244ENST00000638913 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
PAX6-244ENST00000638913 BEND3Q5T5X7 828 aa12.44□□□□□ -0.42
PAX6-244ENST00000638913 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
PAX6-244ENST00000638913 HSPA4P34932 840 aa12.44□□□□□ -0.42
PAX6-244ENST00000638913 PSME1Q06323 249 aa12.44□□□□□ -0.42
PAX6-244ENST00000638913 POLA2Q14181 598 aa12.44□□□□□ -0.42
PAX6-244ENST00000638913 LRSAM1Q6UWE0 723 aa12.44□□□□□ -0.42
PAX6-244ENST00000638913 ZSCAN30Q86W11 494 aa12.44□□□□□ -0.42
PAX6-244ENST00000638913 NWD1Q149M9 1564 aa12.43□□□□□ -0.42
PAX6-244ENST00000638913 ANAPC15P60006 121 aa12.43□□□□□ -0.42
PAX6-244ENST00000638913 CWF19L2Q2TBE0 894 aaKnown RBP12.43□□□□□ -0.42
PAX6-244ENST00000638913 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
PAX6-244ENST00000638913 KIF1BPQ96EK5 621 aa12.43□□□□□ -0.42
PAX6-244ENST00000638913 SNX14Q9Y5W7 946 aa12.43□□□□□ -0.42
PAX6-244ENST00000638913 RAB11FIP3O75154 756 aa12.43□□□□□ -0.42
PAX6-244ENST00000638913 AIMP1Q12904 312 aaKnown RBP12.43□□□□□ -0.42
PAX6-244ENST00000638913 IP6K1Q92551 441 aa12.43□□□□□ -0.42
PAX6-244ENST00000638913 SGSM2O43147 1006 aa12.42□□□□□ -0.42
PAX6-244ENST00000638913 AK2P54819 239 aa12.42□□□□□ -0.42
PAX6-244ENST00000638913 MAP3K2Q9Y2U5 619 aa12.42□□□□□ -0.42
PAX6-244ENST00000638913 KIAA1211Q6ZU35 1233 aa12.42□□□□□ -0.42
PAX6-244ENST00000638913 CNTROBQ8N137 903 aa12.42□□□□□ -0.42
PAX6-244ENST00000638913 LSG1Q9H089 658 aaKnown RBP12.42□□□□□ -0.42
PAX6-244ENST00000638913 C9orf78Q9NZ63 289 aaPredicted RBP12.42□□□□□ -0.42
PAX6-244ENST00000638913 PTH1RQ03431 593 aa12.41□□□□□ -0.42
PAX6-244ENST00000638913 CNPY2Q9Y2B0 182 aa12.41□□□□□ -0.42
PAX6-244ENST00000638913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.41□□□□□ -0.42
PAX6-244ENST00000638913 ZNF142P52746 1687 aaPredicted RBP12.41□□□□□ -0.42
PAX6-244ENST00000638913 LARGE1O95461 756 aa12.41□□□□□ -0.42
PAX6-244ENST00000638913 CASTP20810 708 aaKnown RBP12.41□□□□□ -0.42
PAX6-244ENST00000638913 RUFY3Q7L099 469 aa12.41□□□□□ -0.42
PAX6-244ENST00000638913 INTS4Q96HW7 963 aaKnown RBP12.41□□□□□ -0.42
PAX6-244ENST00000638913 FAM208AQ9UK61 1670 aaKnown RBP12.41□□□□□ -0.42
PAX6-244ENST00000638913 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
PAX6-244ENST00000638913 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
PAX6-244ENST00000638913 ADCY9O60503 1353 aa12.4□□□□□ -0.42
PAX6-244ENST00000638913 RAD50Q92878 1312 aa12.4□□□□□ -0.42
PAX6-244ENST00000638913 MBD3O95983 291 aa12.4□□□□□ -0.43
PAX6-244ENST00000638913 ADCK5Q3MIX3 580 aa12.4□□□□□ -0.43
PAX6-244ENST00000638913 AEBP2Q6ZN18 517 aaPredicted RBP12.4□□□□□ -0.43
PAX6-244ENST00000638913 SIL1Q9H173 461 aa12.4□□□□□ -0.43
PAX6-244ENST00000638913 DIAPH3Q9NSV4 1193 aa12.4□□□□□ -0.43
PAX6-244ENST00000638913 CCDC83Q8IWF9 413 aa12.39□□□□□ -0.43
PAX6-244ENST00000638913 JARID2Q92833 1246 aaPredicted RBP12.39□□□□□ -0.43
PAX6-244ENST00000638913 BABAM1Q9NWV8 329 aa12.39□□□□□ -0.43
PAX6-244ENST00000638913 CEMIPQ8WUJ3 1361 aa12.39□□□□□ -0.43
PAX6-244ENST00000638913 AOX1Q06278 1338 aa12.39□□□□□ -0.43
PAX6-244ENST00000638913 RPAP1Q9BWH6 1393 aaPredicted RBP12.39□□□□□ -0.43
PAX6-244ENST00000638913 COL9A3Q14050 684 aaPredicted RBP12.38□□□□□ -0.43
PAX6-244ENST00000638913 CLASRPQ8N2M8 674 aaKnown RBP12.38□□□□□ -0.43
PAX6-244ENST00000638913 KLHDC4Q8TBB5 520 aa12.38□□□□□ -0.43
PAX6-244ENST00000638913 JAKMIP1Q96N16 626 aaKnown RBP12.38□□□□□ -0.43
PAX6-244ENST00000638913 ORAI2Q96SN7 254 aa12.38□□□□□ -0.43
PAX6-244ENST00000638913 CCDC8Q9H0W5 538 aaPredicted RBP12.38□□□□□ -0.43
PAX6-244ENST00000638913 TSPY26PQ9H489 355 aa12.38□□□□□ -0.43
PAX6-244ENST00000638913 WDR33Q9C0J8 1336 aaKnown RBP12.38□□□□□ -0.43
PAX6-244ENST00000638913 FIBPO43427 364 aa12.38□□□□□ -0.43
PAX6-244ENST00000638913 IFIT2P09913 472 aaKnown RBP12.38□□□□□ -0.43
PAX6-244ENST00000638913 C1orf141Q5JVX7 400 aa12.38□□□□□ -0.43
PAX6-244ENST00000638913 AACSQ86V21 672 aa12.38□□□□□ -0.43
PAX6-244ENST00000638913 PDLIM2Q96JY6 352 aa12.38□□□□□ -0.43
PAX6-244ENST00000638913 TTC14Q96N46 770 aa12.38□□□□□ -0.43
PAX6-244ENST00000638913 R3HCC1Q9Y3T6 440 aaKnown RBP12.38□□□□□ -0.43
PAX6-244ENST00000638913 LRRC37A3O60309 1634 aa12.38□□□□□ -0.43
PAX6-244ENST00000638913 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
PAX6-244ENST00000638913 SYT1P21579 422 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms