RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 FCHSD2O94868 740 aa22.69■■□□□ 1.22
SMN2-216ENST00000638794 TM4SF1P30408 202 aa22.69■■□□□ 1.22
SMN2-216ENST00000638794 GAS2L2Q8NHY3 880 aa22.69■■□□□ 1.22
SMN2-216ENST00000638794 GNAT3A8MTJ3 354 aa22.68■■□□□ 1.22
SMN2-216ENST00000638794 ARHGAP27Q6ZUM4 889 aa22.67■■□□□ 1.22
SMN2-216ENST00000638794 TTC5Q8N0Z6 440 aa22.67■■□□□ 1.22
SMN2-216ENST00000638794 IL17REQ8NFR9 667 aa22.67■■□□□ 1.22
SMN2-216ENST00000638794 NARFQ9UHQ1 456 aa22.67■■□□□ 1.22
SMN2-216ENST00000638794 TEFQ10587 303 aa22.66■■□□□ 1.22
SMN2-216ENST00000638794 PIM2Q9P1W9 311 aa22.66■■□□□ 1.22
SMN2-216ENST00000638794 NRXN2Q9P2S2 1712 aa22.65■■□□□ 1.22
SMN2-216ENST00000638794 CANXP27824 592 aaKnown RBP22.64■■□□□ 1.21
SMN2-216ENST00000638794 CHRNA5P30532 468 aa22.64■■□□□ 1.21
SMN2-216ENST00000638794 NFIXQ14938 502 aa22.64■■□□□ 1.21
SMN2-216ENST00000638794 ZNF790Q6PG37 636 aa22.64■■□□□ 1.21
SMN2-216ENST00000638794 ZNF496Q96IT1 587 aaPredicted RBP22.64■■□□□ 1.21
SMN2-216ENST00000638794 PHACTR3Q96KR7 559 aa22.64■■□□□ 1.21
SMN2-216ENST00000638794 CFAP53Q96M91 514 aa22.64■■□□□ 1.21
SMN2-216ENST00000638794 STARD3NLO95772 234 aa22.63■■□□□ 1.21
SMN2-216ENST00000638794 PRKAR2BP31323 418 aa22.63■■□□□ 1.21
SMN2-216ENST00000638794 DALRD3Q5D0E6 543 aaKnown RBP22.63■■□□□ 1.21
SMN2-216ENST00000638794 RSPH6AQ9H0K4 717 aa22.63■■□□□ 1.21
SMN2-216ENST00000638794 BCL2L12Q9HB09 334 aa22.63■■□□□ 1.21
SMN2-216ENST00000638794 CEMIPQ8WUJ3 1361 aa22.63■■□□□ 1.21
SMN2-216ENST00000638794 HEG1Q9ULI3 1381 aa22.63■■□□□ 1.21
SMN2-216ENST00000638794 KIF3CO14782 793 aa22.62■■□□□ 1.21
SMN2-216ENST00000638794 PPP2R1AP30153 589 aa22.6■■□□□ 1.21
SMN2-216ENST00000638794 EIF5P55010 431 aaKnown RBP22.6■■□□□ 1.21
SMN2-216ENST00000638794 SCN7AQ01118 1682 aa22.6■■□□□ 1.21
SMN2-216ENST00000638794 DLEC1Q9Y238 1755 aa22.6■■□□□ 1.21
SMN2-216ENST00000638794 NUDCQ9Y266 331 aa22.59■■□□□ 1.21
SMN2-216ENST00000638794 SERPINB2P05120 415 aa22.58■■□□□ 1.21
SMN2-216ENST00000638794 C9orf131Q5VYM1 1079 aa22.58■■□□□ 1.21
SMN2-216ENST00000638794 TEX13AQ9BXU3 409 aaPredicted RBP22.58■■□□□ 1.21
SMN2-216ENST00000638794 SBF1O95248 1867 aa22.58■■□□□ 1.2
SMN2-216ENST00000638794 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
SMN2-216ENST00000638794 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMN2-216ENST00000638794 FMNL2Q96PY5 1086 aa22.57■■□□□ 1.2
SMN2-216ENST00000638794 A0A087WZG4 1122 aa22.56■■□□□ 1.2
SMN2-216ENST00000638794 KCNQ3O43525 872 aa22.56■■□□□ 1.2
SMN2-216ENST00000638794 HSPA6P17066 643 aa22.56■■□□□ 1.2
SMN2-216ENST00000638794 CARMIL3Q8ND23 1372 aa22.55■■□□□ 1.2
SMN2-216ENST00000638794 BTBD11A6QL63 1104 aa22.55■■□□□ 1.2
SMN2-216ENST00000638794 BICDL1Q6ZP65 573 aa22.55■■□□□ 1.2
SMN2-216ENST00000638794 ZNF330Q9Y3S2 320 aaPredicted RBP22.55■■□□□ 1.2
SMN2-216ENST00000638794 IL6STP40189 918 aaPredicted RBP22.54■■□□□ 1.2
SMN2-216ENST00000638794 ANKRD31Q8N7Z5 1873 aa22.54■■□□□ 1.2
SMN2-216ENST00000638794 A1BGP04217 495 aa22.53■■□□□ 1.2
SMN2-216ENST00000638794 NMRK2Q9NPI5 230 aa22.53■■□□□ 1.2
SMN2-216ENST00000638794 TBC1D2BQ9UPU7 963 aa22.53■■□□□ 1.2
SMN2-216ENST00000638794 TBC1D9BQ66K14 1250 aa22.52■■□□□ 1.2
SMN2-216ENST00000638794 MCM10Q7L590 875 aa22.52■■□□□ 1.2
SMN2-216ENST00000638794 RNF181Q9P0P0 153 aa22.52■■□□□ 1.2
SMN2-216ENST00000638794 BCORQ6W2J9 1755 aa22.52■■□□□ 1.2
SMN2-216ENST00000638794 TOMM70O94826 608 aa22.5■■□□□ 1.19
SMN2-216ENST00000638794 C2CD5Q86YS7 1000 aa22.5■■□□□ 1.19
SMN2-216ENST00000638794 RTF1Q92541 710 aaKnown RBP22.5■■□□□ 1.19
SMN2-216ENST00000638794 COL11A2P13942 1736 aaPredicted RBP22.49■■□□□ 1.19
SMN2-216ENST00000638794 PRAMEF22A3QJZ6 481 aa22.48■■□□□ 1.19
SMN2-216ENST00000638794 H0YIN7 160 aa22.48■■□□□ 1.19
SMN2-216ENST00000638794 CAMTA2O94983 1202 aa22.48■■□□□ 1.19
SMN2-216ENST00000638794 RASSF7Q02833 373 aa22.48■■□□□ 1.19
SMN2-216ENST00000638794 DCTN1Q14203 1278 aa22.48■■□□□ 1.19
SMN2-216ENST00000638794 NPM2Q86SE8 214 aaKnown RBP22.48■■□□□ 1.19
SMN2-216ENST00000638794 TTLL6Q8N841 843 aa22.48■■□□□ 1.19
SMN2-216ENST00000638794 USP16Q9Y5T5 823 aa22.48■■□□□ 1.19
SMN2-216ENST00000638794 DLG5Q8TDM6 1919 aa22.47■■□□□ 1.19
SMN2-216ENST00000638794 PRR5LQ6MZQ0 368 aa22.47■■□□□ 1.19
SMN2-216ENST00000638794 CCDC88AQ3V6T2 1871 aa22.47■■□□□ 1.19
SMN2-216ENST00000638794 TNRC6CQ9HCJ0 1690 aaKnown RBP22.46■■□□□ 1.19
SMN2-216ENST00000638794 PIP4K2AP48426 406 aaPredicted RBP22.46■■□□□ 1.19
SMN2-216ENST00000638794 HTATSF1O43719 755 aaKnown RBP22.45■■□□□ 1.18
SMN2-216ENST00000638794 SNRPA1P09661 255 aaKnown RBP22.45■■□□□ 1.18
SMN2-216ENST00000638794 CCDC24Q8N4L8 307 aa22.45■■□□□ 1.18
SMN2-216ENST00000638794 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
SMN2-216ENST00000638794 PRELPP51888 382 aa22.44■■□□□ 1.18
SMN2-216ENST00000638794 DZIP3Q86Y13 1208 aaKnown RBP22.44■■□□□ 1.18
SMN2-216ENST00000638794 TIAM2Q8IVF5 1701 aa22.44■■□□□ 1.18
SMN2-216ENST00000638794 SETDB2Q96T68 719 aa22.44■■□□□ 1.18
SMN2-216ENST00000638794 BRIP1Q9BX63 1249 aa22.44■■□□□ 1.18
SMN2-216ENST00000638794 LMNB1P20700 586 aa22.43■■□□□ 1.18
SMN2-216ENST00000638794 PDE6BP35913 854 aa22.43■■□□□ 1.18
SMN2-216ENST00000638794 ZC3H4Q9UPT8 1303 aaKnown RBP22.42■■□□□ 1.18
SMN2-216ENST00000638794 CNBD1Q8NA66 436 aa22.42■■□□□ 1.18
SMN2-216ENST00000638794 ZNF622Q969S3 477 aaKnown RBP eCLIP22.42■■□□□ 1.18
SMN2-216ENST00000638794 PDZRN3Q9UPQ7 1066 aa22.42■■□□□ 1.18
SMN2-216ENST00000638794 CACNA1SQ13698 1873 aa22.42■■□□□ 1.18
SMN2-216ENST00000638794 LAMB4A4D0S4 1761 aa22.42■■□□□ 1.18
SMN2-216ENST00000638794 RBM46Q8TBY0 533 aaKnown RBP22.41■■□□□ 1.18
SMN2-216ENST00000638794 KDM3BQ7LBC6 1761 aa22.4■■□□□ 1.18
SMN2-216ENST00000638794 NFKBIEO00221 500 aa22.4■■□□□ 1.18
SMN2-216ENST00000638794 APLP1P51693 650 aa22.4■■□□□ 1.18
SMN2-216ENST00000638794 TAF7Q15545 349 aaPredicted RBP22.4■■□□□ 1.18
SMN2-216ENST00000638794 C16orf71Q8IYS4 520 aaPredicted RBP22.4■■□□□ 1.18
SMN2-216ENST00000638794 RRAGCQ9HB90 399 aa22.4■■□□□ 1.18
SMN2-216ENST00000638794 FER1L6Q2WGJ9 1857 aa22.4■■□□□ 1.18
SMN2-216ENST00000638794 NBPF26B4DH59 902 aa22.39■■□□□ 1.17
SMN2-216ENST00000638794 NPHP1O15259 732 aa22.39■■□□□ 1.17
SMN2-216ENST00000638794 ST5P78524 1137 aa22.39■■□□□ 1.17
SMN2-216ENST00000638794 NBPF10Q6P3W6 841 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms