RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 SPATA31A7Q8IWB4 1347 aa27.24■■□□□ 1.95
SCARB2-212ENST00000638663 C8orf37Q96NL8 207 aa27.24■■□□□ 1.95
SCARB2-212ENST00000638663 ADCY9O60503 1353 aa27.23■■□□□ 1.95
SCARB2-212ENST00000638663 CDCA7Q9BWT1 371 aaPredicted RBP27.23■■□□□ 1.95
SCARB2-212ENST00000638663 N4BP2Q86UW6 1770 aaPredicted RBP27.23■■□□□ 1.95
SCARB2-212ENST00000638663 GLI3P10071 1580 aa27.23■■□□□ 1.95
SCARB2-212ENST00000638663 CEP85Q6P2H3 762 aa27.22■■□□□ 1.95
SCARB2-212ENST00000638663 ANKRD44Q8N8A2 993 aa27.22■■□□□ 1.95
SCARB2-212ENST00000638663 TNS2Q63HR2 1409 aa27.22■■□□□ 1.95
SCARB2-212ENST00000638663 MYL6BP14649 208 aa27.22■■□□□ 1.95
SCARB2-212ENST00000638663 RPAP2Q8IXW5 612 aaPredicted RBP27.22■■□□□ 1.95
SCARB2-212ENST00000638663 NGLY1Q96IV0 654 aa27.22■■□□□ 1.95
SCARB2-212ENST00000638663 SRCIN1Q9C0H9 1055 aa27.22■■□□□ 1.95
SCARB2-212ENST00000638663 PAPPAQ13219 1627 aa27.21■■□□□ 1.95
SCARB2-212ENST00000638663 PTCD1O75127 700 aaKnown RBP27.2■■□□□ 1.95
SCARB2-212ENST00000638663 GNAI3P08754 354 aa27.2■■□□□ 1.95
SCARB2-212ENST00000638663 AIMP1Q12904 312 aaKnown RBP27.2■■□□□ 1.95
SCARB2-212ENST00000638663 GCC1Q96CN9 775 aa27.2■■□□□ 1.95
SCARB2-212ENST00000638663 KCPQ6ZWJ8 1503 aa27.2■■□□□ 1.94
SCARB2-212ENST00000638663 UBR2Q8IWV8 1755 aa27.2■■□□□ 1.94
SCARB2-212ENST00000638663 BEND3Q5T5X7 828 aa27.2■■□□□ 1.94
SCARB2-212ENST00000638663 KSR2Q6VAB6 950 aa27.2■■□□□ 1.94
SCARB2-212ENST00000638663 UNC5CLQ8IV45 518 aa27.2■■□□□ 1.94
SCARB2-212ENST00000638663 BACH2Q9BYV9 841 aa27.2■■□□□ 1.94
SCARB2-212ENST00000638663 MAP3K2Q9Y2U5 619 aa27.2■■□□□ 1.94
SCARB2-212ENST00000638663 GNAI2P04899 355 aa27.19■■□□□ 1.94
SCARB2-212ENST00000638663 PIGBQ92521 554 aa27.19■■□□□ 1.94
SCARB2-212ENST00000638663 PIP4K2AP48426 406 aaPredicted RBP27.18■■□□□ 1.94
SCARB2-212ENST00000638663 NUCB1Q02818 461 aa27.18■■□□□ 1.94
SCARB2-212ENST00000638663 DDB1Q16531 1140 aa27.18■■□□□ 1.94
SCARB2-212ENST00000638663 USP44Q9H0E7 712 aa27.18■■□□□ 1.94
SCARB2-212ENST00000638663 SPATA31A6Q5VVP1 1343 aa27.17■■□□□ 1.94
SCARB2-212ENST00000638663 DDX58O95786 925 aaKnown RBP27.17■■□□□ 1.94
SCARB2-212ENST00000638663 LAMB4A4D0S4 1761 aa27.16■■□□□ 1.94
SCARB2-212ENST00000638663 XAGE3Q8WTP9 111 aa27.16■■□□□ 1.94
SCARB2-212ENST00000638663 ASAP1Q9ULH1 1129 aa27.16■■□□□ 1.94
SCARB2-212ENST00000638663 BCL9LQ86UU0 1499 aa27.15■■□□□ 1.94
SCARB2-212ENST00000638663 ANKRD45Q5TZF3 282 aa27.15■■□□□ 1.94
SCARB2-212ENST00000638663 BARGINQ6ZT62 677 aa27.15■■□□□ 1.94
SCARB2-212ENST00000638663 ITGB4P16144 1822 aa27.14■■□□□ 1.94
SCARB2-212ENST00000638663 LRP6O75581 1613 aa27.14■■□□□ 1.94
SCARB2-212ENST00000638663 UBTFL1P0CB47 393 aaPredicted RBP27.14■■□□□ 1.94
SCARB2-212ENST00000638663 HSPA1LP34931 641 aa27.14■■□□□ 1.94
SCARB2-212ENST00000638663 COPS6Q7L5N1 327 aa27.14■■□□□ 1.94
SCARB2-212ENST00000638663 LRP10Q7Z4F1 713 aa27.14■■□□□ 1.94
SCARB2-212ENST00000638663 CHD1LQ86WJ1 897 aa27.14■■□□□ 1.94
SCARB2-212ENST00000638663 LNPKQ9C0E8 428 aa27.14■■□□□ 1.94
SCARB2-212ENST00000638663 DCTPP1Q9H773 170 aa27.14■■□□□ 1.93
SCARB2-212ENST00000638663 FAM161AQ3B820 660 aa27.13■■□□□ 1.93
SCARB2-212ENST00000638663 LRRFIP2Q9Y608 721 aaKnown RBP27.13■■□□□ 1.93
SCARB2-212ENST00000638663 SYTL4Q96C24 671 aaPredicted RBP27.12■■□□□ 1.93
SCARB2-212ENST00000638663 ATG3Q9NT62 314 aa27.12■■□□□ 1.93
SCARB2-212ENST00000638663 RIC3Q7Z5B4 369 aa27.12■■□□□ 1.93
SCARB2-212ENST00000638663 BCL9O00512 1426 aa27.11■■□□□ 1.93
SCARB2-212ENST00000638663 HMMRO75330 724 aa27.11■■□□□ 1.93
SCARB2-212ENST00000638663 VPS72Q15906 364 aa27.11■■□□□ 1.93
SCARB2-212ENST00000638663 FNBP4Q8N3X1 1017 aaPredicted RBP27.11■■□□□ 1.93
SCARB2-212ENST00000638663 KAT6BQ8WYB5 2073 aa27.1■■□□□ 1.93
SCARB2-212ENST00000638663 C8orf34Q49A92 452 aa27.1■■□□□ 1.93
SCARB2-212ENST00000638663 ERBB4Q15303 1308 aa27.1■■□□□ 1.93
SCARB2-212ENST00000638663 ALDH1L1O75891 902 aa27.1■■□□□ 1.93
SCARB2-212ENST00000638663 MARCH10Q8NA82 808 aaPredicted RBP27.1■■□□□ 1.93
SCARB2-212ENST00000638663 NBPF26B4DH59 902 aa27.09■■□□□ 1.93
SCARB2-212ENST00000638663 NBPF7P0C2Y1 421 aaPredicted RBP27.09■■□□□ 1.93
SCARB2-212ENST00000638663 PRIM1P49642 420 aaKnown RBP27.09■■□□□ 1.93
SCARB2-212ENST00000638663 FAM98CQ17RN3 349 aaKnown RBP27.09■■□□□ 1.93
SCARB2-212ENST00000638663 CWF19L2Q2TBE0 894 aaKnown RBP27.09■■□□□ 1.93
SCARB2-212ENST00000638663 NBPF14Q5TI25 921 aa27.09■■□□□ 1.93
SCARB2-212ENST00000638663 NBPF10Q6P3W6 841 aaKnown RBP27.09■■□□□ 1.93
SCARB2-212ENST00000638663 NBPF15Q8N660 670 aa27.09■■□□□ 1.93
SCARB2-212ENST00000638663 A1BGP04217 495 aa27.08■■□□□ 1.93
SCARB2-212ENST00000638663 ANKRD13DQ6ZTN6 518 aa27.08■■□□□ 1.93
SCARB2-212ENST00000638663 LINS1Q8NG48 757 aa27.08■■□□□ 1.93
SCARB2-212ENST00000638663 RBM42Q9BTD8 480 aaKnown RBP27.08■■□□□ 1.93
SCARB2-212ENST00000638663 ATP8B2P98198 1209 aa27.07■■□□□ 1.92
SCARB2-212ENST00000638663 USP21Q9UK80 565 aa27.07■■□□□ 1.92
SCARB2-212ENST00000638663 DOT1LQ8TEK3 1739 aa27.07■■□□□ 1.92
SCARB2-212ENST00000638663 PNMA6EA0A0J9YXQ4 647 aa27.06■■□□□ 1.92
SCARB2-212ENST00000638663 MEX3CQ5U5Q3 659 aaKnown RBP27.05■■□□□ 1.92
SCARB2-212ENST00000638663 VSIG10Q8N0Z9 540 aa27.05■■□□□ 1.92
SCARB2-212ENST00000638663 C9orf78Q9NZ63 289 aaPredicted RBP27.05■■□□□ 1.92
SCARB2-212ENST00000638663 A0A0G2JS52 829 aa27.04■■□□□ 1.92
SCARB2-212ENST00000638663 NEXNQ0ZGT2 675 aa27.04■■□□□ 1.92
SCARB2-212ENST00000638663 METTL22Q9BUU2 404 aaPredicted RBP27.04■■□□□ 1.92
SCARB2-212ENST00000638663 IGKV5-2P06315 115 aa27.04■■□□□ 1.92
SCARB2-212ENST00000638663 DNAJC10Q8IXB1 793 aa27.04■■□□□ 1.92
SCARB2-212ENST00000638663 ACSBG1Q96GR2 724 aa27.04■■□□□ 1.92
SCARB2-212ENST00000638663 MYD88Q99836 296 aa27.03■■□□□ 1.92
SCARB2-212ENST00000638663 APBB1O00213 710 aa27.02■■□□□ 1.92
SCARB2-212ENST00000638663 TEX13AQ9BXU3 409 aaPredicted RBP27.02■■□□□ 1.92
SCARB2-212ENST00000638663 ZBTB47Q9UFB7 747 aaPredicted RBP27.02■■□□□ 1.92
SCARB2-212ENST00000638663 PLBD2Q8NHP8 589 aa27.01■■□□□ 1.91
SCARB2-212ENST00000638663 BCL11AQ9H165 835 aa27.01■■□□□ 1.91
SCARB2-212ENST00000638663 NEURL1BA8MQ27 555 aa27■■□□□ 1.91
SCARB2-212ENST00000638663 TTLL7Q6ZT98 887 aa27■■□□□ 1.91
SCARB2-212ENST00000638663 SLC4A9Q96Q91 983 aa27■■□□□ 1.91
SCARB2-212ENST00000638663 GRM8O00222 908 aa26.99■■□□□ 1.91
SCARB2-212ENST00000638663 MYT1Q01538 1121 aa26.99■■□□□ 1.91
SCARB2-212ENST00000638663 PPP1R42Q7Z4L9 355 aa26.99■■□□□ 1.91
SCARB2-212ENST00000638663 EXOC6BQ9Y2D4 811 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms