RNA–Protein interactions for RNA: ENST00000638334.1

NECAP1-211, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-211ENST00000638334 ZNF530Q6P9A1 599 aaPredicted RBP12.5□□□□□ -0.41
NECAP1-211ENST00000638334 CNTROBQ8N137 903 aa12.5□□□□□ -0.41
NECAP1-211ENST00000638334 ANP32BQ92688 251 aaKnown RBP12.5□□□□□ -0.41
NECAP1-211ENST00000638334 NBPF4Q96M43 638 aa12.5□□□□□ -0.41
NECAP1-211ENST00000638334 UTYO14607 1347 aa12.5□□□□□ -0.41
NECAP1-211ENST00000638334 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
NECAP1-211ENST00000638334 COL15A1P39059 1388 aa12.49□□□□□ -0.41
NECAP1-211ENST00000638334 PNMA6EA0A0J9YXQ4 647 aa12.49□□□□□ -0.41
NECAP1-211ENST00000638334 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
NECAP1-211ENST00000638334 RNMTO43148 476 aaKnown RBP12.49□□□□□ -0.41
NECAP1-211ENST00000638334 GLRX3O76003 335 aaKnown RBP12.49□□□□□ -0.41
NECAP1-211ENST00000638334 GCP02774 474 aa12.49□□□□□ -0.41
NECAP1-211ENST00000638334 ESCO1Q5FWF5 840 aa12.49□□□□□ -0.41
NECAP1-211ENST00000638334 RHPN1Q8TCX5 695 aa12.49□□□□□ -0.41
NECAP1-211ENST00000638334 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
NECAP1-211ENST00000638334 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-211ENST00000638334 KSR2Q6VAB6 950 aa12.48□□□□□ -0.41
NECAP1-211ENST00000638334 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
NECAP1-211ENST00000638334 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
NECAP1-211ENST00000638334 SURF6O75683 361 aaKnown RBP12.47□□□□□ -0.41
NECAP1-211ENST00000638334 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
NECAP1-211ENST00000638334 SSFA2P28290 1259 aa12.47□□□□□ -0.41
NECAP1-211ENST00000638334 HSPA4P34932 840 aa12.47□□□□□ -0.41
NECAP1-211ENST00000638334 HS1BP3Q53T59 392 aa12.47□□□□□ -0.41
NECAP1-211ENST00000638334 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
NECAP1-211ENST00000638334 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
NECAP1-211ENST00000638334 C19orf44Q9H6X5 657 aa12.47□□□□□ -0.41
NECAP1-211ENST00000638334 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
NECAP1-211ENST00000638334 RAD50Q92878 1312 aa12.46□□□□□ -0.41
NECAP1-211ENST00000638334 TRIM6-TRIM34B2RNG4 842 aa12.46□□□□□ -0.41
NECAP1-211ENST00000638334 SGSM2O43147 1006 aa12.46□□□□□ -0.41
NECAP1-211ENST00000638334 SRGAP3O43295 1099 aa12.46□□□□□ -0.41
NECAP1-211ENST00000638334 GIGYF1O75420 1035 aaPredicted RBP12.46□□□□□ -0.41
NECAP1-211ENST00000638334 NEK4P51957 841 aa12.46□□□□□ -0.41
NECAP1-211ENST00000638334 CCDC173Q0VFZ6 552 aa12.46□□□□□ -0.41
NECAP1-211ENST00000638334 CLASRPQ8N2M8 674 aaKnown RBP12.46□□□□□ -0.41
NECAP1-211ENST00000638334 LTV1Q96GA3 475 aaPredicted RBP12.46□□□□□ -0.41
NECAP1-211ENST00000638334 TM6SF1Q9BZW5 370 aa12.46□□□□□ -0.41
NECAP1-211ENST00000638334 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.41
NECAP1-211ENST00000638334 ADCY9O60503 1353 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 PI4KAP2A4QPH2 592 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 KIAA1211Q6ZU35 1233 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 PI4KAP1Q8N8J0 262 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 PI4K2BQ8TCG2 481 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 ANKRD24Q8TF21 1146 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 SYAP1Q96A49 352 aaPredicted RBP12.45□□□□□ -0.42
NECAP1-211ENST00000638334 TMX3Q96JJ7 454 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 CHPF2Q9P2E5 772 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 C1orf167Q5SNV9 1468 aa12.45□□□□□ -0.42
NECAP1-211ENST00000638334 ERBB4Q15303 1308 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 APBB1O00213 710 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 BRD1O95696 1058 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 CLCN1P35523 988 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 NUTM2GQ5VZR2 741 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 KCNB2Q92953 911 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 PPP1R9BQ96SB3 815 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 ANO2Q9NQ90 1003 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 SNRKQ9NRH2 765 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 LMBRD1Q9NUN5 540 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 ATP6V1DQ9Y5K8 247 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 MRC1P22897 1456 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 AK9Q5TCS8 1911 aa12.44□□□□□ -0.42
NECAP1-211ENST00000638334 RFX7Q2KHR2 1363 aa12.43□□□□□ -0.42
NECAP1-211ENST00000638334 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
NECAP1-211ENST00000638334 PHF14O94880 888 aa12.43□□□□□ -0.42
NECAP1-211ENST00000638334 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
NECAP1-211ENST00000638334 RILPL2Q969X0 211 aa12.43□□□□□ -0.42
NECAP1-211ENST00000638334 EVI5LQ96CN4 794 aa12.43□□□□□ -0.42
NECAP1-211ENST00000638334 ZSCAN31Q96LW9 406 aaPredicted RBP12.43□□□□□ -0.42
NECAP1-211ENST00000638334 GZF1Q9H116 711 aaPredicted RBP12.43□□□□□ -0.42
NECAP1-211ENST00000638334 PHAXQ9H814 394 aaKnown RBP12.43□□□□□ -0.42
NECAP1-211ENST00000638334 LGR6Q9HBX8 967 aa12.43□□□□□ -0.42
NECAP1-211ENST00000638334 ECHDC1Q9NTX5 307 aa12.43□□□□□ -0.42
NECAP1-211ENST00000638334 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.43□□□□□ -0.42
NECAP1-211ENST00000638334 ERBB3P21860 1342 aa12.42□□□□□ -0.42
NECAP1-211ENST00000638334 NEXNQ0ZGT2 675 aa12.42□□□□□ -0.42
NECAP1-211ENST00000638334 CSPP1Q1MSJ5 1256 aa12.42□□□□□ -0.42
NECAP1-211ENST00000638334 KRT28Q7Z3Y7 464 aa12.42□□□□□ -0.42
NECAP1-211ENST00000638334 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
NECAP1-211ENST00000638334 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
NECAP1-211ENST00000638334 C9orf78Q9NZ63 289 aaPredicted RBP12.42□□□□□ -0.42
NECAP1-211ENST00000638334 SCN11AQ9UI33 1791 aa12.41□□□□□ -0.42
NECAP1-211ENST00000638334 GRM8O00222 908 aa12.41□□□□□ -0.42
NECAP1-211ENST00000638334 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
NECAP1-211ENST00000638334 TMEM87AQ8NBN3 555 aa12.41□□□□□ -0.42
NECAP1-211ENST00000638334 RAPGEF4Q8WZA2 1011 aa12.41□□□□□ -0.42
NECAP1-211ENST00000638334 CPDO75976 1380 aa12.41□□□□□ -0.42
NECAP1-211ENST00000638334 PARP4Q9UKK3 1724 aaKnown RBP12.4□□□□□ -0.42
NECAP1-211ENST00000638334 LETM1O95202 739 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-211ENST00000638334 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-211ENST00000638334 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-211ENST00000638334 NCLP19338 710 aaKnown RBP12.4□□□□□ -0.42
NECAP1-211ENST00000638334 NASPP49321 788 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-211ENST00000638334 MCTP1Q6DN14 999 aa12.4□□□□□ -0.42
NECAP1-211ENST00000638334 USHBP1Q8N6Y0 703 aa12.4□□□□□ -0.42
NECAP1-211ENST00000638334 ALDH8A1Q9H2A2 487 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-211ENST00000638334 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
NECAP1-211ENST00000638334 PXDNQ92626 1479 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms