RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 MCM5P33992 734 aa12.18□□□□□ -0.46
SMARCA2-265ENST00000638139 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
SMARCA2-265ENST00000638139 PLEKHG5O94827 1062 aa12.18□□□□□ -0.46
SMARCA2-265ENST00000638139 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
SMARCA2-265ENST00000638139 USP48Q86UV5 1035 aa12.18□□□□□ -0.46
SMARCA2-265ENST00000638139 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
SMARCA2-265ENST00000638139 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
SMARCA2-265ENST00000638139 WDR33Q9C0J8 1336 aaKnown RBP12.18□□□□□ -0.46
SMARCA2-265ENST00000638139 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
SMARCA2-265ENST00000638139 TAF7Q15545 349 aaPredicted RBP12.17□□□□□ -0.46
SMARCA2-265ENST00000638139 RAB11FIP3O75154 756 aa12.17□□□□□ -0.46
SMARCA2-265ENST00000638139 PPP1R42Q7Z4L9 355 aa12.17□□□□□ -0.46
SMARCA2-265ENST00000638139 PI4K2BQ8TCG2 481 aa12.17□□□□□ -0.46
SMARCA2-265ENST00000638139 PHAXQ9H814 394 aaKnown RBP12.17□□□□□ -0.46
SMARCA2-265ENST00000638139 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
SMARCA2-265ENST00000638139 SURF6O75683 361 aaKnown RBP12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 HOXC9P31274 260 aa12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 POLA2Q14181 598 aa12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 PDCL3Q9H2J4 239 aa12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 DIP2AQ14689 1571 aa12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 MARF1Q9Y4F3 1742 aaKnown RBP12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 HDGFL1Q5TGJ6 251 aa12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 RHPN1Q8TCX5 695 aa12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 BABAM1Q9NWV8 329 aa12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 RAD50Q92878 1312 aa12.16□□□□□ -0.46
SMARCA2-265ENST00000638139 SGSM2O43147 1006 aa12.15□□□□□ -0.46
SMARCA2-265ENST00000638139 NLRP6P59044 892 aa12.15□□□□□ -0.46
SMARCA2-265ENST00000638139 SNX14Q9Y5W7 946 aa12.15□□□□□ -0.46
SMARCA2-265ENST00000638139 CSPP1Q1MSJ5 1256 aa12.15□□□□□ -0.46
SMARCA2-265ENST00000638139 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
SMARCA2-265ENST00000638139 TTC14Q96N46 770 aa12.15□□□□□ -0.46
SMARCA2-265ENST00000638139 PHF14O94880 888 aa12.14□□□□□ -0.47
SMARCA2-265ENST00000638139 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
SMARCA2-265ENST00000638139 LSG1Q9H089 658 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-265ENST00000638139 RBM10P98175 930 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-265ENST00000638139 NUTM2GQ5VZR2 741 aa12.14□□□□□ -0.47
SMARCA2-265ENST00000638139 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
SMARCA2-265ENST00000638139 LTV1Q96GA3 475 aaPredicted RBP12.14□□□□□ -0.47
SMARCA2-265ENST00000638139 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
SMARCA2-265ENST00000638139 CNPY2Q9Y2B0 182 aa12.14□□□□□ -0.47
SMARCA2-265ENST00000638139 PTMAP06454 111 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 NBPF7P0C2Y1 421 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 AK2P54819 239 aa12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 KIF1BPQ96EK5 621 aa12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 CRYBG1Q9Y4K1 1723 aa12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 UQCRHLA0A096LP55 91 aa12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 UQCRHP07919 91 aa12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 RUFY3Q7L099 469 aa12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 CNTROBQ8N137 903 aa12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMARCA2-265ENST00000638139 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
SMARCA2-265ENST00000638139 EIF2S2P20042 333 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-265ENST00000638139 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
SMARCA2-265ENST00000638139 CCDC183Q5T5S1 534 aa12.12□□□□□ -0.47
SMARCA2-265ENST00000638139 LIMCH1Q9UPQ0 1083 aa12.12□□□□□ -0.47
SMARCA2-265ENST00000638139 EID1Q9Y6B2 187 aa12.12□□□□□ -0.47
SMARCA2-265ENST00000638139 STX6O43752 255 aa12.11□□□□□ -0.47
SMARCA2-265ENST00000638139 SYT1P21579 422 aa12.11□□□□□ -0.47
SMARCA2-265ENST00000638139 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
SMARCA2-265ENST00000638139 FAM184AQ8NB25 1140 aa12.11□□□□□ -0.47
SMARCA2-265ENST00000638139 SPG7Q9UQ90 795 aa12.11□□□□□ -0.47
SMARCA2-265ENST00000638139 USP54Q70EL1 1684 aa12.11□□□□□ -0.47
SMARCA2-265ENST00000638139 CPA1P15085 419 aa12.11□□□□□ -0.47
SMARCA2-265ENST00000638139 BEND3Q5T5X7 828 aa12.11□□□□□ -0.47
SMARCA2-265ENST00000638139 TBX22Q9Y458 520 aa12.11□□□□□ -0.47
SMARCA2-265ENST00000638139 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 SASS6Q6UVJ0 657 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 DNAAF4Q8WXU2 420 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 CHPF2Q9P2E5 772 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 CEMIPQ8WUJ3 1361 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 KDM3BQ7LBC6 1761 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 KIF13AQ9H1H9 1805 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 LARGE1O95461 756 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 F13A1P00488 732 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 UBE2HP62256 183 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 KIAA2012Q0VF49 1180 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 SMC3Q9UQE7 1217 aa12.1□□□□□ -0.47
SMARCA2-265ENST00000638139 SETD1BQ9UPS6 1966 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 USP25Q9UHP3 1055 aa12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 LTN1O94822 1766 aa12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 MED1Q15648 1581 aaPredicted RBP12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 CASTP20810 708 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 MPNDQ8N594 471 aa12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 ABTB2Q8N961 1025 aa12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 ZMYND15Q9H091 742 aa12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 HYPKQ9NX55 129 aa12.09□□□□□ -0.47
SMARCA2-265ENST00000638139 TTC41PQ6P2S7 1318 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms