RNA–Protein interactions for RNA: ENST00000637842.1

RBMS3-220, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 1,458 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-220ENST00000637842 ITGB4P16144 1822 aa13.01□□□□□ -0.33
RBMS3-220ENST00000637842 POLRMTO00411 1230 aaKnown RBP13□□□□□ -0.33
RBMS3-220ENST00000637842 DDNO94850 711 aaPredicted RBP13□□□□□ -0.33
RBMS3-220ENST00000637842 TM4SF1P30408 202 aa13□□□□□ -0.33
RBMS3-220ENST00000637842 RGPD2P0DJD1 1756 aa13□□□□□ -0.33
RBMS3-220ENST00000637842 VIRMAQ69YN4 1812 aaKnown RBP12.99□□□□□ -0.33
RBMS3-220ENST00000637842 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
RBMS3-220ENST00000637842 EIF5BO60841 1220 aaKnown RBP12.98□□□□□ -0.33
RBMS3-220ENST00000637842 RRS1Q15050 365 aaKnown RBP12.98□□□□□ -0.33
RBMS3-220ENST00000637842 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
RBMS3-220ENST00000637842 TAF1DQ9H5J8 278 aaPredicted RBP12.98□□□□□ -0.33
RBMS3-220ENST00000637842 SRP68Q9UHB9 627 aaKnown RBP12.98□□□□□ -0.33
RBMS3-220ENST00000637842 ABT1Q9ULW3 272 aaKnown RBP12.98□□□□□ -0.33
RBMS3-220ENST00000637842 H0YIN7 160 aa12.97□□□□□ -0.33
RBMS3-220ENST00000637842 ECE1P42892 770 aa12.97□□□□□ -0.33
RBMS3-220ENST00000637842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
RBMS3-220ENST00000637842 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
RBMS3-220ENST00000637842 A0A1W2PP64 1363 aa12.97□□□□□ -0.33
RBMS3-220ENST00000637842 KDRP35968 1356 aa12.97□□□□□ -0.33
RBMS3-220ENST00000637842 HSP90AB2PQ58FF8 381 aa12.97□□□□□ -0.33
RBMS3-220ENST00000637842 IFNL2Q8IZJ0 200 aa12.97□□□□□ -0.33
RBMS3-220ENST00000637842 GPR101Q96P66 508 aaPredicted RBP12.97□□□□□ -0.33
RBMS3-220ENST00000637842 INSRP06213 1382 aa12.96□□□□□ -0.33
RBMS3-220ENST00000637842 EAPPQ56P03 285 aaPredicted RBP12.96□□□□□ -0.34
RBMS3-220ENST00000637842 C2CD5Q86YS7 1000 aa12.96□□□□□ -0.34
RBMS3-220ENST00000637842 CA12O43570 354 aa12.95□□□□□ -0.34
RBMS3-220ENST00000637842 ZPR1O75312 459 aa12.95□□□□□ -0.34
RBMS3-220ENST00000637842 DGKZQ13574 1117 aa12.95□□□□□ -0.34
RBMS3-220ENST00000637842 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
RBMS3-220ENST00000637842 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
RBMS3-220ENST00000637842 CAPNS2Q96L46 248 aa12.95□□□□□ -0.34
RBMS3-220ENST00000637842 TIAM2Q8IVF5 1701 aa12.94□□□□□ -0.34
RBMS3-220ENST00000637842 TNRC18O15417 2968 aaPredicted RBP12.94□□□□□ -0.34
RBMS3-220ENST00000637842 PHKG2P15735 406 aa12.94□□□□□ -0.34
RBMS3-220ENST00000637842 PAXIP1Q6ZW49 1069 aaPredicted RBP12.94□□□□□ -0.34
RBMS3-220ENST00000637842 PUS7Q96PZ0 661 aaKnown RBP12.94□□□□□ -0.34
RBMS3-220ENST00000637842 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
RBMS3-220ENST00000637842 MAP2K2P36507 400 aa12.93□□□□□ -0.34
RBMS3-220ENST00000637842 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
RBMS3-220ENST00000637842 PNMA8AQ86V59 439 aaPredicted RBP12.93□□□□□ -0.34
RBMS3-220ENST00000637842 TSKSQ9UJT2 592 aa12.93□□□□□ -0.34
RBMS3-220ENST00000637842 LTBP3Q9NS15 1303 aa12.93□□□□□ -0.34
RBMS3-220ENST00000637842 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
RBMS3-220ENST00000637842 C21orf2O43822 256 aa12.92□□□□□ -0.34
RBMS3-220ENST00000637842 TAOK3Q9H2K8 898 aa12.92□□□□□ -0.34
RBMS3-220ENST00000637842 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
RBMS3-220ENST00000637842 HACL1Q9UJ83 578 aa12.92□□□□□ -0.34
RBMS3-220ENST00000637842 SERPINB2P05120 415 aa12.91□□□□□ -0.34
RBMS3-220ENST00000637842 GRM1Q13255 1194 aa12.91□□□□□ -0.34
RBMS3-220ENST00000637842 USPL1Q5W0Q7 1092 aa12.91□□□□□ -0.34
RBMS3-220ENST00000637842 ZNF622Q969S3 477 aaKnown RBP eCLIP12.91□□□□□ -0.34
RBMS3-220ENST00000637842 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
RBMS3-220ENST00000637842 PDZRN3Q9UPQ7 1066 aa12.91□□□□□ -0.34
RBMS3-220ENST00000637842 CCDC88AQ3V6T2 1871 aa12.91□□□□□ -0.34
RBMS3-220ENST00000637842 NFIXQ14938 502 aa12.91□□□□□ -0.34
RBMS3-220ENST00000637842 MAP1SQ66K74 1059 aaPredicted RBP12.91□□□□□ -0.34
RBMS3-220ENST00000637842 CYP4F22Q6NT55 531 aa12.91□□□□□ -0.34
RBMS3-220ENST00000637842 DDX21Q9NR30 783 aaKnown RBP eCLIP12.91□□□□□ -0.34
RBMS3-220ENST00000637842 FLT4P35916 1363 aa12.9□□□□□ -0.34
RBMS3-220ENST00000637842 KIF24Q5T7B8 1368 aa12.9□□□□□ -0.34
RBMS3-220ENST00000637842 EPHX2P34913 555 aa12.9□□□□□ -0.34
RBMS3-220ENST00000637842 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
RBMS3-220ENST00000637842 SOX10P56693 466 aa12.89□□□□□ -0.35
RBMS3-220ENST00000637842 L3MBTL2Q969R5 705 aa12.89□□□□□ -0.35
RBMS3-220ENST00000637842 TONSLQ96HA7 1378 aa12.88□□□□□ -0.35
RBMS3-220ENST00000637842 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
RBMS3-220ENST00000637842 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
RBMS3-220ENST00000637842 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
RBMS3-220ENST00000637842 FYB1O15117 783 aa12.87□□□□□ -0.35
RBMS3-220ENST00000637842 PDE6BP35913 854 aa12.87□□□□□ -0.35
RBMS3-220ENST00000637842 VSIG10Q8N0Z9 540 aa12.87□□□□□ -0.35
RBMS3-220ENST00000637842 GGNBP2Q9H3C7 697 aa12.87□□□□□ -0.35
RBMS3-220ENST00000637842 NARFQ9UHQ1 456 aa12.87□□□□□ -0.35
RBMS3-220ENST00000637842 SCN4AP35499 1836 aa12.87□□□□□ -0.35
RBMS3-220ENST00000637842 CABP4P57796 275 aa12.86□□□□□ -0.35
RBMS3-220ENST00000637842 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
RBMS3-220ENST00000637842 MYH14Q7Z406 1995 aaKnown RBP12.86□□□□□ -0.35
RBMS3-220ENST00000637842 AOC2O75106 756 aa12.85□□□□□ -0.35
RBMS3-220ENST00000637842 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
RBMS3-220ENST00000637842 DICER1Q9UPY3 1922 aaKnown RBP12.85□□□□□ -0.35
RBMS3-220ENST00000637842 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
RBMS3-220ENST00000637842 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
RBMS3-220ENST00000637842 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
RBMS3-220ENST00000637842 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
RBMS3-220ENST00000637842 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
RBMS3-220ENST00000637842 CNKSR1Q969H4 720 aa12.85□□□□□ -0.35
RBMS3-220ENST00000637842 BRIP1Q9BX63 1249 aa12.85□□□□□ -0.35
RBMS3-220ENST00000637842 TLL2Q9Y6L7 1015 aa12.85□□□□□ -0.35
RBMS3-220ENST00000637842 EYA1Q99502 592 aa12.84□□□□□ -0.35
RBMS3-220ENST00000637842 THSD7BQ9C0I4 1608 aa12.83□□□□□ -0.36
RBMS3-220ENST00000637842 CASP8AP2Q9UKL3 1982 aa12.83□□□□□ -0.36
RBMS3-220ENST00000637842 DLEC1Q9Y238 1755 aa12.83□□□□□ -0.36
RBMS3-220ENST00000637842 HABP4Q5JVS0 413 aaKnown RBP12.82□□□□□ -0.36
RBMS3-220ENST00000637842 CST9Q5W186 159 aa12.82□□□□□ -0.36
RBMS3-220ENST00000637842 SOS1Q07889 1333 aaPredicted RBP12.82□□□□□ -0.36
RBMS3-220ENST00000637842 RNF123Q5XPI4 1314 aa12.82□□□□□ -0.36
RBMS3-220ENST00000637842 FER1L6Q2WGJ9 1857 aa12.81□□□□□ -0.36
RBMS3-220ENST00000637842 PPM1GO15355 546 aaPredicted RBP12.81□□□□□ -0.36
RBMS3-220ENST00000637842 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
RBMS3-220ENST00000637842 CARD11Q9BXL7 1154 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms