RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 SRP68Q9UHB9 627 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-224ENST00000637721 ATP10DQ9P241 1426 aa17.56■□□□□ 0.4
SYNGAP1-224ENST00000637721 A0A087WZG4 1122 aa17.56■□□□□ 0.4
SYNGAP1-224ENST00000637721 TM4SF1P30408 202 aa17.56■□□□□ 0.4
SYNGAP1-224ENST00000637721 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
SYNGAP1-224ENST00000637721 HEG1Q9ULI3 1381 aa17.55■□□□□ 0.4
SYNGAP1-224ENST00000637721 A0A0G2JLW4 131 aa17.55■□□□□ 0.4
SYNGAP1-224ENST00000637721 U2AF1L5P0DN76 240 aaPredicted RBP17.55■□□□□ 0.4
SYNGAP1-224ENST00000637721 U2AF1Q01081 240 aaKnown RBP eCLIP17.55■□□□□ 0.4
SYNGAP1-224ENST00000637721 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
SYNGAP1-224ENST00000637721 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
SYNGAP1-224ENST00000637721 ARFGEF1Q9Y6D6 1849 aa17.54■□□□□ 0.4
SYNGAP1-224ENST00000637721 POLRMTO00411 1230 aaKnown RBP17.54■□□□□ 0.4
SYNGAP1-224ENST00000637721 DPEP1P16444 411 aa17.54■□□□□ 0.4
SYNGAP1-224ENST00000637721 DDR1Q08345 913 aa17.54■□□□□ 0.4
SYNGAP1-224ENST00000637721 PHACTR3Q96KR7 559 aa17.54■□□□□ 0.4
SYNGAP1-224ENST00000637721 FMNL2Q96PY5 1086 aa17.54■□□□□ 0.4
SYNGAP1-224ENST00000637721 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-224ENST00000637721 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-224ENST00000637721 ZNF496Q96IT1 587 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-224ENST00000637721 GPBP1L1Q9HC44 474 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-224ENST00000637721 PIM2Q9P1W9 311 aa17.53■□□□□ 0.4
SYNGAP1-224ENST00000637721 BTBD11A6QL63 1104 aa17.52■□□□□ 0.4
SYNGAP1-224ENST00000637721 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.4
SYNGAP1-224ENST00000637721 WWC3Q9ULE0 1092 aa17.52■□□□□ 0.4
SYNGAP1-224ENST00000637721 NEFMP07197 916 aa17.51■□□□□ 0.39
SYNGAP1-224ENST00000637721 IL6STP40189 918 aaPredicted RBP17.51■□□□□ 0.39
SYNGAP1-224ENST00000637721 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
SYNGAP1-224ENST00000637721 NRXN2Q9P2S2 1712 aa17.51■□□□□ 0.39
SYNGAP1-224ENST00000637721 AFDNP55196 1824 aaKnown RBP17.5■□□□□ 0.39
SYNGAP1-224ENST00000637721 KCNA3P22001 575 aa17.5■□□□□ 0.39
SYNGAP1-224ENST00000637721 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
SYNGAP1-224ENST00000637721 DALRD3Q5D0E6 543 aaKnown RBP17.5■□□□□ 0.39
SYNGAP1-224ENST00000637721 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
SYNGAP1-224ENST00000637721 NFIXQ14938 502 aa17.49■□□□□ 0.39
SYNGAP1-224ENST00000637721 SENP3-EIF4A1A0A087X0R7 540 aa17.48■□□□□ 0.39
SYNGAP1-224ENST00000637721 ARHGAP27Q6ZUM4 889 aa17.48■□□□□ 0.39
SYNGAP1-224ENST00000637721 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
SYNGAP1-224ENST00000637721 BCL2L12Q9HB09 334 aa17.48■□□□□ 0.39
SYNGAP1-224ENST00000637721 SERPINB2P05120 415 aa17.47■□□□□ 0.39
SYNGAP1-224ENST00000637721 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
SYNGAP1-224ENST00000637721 SCN7AQ01118 1682 aa17.47■□□□□ 0.39
SYNGAP1-224ENST00000637721 DLEC1Q9Y238 1755 aa17.45■□□□□ 0.38
SYNGAP1-224ENST00000637721 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
SYNGAP1-224ENST00000637721 MCM10Q7L590 875 aa17.44■□□□□ 0.38
SYNGAP1-224ENST00000637721 CARMIL3Q8ND23 1372 aa17.43■□□□□ 0.38
SYNGAP1-224ENST00000637721 RGL2O15211 777 aa17.43■□□□□ 0.38
SYNGAP1-224ENST00000637721 CHRNA5P30532 468 aa17.43■□□□□ 0.38
SYNGAP1-224ENST00000637721 RALBP1Q15311 655 aa17.43■□□□□ 0.38
SYNGAP1-224ENST00000637721 TAF7Q15545 349 aaPredicted RBP17.43■□□□□ 0.38
SYNGAP1-224ENST00000637721 PNISRQ8TF01 805 aaKnown RBP17.43■□□□□ 0.38
SYNGAP1-224ENST00000637721 ZNF526Q8TF50 670 aaPredicted RBP17.43■□□□□ 0.38
SYNGAP1-224ENST00000637721 H0YIN7 160 aa17.42■□□□□ 0.38
SYNGAP1-224ENST00000637721 KCNQ3O43525 872 aa17.42■□□□□ 0.38
SYNGAP1-224ENST00000637721 A1BGP04217 495 aa17.42■□□□□ 0.38
SYNGAP1-224ENST00000637721 TBC1D2BQ9UPU7 963 aa17.42■□□□□ 0.38
SYNGAP1-224ENST00000637721 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
SYNGAP1-224ENST00000637721 DLG5Q8TDM6 1919 aa17.42■□□□□ 0.38
SYNGAP1-224ENST00000637721 BCORQ6W2J9 1755 aa17.41■□□□□ 0.38
SYNGAP1-224ENST00000637721 PDE6BP35913 854 aa17.41■□□□□ 0.38
SYNGAP1-224ENST00000637721 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
SYNGAP1-224ENST00000637721 CAMTA2O94983 1202 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 C9orf131Q5VYM1 1079 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 BICDL1Q6ZP65 573 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 SETDB2Q96T68 719 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 BRIP1Q9BX63 1249 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 ZNF652Q9Y2D9 606 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 USP16Q9Y5T5 823 aa17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 ZC3H4Q9UPT8 1303 aaKnown RBP17.4■□□□□ 0.38
SYNGAP1-224ENST00000637721 SBF1O95248 1867 aa17.39■□□□□ 0.38
SYNGAP1-224ENST00000637721 KIF3CO14782 793 aa17.39■□□□□ 0.37
SYNGAP1-224ENST00000637721 DCTN1Q14203 1278 aa17.39■□□□□ 0.37
SYNGAP1-224ENST00000637721 NFE2L2Q16236 605 aa17.39■□□□□ 0.37
SYNGAP1-224ENST00000637721 DZIP3Q86Y13 1208 aaKnown RBP17.39■□□□□ 0.37
SYNGAP1-224ENST00000637721 C2CD5Q86YS7 1000 aa17.39■□□□□ 0.37
SYNGAP1-224ENST00000637721 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
SYNGAP1-224ENST00000637721 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
SYNGAP1-224ENST00000637721 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
SYNGAP1-224ENST00000637721 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
SYNGAP1-224ENST00000637721 ST5P78524 1137 aa17.37■□□□□ 0.37
SYNGAP1-224ENST00000637721 CNBD1Q8NA66 436 aa17.37■□□□□ 0.37
SYNGAP1-224ENST00000637721 ANKRD31Q8N7Z5 1873 aa17.37■□□□□ 0.37
SYNGAP1-224ENST00000637721 HSPA6P17066 643 aa17.36■□□□□ 0.37
SYNGAP1-224ENST00000637721 RNF181Q9P0P0 153 aa17.36■□□□□ 0.37
SYNGAP1-224ENST00000637721 KDM2BQ8NHM5 1336 aa17.36■□□□□ 0.37
SYNGAP1-224ENST00000637721 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
SYNGAP1-224ENST00000637721 NPHP1O15259 732 aa17.35■□□□□ 0.37
SYNGAP1-224ENST00000637721 TOMM70O94826 608 aa17.35■□□□□ 0.37
SYNGAP1-224ENST00000637721 LMNB1P20700 586 aa17.34■□□□□ 0.37
SYNGAP1-224ENST00000637721 CNKSR1Q969H4 720 aa17.33■□□□□ 0.36
SYNGAP1-224ENST00000637721 ZNF622Q969S3 477 aaKnown RBP eCLIP17.33■□□□□ 0.36
SYNGAP1-224ENST00000637721 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
SYNGAP1-224ENST00000637721 MYBBP1AQ9BQG0 1328 aaKnown RBP17.32■□□□□ 0.36
SYNGAP1-224ENST00000637721 NBPF26B4DH59 902 aa17.32■□□□□ 0.36
SYNGAP1-224ENST00000637721 LMOD3Q0VAK6 560 aa17.32■□□□□ 0.36
SYNGAP1-224ENST00000637721 SOGA3Q5TF21 947 aa17.32■□□□□ 0.36
SYNGAP1-224ENST00000637721 STYK1Q6J9G0 422 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms