RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 SCN11AQ9UI33 1791 aa19■□□□□ 0.63
SCN8A-214ENST00000637709 SRGAP3O43295 1099 aa18.99■□□□□ 0.63
SCN8A-214ENST00000637709 CDC45O75419 566 aa18.99■□□□□ 0.63
SCN8A-214ENST00000637709 NUTM1Q86Y26 1132 aa18.99■□□□□ 0.63
SCN8A-214ENST00000637709 CD2BP2O95400 341 aaKnown RBP18.98■□□□□ 0.63
SCN8A-214ENST00000637709 MAP4K4O95819 1239 aaPredicted RBP18.98■□□□□ 0.63
SCN8A-214ENST00000637709 LARP1Q6PKG0 1096 aaKnown RBP18.98■□□□□ 0.63
SCN8A-214ENST00000637709 FOXD4L1Q9NU39 408 aa18.98■□□□□ 0.63
SCN8A-214ENST00000637709 NCOA3Q9Y6Q9 1424 aa18.98■□□□□ 0.63
SCN8A-214ENST00000637709 SURF6O75683 361 aaKnown RBP18.98■□□□□ 0.63
SCN8A-214ENST00000637709 DEKP35659 375 aaKnown RBP18.98■□□□□ 0.63
SCN8A-214ENST00000637709 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
SCN8A-214ENST00000637709 PDE1AP54750 535 aa18.97■□□□□ 0.63
SCN8A-214ENST00000637709 PDIA6Q15084 440 aa18.97■□□□□ 0.63
SCN8A-214ENST00000637709 SOS1Q07889 1333 aaPredicted RBP18.97■□□□□ 0.63
SCN8A-214ENST00000637709 HOXB7P09629 217 aa18.96■□□□□ 0.63
SCN8A-214ENST00000637709 KIF2CQ99661 725 aa18.96■□□□□ 0.63
SCN8A-214ENST00000637709 C9orf78Q9NZ63 289 aaPredicted RBP18.96■□□□□ 0.63
SCN8A-214ENST00000637709 SOS2Q07890 1332 aaPredicted RBP18.96■□□□□ 0.63
SCN8A-214ENST00000637709 CABP4P57796 275 aa18.96■□□□□ 0.63
SCN8A-214ENST00000637709 TTC5Q8N0Z6 440 aa18.95■□□□□ 0.62
SCN8A-214ENST00000637709 PA2G4Q9UQ80 394 aaKnown RBP18.95■□□□□ 0.62
SCN8A-214ENST00000637709 HEG1Q9ULI3 1381 aa18.95■□□□□ 0.62
SCN8A-214ENST00000637709 RILPL2Q969X0 211 aa18.95■□□□□ 0.62
SCN8A-214ENST00000637709 N4BP2Q86UW6 1770 aaPredicted RBP18.95■□□□□ 0.62
SCN8A-214ENST00000637709 XAGE3Q8WTP9 111 aa18.94■□□□□ 0.62
SCN8A-214ENST00000637709 EVA1CP58658 441 aa18.94■□□□□ 0.62
SCN8A-214ENST00000637709 COPS6Q7L5N1 327 aa18.94■□□□□ 0.62
SCN8A-214ENST00000637709 UNC5CLQ8IV45 518 aa18.94■□□□□ 0.62
SCN8A-214ENST00000637709 IBTKQ9P2D0 1353 aaPredicted RBP18.94■□□□□ 0.62
SCN8A-214ENST00000637709 TRIM6-TRIM34B2RNG4 842 aa18.93■□□□□ 0.62
SCN8A-214ENST00000637709 PTCD1O75127 700 aaKnown RBP18.93■□□□□ 0.62
SCN8A-214ENST00000637709 KSR2Q6VAB6 950 aa18.93■□□□□ 0.62
SCN8A-214ENST00000637709 RIC3Q7Z5B4 369 aa18.93■□□□□ 0.62
SCN8A-214ENST00000637709 DCAF5Q96JK2 942 aa18.93■□□□□ 0.62
SCN8A-214ENST00000637709 WDR17Q8IZU2 1322 aa18.93■□□□□ 0.62
SCN8A-214ENST00000637709 PXDNLA1KZ92 1463 aa18.93■□□□□ 0.62
SCN8A-214ENST00000637709 MX1P20591 662 aa18.93■□□□□ 0.62
SCN8A-214ENST00000637709 RBM25P49756 843 aaKnown RBP18.93■□□□□ 0.62
SCN8A-214ENST00000637709 MYT1Q01538 1121 aa18.92■□□□□ 0.62
SCN8A-214ENST00000637709 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
SCN8A-214ENST00000637709 CPDO75976 1380 aa18.92■□□□□ 0.62
SCN8A-214ENST00000637709 KLHDC4Q8TBB5 520 aa18.92■□□□□ 0.62
SCN8A-214ENST00000637709 SSH3Q8TE77 659 aa18.92■□□□□ 0.62
SCN8A-214ENST00000637709 ADAMTS7Q9UKP4 1686 aa18.92■□□□□ 0.62
SCN8A-214ENST00000637709 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
SCN8A-214ENST00000637709 ZCRB1Q8TBF4 217 aaKnown RBP18.91■□□□□ 0.62
SCN8A-214ENST00000637709 ANTXR1Q9H6X2 564 aa18.91■□□□□ 0.62
SCN8A-214ENST00000637709 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
SCN8A-214ENST00000637709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.91■□□□□ 0.62
SCN8A-214ENST00000637709 OVOS2A0A0G2JMS6 1433 aa18.9■□□□□ 0.62
SCN8A-214ENST00000637709 ATP5J2-PTCD1G3V325 749 aa18.9■□□□□ 0.62
SCN8A-214ENST00000637709 IGKV5-2P06315 115 aa18.9■□□□□ 0.62
SCN8A-214ENST00000637709 OS9Q13438 667 aaPredicted RBP18.9■□□□□ 0.62
SCN8A-214ENST00000637709 HSCBQ8IWL3 235 aa18.9■□□□□ 0.62
SCN8A-214ENST00000637709 MYD88Q99836 296 aa18.9■□□□□ 0.62
SCN8A-214ENST00000637709 SUCLG2Q96I99 432 aa18.9■□□□□ 0.62
SCN8A-214ENST00000637709 SIL1Q9H173 461 aa18.9■□□□□ 0.62
SCN8A-214ENST00000637709 SALL3Q9BXA9 1300 aa18.89■□□□□ 0.61
SCN8A-214ENST00000637709 BTG4Q9NY30 223 aa18.89■□□□□ 0.61
SCN8A-214ENST00000637709 POLA2Q14181 598 aa18.88■□□□□ 0.61
SCN8A-214ENST00000637709 RHPN1Q8TCX5 695 aa18.88■□□□□ 0.61
SCN8A-214ENST00000637709 KAZALD1Q96I82 304 aa18.88■□□□□ 0.61
SCN8A-214ENST00000637709 BICC1Q9H694 974 aaKnown RBP18.88■□□□□ 0.61
SCN8A-214ENST00000637709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.88■□□□□ 0.61
SCN8A-214ENST00000637709 ZNF330Q9Y3S2 320 aaPredicted RBP18.88■□□□□ 0.61
SCN8A-214ENST00000637709 PKD1L3Q7Z443 1732 aa18.88■□□□□ 0.61
SCN8A-214ENST00000637709 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
SCN8A-214ENST00000637709 SNRPA1P09661 255 aaKnown RBP18.87■□□□□ 0.61
SCN8A-214ENST00000637709 FMNL2Q96PY5 1086 aa18.87■□□□□ 0.61
SCN8A-214ENST00000637709 IL25Q9H293 177 aa18.87■□□□□ 0.61
SCN8A-214ENST00000637709 IL2RBP14784 551 aa18.86■□□□□ 0.61
SCN8A-214ENST00000637709 USP26Q9BXU7 913 aa18.86■□□□□ 0.61
SCN8A-214ENST00000637709 GRM8O00222 908 aa18.86■□□□□ 0.61
SCN8A-214ENST00000637709 A1BGP04217 495 aa18.85■□□□□ 0.61
SCN8A-214ENST00000637709 EPHA10Q5JZY3 1008 aa18.85■□□□□ 0.61
SCN8A-214ENST00000637709 AK9Q5TCS8 1911 aa18.85■□□□□ 0.61
SCN8A-214ENST00000637709 DDX58O95786 925 aaKnown RBP18.85■□□□□ 0.61
SCN8A-214ENST00000637709 PCDH11XQ9BZA7 1347 aa18.85■□□□□ 0.61
SCN8A-214ENST00000637709 PCDH11YQ9BZA8 1340 aa18.85■□□□□ 0.61
SCN8A-214ENST00000637709 HSP90AB1P08238 724 aaKnown RBP18.84■□□□□ 0.61
SCN8A-214ENST00000637709 LINS1Q8NG48 757 aa18.84■□□□□ 0.61
SCN8A-214ENST00000637709 ANKRD13DQ6ZTN6 518 aa18.84■□□□□ 0.61
SCN8A-214ENST00000637709 OSBPL3Q9H4L5 887 aa18.84■□□□□ 0.61
SCN8A-214ENST00000637709 NEURL1BA8MQ27 555 aa18.83■□□□□ 0.61
SCN8A-214ENST00000637709 LRP10Q7Z4F1 713 aa18.83■□□□□ 0.61
SCN8A-214ENST00000637709 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.61
SCN8A-214ENST00000637709 NBPF26B4DH59 902 aa18.83■□□□□ 0.6
SCN8A-214ENST00000637709 NBPF14Q5TI25 921 aa18.83■□□□□ 0.6
SCN8A-214ENST00000637709 NBPF10Q6P3W6 841 aaKnown RBP18.83■□□□□ 0.6
SCN8A-214ENST00000637709 CASC1Q6TDU7 716 aa18.83■□□□□ 0.6
SCN8A-214ENST00000637709 NBPF15Q8N660 670 aa18.83■□□□□ 0.6
SCN8A-214ENST00000637709 A0A0G2JS52 829 aa18.82■□□□□ 0.6
SCN8A-214ENST00000637709 TTLL7Q6ZT98 887 aa18.82■□□□□ 0.6
SCN8A-214ENST00000637709 HSP90AA1P07900 732 aaKnown RBP18.82■□□□□ 0.6
SCN8A-214ENST00000637709 UBE3BQ7Z3V4 1068 aa18.82■□□□□ 0.6
SCN8A-214ENST00000637709 ARXQ96QS3 562 aa18.82■□□□□ 0.6
SCN8A-214ENST00000637709 CARD10Q9BWT7 1032 aa18.82■□□□□ 0.6
SCN8A-214ENST00000637709 CHMP4AQ9BY43 222 aa18.82■□□□□ 0.6
SCN8A-214ENST00000637709 PARP4Q9UKK3 1724 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms