RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 HMOX1P09601 288 aa11.93□□□□□ -0.5
CLN8-214ENST00000637594 CHRNA5P30532 468 aa11.93□□□□□ -0.5
CLN8-214ENST00000637594 FSTL1Q12841 308 aa11.93□□□□□ -0.5
CLN8-214ENST00000637594 NFIXQ14938 502 aa11.93□□□□□ -0.5
CLN8-214ENST00000637594 BCL2L12Q9HB09 334 aa11.93□□□□□ -0.5
CLN8-214ENST00000637594 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
CLN8-214ENST00000637594 KDM2BQ8NHM5 1336 aa11.92□□□□□ -0.5
CLN8-214ENST00000637594 TJP1Q07157 1748 aa11.92□□□□□ -0.5
CLN8-214ENST00000637594 EIF5P55010 431 aaKnown RBP11.92□□□□□ -0.5
CLN8-214ENST00000637594 TEX13AQ9BXU3 409 aaPredicted RBP11.92□□□□□ -0.5
CLN8-214ENST00000637594 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
CLN8-214ENST00000637594 ARFGEF1Q9Y6D6 1849 aa11.91□□□□□ -0.5
CLN8-214ENST00000637594 A0A087WZG4 1122 aa11.91□□□□□ -0.5
CLN8-214ENST00000637594 STARD3NLO95772 234 aa11.91□□□□□ -0.5
CLN8-214ENST00000637594 SERPINB2P05120 415 aa11.91□□□□□ -0.5
CLN8-214ENST00000637594 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
CLN8-214ENST00000637594 KCPQ6ZWJ8 1503 aa11.91□□□□□ -0.5
CLN8-214ENST00000637594 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
CLN8-214ENST00000637594 RNF181Q9P0P0 153 aa11.9□□□□□ -0.5
CLN8-214ENST00000637594 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
CLN8-214ENST00000637594 COL15A1P39059 1388 aa11.9□□□□□ -0.5
CLN8-214ENST00000637594 GNAT3A8MTJ3 354 aa11.89□□□□□ -0.51
CLN8-214ENST00000637594 ZNF790Q6PG37 636 aa11.89□□□□□ -0.51
CLN8-214ENST00000637594 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
CLN8-214ENST00000637594 TTLL6Q8N841 843 aa11.89□□□□□ -0.51
CLN8-214ENST00000637594 RRAGCQ9HB90 399 aa11.89□□□□□ -0.51
CLN8-214ENST00000637594 H0YIN7 160 aa11.88□□□□□ -0.51
CLN8-214ENST00000637594 LMNB1P20700 586 aa11.88□□□□□ -0.51
CLN8-214ENST00000637594 CC2D1BQ5T0F9 858 aaKnown RBP11.88□□□□□ -0.51
CLN8-214ENST00000637594 TTC5Q8N0Z6 440 aa11.88□□□□□ -0.51
CLN8-214ENST00000637594 GAS2L2Q8NHY3 880 aa11.88□□□□□ -0.51
CLN8-214ENST00000637594 ZNF496Q96IT1 587 aaPredicted RBP11.88□□□□□ -0.51
CLN8-214ENST00000637594 NRXN2Q9P2S2 1712 aa11.88□□□□□ -0.51
CLN8-214ENST00000637594 GLTPD2A6NH11 291 aa11.87□□□□□ -0.51
CLN8-214ENST00000637594 CANXP27824 592 aaKnown RBP11.87□□□□□ -0.51
CLN8-214ENST00000637594 IL6STP40189 918 aaPredicted RBP11.87□□□□□ -0.51
CLN8-214ENST00000637594 JMYQ8N9B5 988 aa11.87□□□□□ -0.51
CLN8-214ENST00000637594 BRIP1Q9BX63 1249 aa11.87□□□□□ -0.51
CLN8-214ENST00000637594 PRELPP51888 382 aa11.86□□□□□ -0.51
CLN8-214ENST00000637594 TEFQ10587 303 aa11.86□□□□□ -0.51
CLN8-214ENST00000637594 C2CD5Q86YS7 1000 aa11.86□□□□□ -0.51
CLN8-214ENST00000637594 KLRG1Q96E93 195 aa11.86□□□□□ -0.51
CLN8-214ENST00000637594 CEMIPQ8WUJ3 1361 aa11.86□□□□□ -0.51
CLN8-214ENST00000637594 HEG1Q9ULI3 1381 aa11.86□□□□□ -0.51
CLN8-214ENST00000637594 COL3A1P02461 1466 aaPredicted RBP11.85□□□□□ -0.51
CLN8-214ENST00000637594 VEGFAP15692 232 aaPredicted RBP11.85□□□□□ -0.51
CLN8-214ENST00000637594 PDE6BP35913 854 aa11.85□□□□□ -0.51
CLN8-214ENST00000637594 TBC1D9BQ66K14 1250 aa11.85□□□□□ -0.51
CLN8-214ENST00000637594 SMC1BQ8NDV3 1235 aa11.85□□□□□ -0.51
CLN8-214ENST00000637594 FMNL2Q96PY5 1086 aa11.85□□□□□ -0.51
CLN8-214ENST00000637594 SBF1O95248 1867 aa11.85□□□□□ -0.51
CLN8-214ENST00000637594 U2SURPO15042 1029 aaKnown RBP11.84□□□□□ -0.51
CLN8-214ENST00000637594 RASSF7Q02833 373 aa11.84□□□□□ -0.51
CLN8-214ENST00000637594 PHACTR3Q96KR7 559 aa11.84□□□□□ -0.51
CLN8-214ENST00000637594 UBR2Q8IWV8 1755 aa11.84□□□□□ -0.51
CLN8-214ENST00000637594 NFKBIEO00221 500 aa11.83□□□□□ -0.52
CLN8-214ENST00000637594 RGL2O15211 777 aa11.83□□□□□ -0.52
CLN8-214ENST00000637594 CAMTA2O94983 1202 aa11.83□□□□□ -0.52
CLN8-214ENST00000637594 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
CLN8-214ENST00000637594 CLEC4GQ6UXB4 293 aa11.83□□□□□ -0.52
CLN8-214ENST00000637594 TBC1D2BQ9UPU7 963 aa11.83□□□□□ -0.52
CLN8-214ENST00000637594 AFDNP55196 1824 aaKnown RBP11.83□□□□□ -0.52
CLN8-214ENST00000637594 BTBD11A6QL63 1104 aa11.82□□□□□ -0.52
CLN8-214ENST00000637594 POTECB2RU33 542 aa11.82□□□□□ -0.52
CLN8-214ENST00000637594 A1BGP04217 495 aa11.82□□□□□ -0.52
CLN8-214ENST00000637594 DPY19L2Q6NUT2 758 aa11.82□□□□□ -0.52
CLN8-214ENST00000637594 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
CLN8-214ENST00000637594 SETDB2Q96T68 719 aa11.82□□□□□ -0.52
CLN8-214ENST00000637594 RSPH6AQ9H0K4 717 aa11.82□□□□□ -0.52
CLN8-214ENST00000637594 LTBP3Q9NS15 1303 aa11.82□□□□□ -0.52
CLN8-214ENST00000637594 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
CLN8-214ENST00000637594 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
CLN8-214ENST00000637594 STYK1Q6J9G0 422 aa11.81□□□□□ -0.52
CLN8-214ENST00000637594 CNKSR1Q969H4 720 aa11.81□□□□□ -0.52
CLN8-214ENST00000637594 ZNF622Q969S3 477 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLN8-214ENST00000637594 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
CLN8-214ENST00000637594 NUDCQ9Y266 331 aa11.81□□□□□ -0.52
CLN8-214ENST00000637594 USP16Q9Y5T5 823 aa11.81□□□□□ -0.52
CLN8-214ENST00000637594 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
CLN8-214ENST00000637594 KLRG2A4D1S0 409 aaPredicted RBP11.8□□□□□ -0.52
CLN8-214ENST00000637594 KCNQ3O43525 872 aa11.8□□□□□ -0.52
CLN8-214ENST00000637594 C21orf2O43822 256 aa11.8□□□□□ -0.52
CLN8-214ENST00000637594 SRGNP10124 158 aa11.8□□□□□ -0.52
CLN8-214ENST00000637594 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
CLN8-214ENST00000637594 HTRA3P83110 453 aa11.8□□□□□ -0.52
CLN8-214ENST00000637594 C7orf43Q8WVR3 580 aa11.8□□□□□ -0.52
CLN8-214ENST00000637594 TNRC6CQ9HCJ0 1690 aaKnown RBP11.8□□□□□ -0.52
CLN8-214ENST00000637594 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
CLN8-214ENST00000637594 SOGA3Q5TF21 947 aa11.79□□□□□ -0.52
CLN8-214ENST00000637594 NPM2Q86SE8 214 aaKnown RBP11.79□□□□□ -0.52
CLN8-214ENST00000637594 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
CLN8-214ENST00000637594 MASTLQ96GX5 879 aa11.79□□□□□ -0.52
CLN8-214ENST00000637594 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
CLN8-214ENST00000637594 WDR90Q96KV7 1748 aa11.78□□□□□ -0.52
CLN8-214ENST00000637594 SIPA1L3O60292 1781 aaPredicted RBP11.78□□□□□ -0.52
CLN8-214ENST00000637594 ST5P78524 1137 aa11.78□□□□□ -0.52
CLN8-214ENST00000637594 ERFEQ4G0M1 354 aa11.78□□□□□ -0.52
CLN8-214ENST00000637594 CNBD1Q8NA66 436 aa11.78□□□□□ -0.52
CLN8-214ENST00000637594 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
CLN8-214ENST00000637594 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms