RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 SIPA1L3O60292 1781 aaPredicted RBP30.51■■■□□ 2.47
CHRNA7-229ENST00000637552 U2AF1L5P0DN76 240 aaPredicted RBP30.5■■■□□ 2.47
CHRNA7-229ENST00000637552 U2AF1Q01081 240 aaKnown RBP eCLIP30.5■■■□□ 2.47
CHRNA7-229ENST00000637552 STARD3NLO95772 234 aa30.49■■■□□ 2.47
CHRNA7-229ENST00000637552 ZNF790Q6PG37 636 aa30.49■■■□□ 2.47
CHRNA7-229ENST00000637552 PHACTR3Q96KR7 559 aa30.49■■■□□ 2.47
CHRNA7-229ENST00000637552 GPBP1L1Q9HC44 474 aaPredicted RBP30.49■■■□□ 2.47
CHRNA7-229ENST00000637552 SENP3-EIF4A1A0A087X0R7 540 aa30.48■■■□□ 2.47
CHRNA7-229ENST00000637552 CANXP27824 592 aaKnown RBP30.48■■■□□ 2.47
CHRNA7-229ENST00000637552 NARFQ9UHQ1 456 aa30.48■■■□□ 2.47
CHRNA7-229ENST00000637552 BRCA1P38398 1863 aaKnown RBP30.48■■■□□ 2.47
CHRNA7-229ENST00000637552 FCHSD2O94868 740 aa30.47■■■□□ 2.47
CHRNA7-229ENST00000637552 ZNF496Q96IT1 587 aaPredicted RBP30.47■■■□□ 2.47
CHRNA7-229ENST00000637552 CEMIPQ8WUJ3 1361 aa30.46■■■□□ 2.47
CHRNA7-229ENST00000637552 HEG1Q9ULI3 1381 aa30.46■■■□□ 2.47
CHRNA7-229ENST00000637552 POLRMTO00411 1230 aaKnown RBP30.46■■■□□ 2.47
CHRNA7-229ENST00000637552 ZNF526Q8TF50 670 aaPredicted RBP30.46■■■□□ 2.47
CHRNA7-229ENST00000637552 TM4SF1P30408 202 aa30.45■■■□□ 2.47
CHRNA7-229ENST00000637552 TEX13AQ9BXU3 409 aaPredicted RBP30.44■■■□□ 2.46
CHRNA7-229ENST00000637552 FMNL2Q96PY5 1086 aa30.43■■■□□ 2.46
CHRNA7-229ENST00000637552 PIM2Q9P1W9 311 aa30.43■■■□□ 2.46
CHRNA7-229ENST00000637552 ARHGAP27Q6ZUM4 889 aa30.42■■■□□ 2.46
CHRNA7-229ENST00000637552 RTF1Q92541 710 aaKnown RBP30.42■■■□□ 2.46
CHRNA7-229ENST00000637552 ARFGEF1Q9Y6D6 1849 aa30.41■■■□□ 2.46
CHRNA7-229ENST00000637552 A0A087WZG4 1122 aa30.41■■■□□ 2.46
CHRNA7-229ENST00000637552 BTBD11A6QL63 1104 aa30.41■■■□□ 2.46
CHRNA7-229ENST00000637552 NFIXQ14938 502 aa30.41■■■□□ 2.46
CHRNA7-229ENST00000637552 KCNA3P22001 575 aa30.4■■■□□ 2.46
CHRNA7-229ENST00000637552 AFDNP55196 1824 aaKnown RBP30.4■■■□□ 2.46
CHRNA7-229ENST00000637552 EIF5P55010 431 aaKnown RBP30.39■■■□□ 2.46
CHRNA7-229ENST00000637552 DALRD3Q5D0E6 543 aaKnown RBP30.39■■■□□ 2.46
CHRNA7-229ENST00000637552 BCL2L12Q9HB09 334 aa30.39■■■□□ 2.46
CHRNA7-229ENST00000637552 ZNF330Q9Y3S2 320 aaPredicted RBP30.39■■■□□ 2.46
CHRNA7-229ENST00000637552 CHRNA5P30532 468 aa30.38■■■□□ 2.45
CHRNA7-229ENST00000637552 MCM10Q7L590 875 aa30.36■■■□□ 2.45
CHRNA7-229ENST00000637552 NPM2Q86SE8 214 aaKnown RBP30.36■■■□□ 2.45
CHRNA7-229ENST00000637552 NRXN2Q9P2S2 1712 aa30.36■■■□□ 2.45
CHRNA7-229ENST00000637552 SERPINB2P05120 415 aa30.35■■■□□ 2.45
CHRNA7-229ENST00000637552 SCN7AQ01118 1682 aa30.34■■■□□ 2.45
CHRNA7-229ENST00000637552 KCNQ3O43525 872 aa30.34■■■□□ 2.45
CHRNA7-229ENST00000637552 NEFMP07197 916 aa30.34■■■□□ 2.45
CHRNA7-229ENST00000637552 IL6STP40189 918 aaPredicted RBP30.34■■■□□ 2.45
CHRNA7-229ENST00000637552 BICDL1Q6ZP65 573 aa30.33■■■□□ 2.45
CHRNA7-229ENST00000637552 HTATSF1O43719 755 aaKnown RBP30.31■■■□□ 2.44
CHRNA7-229ENST00000637552 A1BGP04217 495 aa30.31■■■□□ 2.44
CHRNA7-229ENST00000637552 TBC1D2BQ9UPU7 963 aa30.31■■■□□ 2.44
CHRNA7-229ENST00000637552 DCTN1Q14203 1278 aa30.3■■■□□ 2.44
CHRNA7-229ENST00000637552 TBC1D9BQ66K14 1250 aa30.27■■■□□ 2.44
CHRNA7-229ENST00000637552 DLEC1Q9Y238 1755 aa30.26■■■□□ 2.44
CHRNA7-229ENST00000637552 SNRPA1P09661 255 aaKnown RBP30.26■■■□□ 2.43
CHRNA7-229ENST00000637552 C9orf131Q5VYM1 1079 aa30.26■■■□□ 2.43
CHRNA7-229ENST00000637552 USP16Q9Y5T5 823 aa30.26■■■□□ 2.43
CHRNA7-229ENST00000637552 CARMIL3Q8ND23 1372 aa30.26■■■□□ 2.43
CHRNA7-229ENST00000637552 C2CD5Q86YS7 1000 aa30.24■■■□□ 2.43
CHRNA7-229ENST00000637552 PRAMEF22A3QJZ6 481 aa30.23■■■□□ 2.43
CHRNA7-229ENST00000637552 H0YIN7 160 aa30.23■■■□□ 2.43
CHRNA7-229ENST00000637552 KIF3CO14782 793 aa30.23■■■□□ 2.43
CHRNA7-229ENST00000637552 DZIP3Q86Y13 1208 aaKnown RBP30.23■■■□□ 2.43
CHRNA7-229ENST00000637552 DLG5Q8TDM6 1919 aa30.23■■■□□ 2.43
CHRNA7-229ENST00000637552 BCORQ6W2J9 1755 aa30.23■■■□□ 2.43
CHRNA7-229ENST00000637552 CAMTA2O94983 1202 aa30.22■■■□□ 2.43
CHRNA7-229ENST00000637552 PIP4K2AP48426 406 aaPredicted RBP30.22■■■□□ 2.43
CHRNA7-229ENST00000637552 TAF7Q15545 349 aaPredicted RBP30.22■■■□□ 2.43
CHRNA7-229ENST00000637552 RNF181Q9P0P0 153 aa30.22■■■□□ 2.43
CHRNA7-229ENST00000637552 TTLL6Q8N841 843 aa30.21■■■□□ 2.43
CHRNA7-229ENST00000637552 SETDB2Q96T68 719 aa30.21■■■□□ 2.43
CHRNA7-229ENST00000637552 NPHP1O15259 732 aa30.2■■■□□ 2.43
CHRNA7-229ENST00000637552 PNNQ9H307 717 aaKnown RBP30.2■■■□□ 2.43
CHRNA7-229ENST00000637552 MAPK8IP3Q9UPT6 1336 aa30.2■■■□□ 2.42
CHRNA7-229ENST00000637552 ANKRD31Q8N7Z5 1873 aa30.19■■■□□ 2.42
CHRNA7-229ENST00000637552 PRR5LQ6MZQ0 368 aa30.19■■■□□ 2.42
CHRNA7-229ENST00000637552 PDE6BP35913 854 aa30.18■■■□□ 2.42
CHRNA7-229ENST00000637552 PDZRN3Q9UPQ7 1066 aa30.18■■■□□ 2.42
CHRNA7-229ENST00000637552 SBF1O95248 1867 aa30.18■■■□□ 2.42
CHRNA7-229ENST00000637552 NFE2L2Q16236 605 aa30.17■■■□□ 2.42
CHRNA7-229ENST00000637552 CNBD1Q8NA66 436 aa30.17■■■□□ 2.42
CHRNA7-229ENST00000637552 PNISRQ8TF01 805 aaKnown RBP30.17■■■□□ 2.42
CHRNA7-229ENST00000637552 PLEKHF1Q96S99 279 aa30.17■■■□□ 2.42
CHRNA7-229ENST00000637552 BRIP1Q9BX63 1249 aa30.17■■■□□ 2.42
CHRNA7-229ENST00000637552 MIS18AQ9NYP9 233 aa30.17■■■□□ 2.42
CHRNA7-229ENST00000637552 CCDC24Q8N4L8 307 aa30.16■■■□□ 2.42
CHRNA7-229ENST00000637552 ZNF652Q9Y2D9 606 aa30.16■■■□□ 2.42
CHRNA7-229ENST00000637552 CEP350Q5VT06 3117 aa30.15■■■□□ 2.42
CHRNA7-229ENST00000637552 HSPA6P17066 643 aa30.15■■■□□ 2.42
CHRNA7-229ENST00000637552 RASSF7Q02833 373 aa30.15■■■□□ 2.42
CHRNA7-229ENST00000637552 RALBP1Q15311 655 aa30.15■■■□□ 2.42
CHRNA7-229ENST00000637552 NMRK2Q9NPI5 230 aa30.15■■■□□ 2.42
CHRNA7-229ENST00000637552 LAMB4A4D0S4 1761 aa30.15■■■□□ 2.42
CHRNA7-229ENST00000637552 ST5P78524 1137 aa30.14■■■□□ 2.42
CHRNA7-229ENST00000637552 ZNF622Q969S3 477 aaKnown RBP eCLIP30.14■■■□□ 2.42
CHRNA7-229ENST00000637552 COL11A2P13942 1736 aaPredicted RBP30.13■■■□□ 2.41
CHRNA7-229ENST00000637552 KDM3BQ7LBC6 1761 aa30.13■■■□□ 2.41
CHRNA7-229ENST00000637552 CLEC4GQ6UXB4 293 aa30.13■■■□□ 2.41
CHRNA7-229ENST00000637552 KDM2BQ8NHM5 1336 aa30.13■■■□□ 2.41
CHRNA7-229ENST00000637552 NBPF26B4DH59 902 aa30.12■■■□□ 2.41
CHRNA7-229ENST00000637552 NBPF10Q6P3W6 841 aaKnown RBP30.12■■■□□ 2.41
CHRNA7-229ENST00000637552 NBPF15Q8N660 670 aa30.12■■■□□ 2.41
CHRNA7-229ENST00000637552 TOMM70O94826 608 aa30.11■■■□□ 2.41
CHRNA7-229ENST00000637552 THUMPD2Q9BTF0 503 aaKnown RBP30.1■■■□□ 2.41
CHRNA7-229ENST00000637552 LMNB1P20700 586 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms