RNA–Protein interactions for RNA: ENST00000637424.1

CACNA1D-224, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1D, Length 6,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-224ENST00000637424 CACNA2D4Q7Z3S7 1137 aa8.66□□□□□ -1.02
CACNA1D-224ENST00000637424 TTC14Q96N46 770 aa8.66□□□□□ -1.02
CACNA1D-224ENST00000637424 SWAP70Q9UH65 585 aa8.66□□□□□ -1.02
CACNA1D-224ENST00000637424 MCM6Q14566 821 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 CCDC129Q6ZRS4 1044 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 CCDC50Q8IVM0 306 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 CPLX3Q8WVH0 158 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 SLC4A2P04920 1241 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 SOGA3Q5TF21 947 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 CCDC155Q8N6L0 562 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 ZSWIM4Q9H7M6 989 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 ANKRD30BQ9BXX2 1392 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 AACSQ86V21 672 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 TMEM57Q8N5G2 664 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 ARFGAP2Q8N6H7 521 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 DDX12PQ92771 950 aa8.65□□□□□ -1.02
CACNA1D-224ENST00000637424 HDXQ7Z353 690 aa8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 FAM76AQ8TAV0 307 aa8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 SNX21Q969T3 373 aa8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 SMARCA4P51532 1647 aa8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 TOP2AP11388 1531 aaKnown RBP8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 NKTRP30414 1462 aaKnown RBP8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 IGSF3O75054 1194 aa8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 FGFR1OPO95684 399 aaKnown RBP8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 PIP4K2BP78356 416 aa8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 AIMP1Q12904 312 aaKnown RBP8.65□□□□□ -1.03
CACNA1D-224ENST00000637424 BMP2KLQ5H9B9 411 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 VGLL3A8MV65 326 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 POTEJP0CG39 1038 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 DESP17661 470 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 GJB2P29033 226 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 DDX46Q7L014 1031 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 SKAP1Q86WV1 359 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 MYRIPQ8NFW9 859 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 ZHX3Q9H4I2 956 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 GOLIM4O00461 696 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 JADE2Q9NQC1 790 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 C20orf194Q5TEA3 1177 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 LMNTD2Q8IXW0 634 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 PPP1R12BO60237 982 aaPredicted RBP8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 KIF4AO95239 1232 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 CNNM3Q8NE01 707 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 KIF21BO75037 1637 aa8.64□□□□□ -1.03
CACNA1D-224ENST00000637424 NBPF8Q3BBV2 869 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 HMGB1P09429 215 aaKnown RBP8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 MAP2K2P36507 400 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 B4GALNT4Q76KP1 1039 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 FMNL3Q8IVF7 1028 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 ZSCAN22P10073 491 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 LACTBP83111 547 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 KLHL10Q6JEL2 608 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 GDPD2Q9HCC8 539 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 FSD2A1L4K1 749 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 RAB11FIP3O75154 756 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 NAP1L3Q99457 506 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 MTMR7Q9Y216 660 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 CCDC160A6NGH7 325 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 ANO6Q4KMQ2 910 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 PPFIBP2Q8ND30 876 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 AFAP1L1Q8TED9 768 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 GTF3C6Q969F1 213 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 TTC12Q9H892 705 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 LRRC9Q6ZRR7 1453 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 RAB3GAP1Q15042 981 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 ALDH1L2Q3SY69 923 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 TDRD12Q587J7 1177 aaKnown RBP8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 BANK1Q8NDB2 785 aa8.63□□□□□ -1.03
CACNA1D-224ENST00000637424 ZFYP08048 801 aaPredicted RBP8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 GIMAP6Q6P9H5 292 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 C8orf76Q96K31 380 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 NOL3O60936 208 aaKnown RBP8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 DNA2P51530 1060 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 LARP1Q6PKG0 1096 aaKnown RBP8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 HOOK3Q86VS8 718 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 U2AF2P26368 475 aaKnown RBP eCLIP8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 MATR3P43243 847 aaKnown RBP eCLIP8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 IFI16Q16666 785 aaKnown RBP8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 A6NNZ2 444 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 INPP5BP32019 993 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 TUBB8Q3ZCM7 444 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 CTAGE1Q96RT6 745 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 PRIM1P49642 420 aaKnown RBP8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 RARSP54136 660 aaKnown RBP8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 SMC5Q8IY18 1101 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 CNKSR2Q8WXI2 1034 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 SAMD15Q9P1V8 674 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 ERBINQ96RT1 1412 aa8.62□□□□□ -1.03
CACNA1D-224ENST00000637424 NUTM2FA1L443 756 aa8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 CTAGE9A4FU28 777 aa8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 UTP14CQ5TAP6 766 aaKnown RBP8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 TBC1D9Q6ZT07 1266 aa8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 PYM1Q9BRP8 204 aaKnown RBP8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 FYCO1Q9BQS8 1478 aa8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 GLRX3O76003 335 aaKnown RBP8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 KANK3Q6NY19 840 aa8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 NUTM1Q86Y26 1132 aa8.61□□□□□ -1.03
CACNA1D-224ENST00000637424 MIPOL1Q8TD10 442 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms