RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 PI4KAP1Q8N8J0 262 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 PRIMPOLQ96LW4 560 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 AK7Q96M32 723 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 INSRP06213 1382 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 SPDYE4A6NLX3 237 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 RAD21O60216 631 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 ATF3P18847 181 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.63■□□□□ 0.57
CLN5-218ENST00000637397 CTNNA3Q9UI47 895 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 ZHX1Q9UKY1 873 aaPredicted RBP18.63■□□□□ 0.57
CLN5-218ENST00000637397 CABP4P57796 275 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 PLCH2O75038 1416 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 CCDC57Q2TAC2 916 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 TRIM22Q8IYM9 498 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 SHANK2Q9UPX8 1470 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 ANXA1P04083 346 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 ANAPC15P60006 121 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 NOL10Q9BSC4 688 aaKnown RBP18.63■□□□□ 0.57
CLN5-218ENST00000637397 ZRANB1Q9UGI0 708 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 KIAA0556O60303 1618 aa18.63■□□□□ 0.57
CLN5-218ENST00000637397 SMTNL1A8MU46 457 aa18.62■□□□□ 0.57
CLN5-218ENST00000637397 MPRIPQ6WCQ1 1025 aa18.62■□□□□ 0.57
CLN5-218ENST00000637397 EVI5LQ96CN4 794 aa18.62■□□□□ 0.57
CLN5-218ENST00000637397 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
CLN5-218ENST00000637397 G3V3G9 751 aa18.62■□□□□ 0.57
CLN5-218ENST00000637397 SKIDA1Q1XH10 827 aa18.62■□□□□ 0.57
CLN5-218ENST00000637397 DCAF8Q5TAQ9 597 aa18.62■□□□□ 0.57
CLN5-218ENST00000637397 ERCC4Q92889 916 aaPredicted RBP18.62■□□□□ 0.57
CLN5-218ENST00000637397 TCEANC2Q96MN5 208 aa18.62■□□□□ 0.57
CLN5-218ENST00000637397 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
CLN5-218ENST00000637397 MAGI3Q5TCQ9 1506 aa18.62■□□□□ 0.57
CLN5-218ENST00000637397 THEMISQ8N1K5 641 aaPredicted RBP18.62■□□□□ 0.57
CLN5-218ENST00000637397 PPFIA3O75145 1194 aa18.61■□□□□ 0.57
CLN5-218ENST00000637397 U3KPZ7 1027 aaPredicted RBP18.61■□□□□ 0.57
CLN5-218ENST00000637397 OTUD7AQ8TE49 926 aaPredicted RBP18.61■□□□□ 0.57
CLN5-218ENST00000637397 CCT2P78371 535 aaKnown RBP18.61■□□□□ 0.57
CLN5-218ENST00000637397 RBSNQ9H1K0 784 aa18.61■□□□□ 0.57
CLN5-218ENST00000637397 DBF4Q9UBU7 674 aaPredicted RBP18.61■□□□□ 0.57
CLN5-218ENST00000637397 HS1BP3Q53T59 392 aa18.6■□□□□ 0.57
CLN5-218ENST00000637397 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
CLN5-218ENST00000637397 LEKR1Q6ZMV7 388 aa18.6■□□□□ 0.57
CLN5-218ENST00000637397 KIF2AO00139 706 aaPredicted RBP18.6■□□□□ 0.57
CLN5-218ENST00000637397 TMX4Q9H1E5 349 aaPredicted RBP18.6■□□□□ 0.57
CLN5-218ENST00000637397 ADGRL2O95490 1459 aa18.6■□□□□ 0.57
CLN5-218ENST00000637397 NUP133Q8WUM0 1156 aa18.6■□□□□ 0.57
CLN5-218ENST00000637397 DACH1Q9UI36 760 aa18.6■□□□□ 0.57
CLN5-218ENST00000637397 DNM1Q05193 864 aaKnown RBP18.59■□□□□ 0.57
CLN5-218ENST00000637397 MYD88Q99836 296 aa18.59■□□□□ 0.57
CLN5-218ENST00000637397 TRIM35Q9UPQ4 493 aa18.59■□□□□ 0.57
CLN5-218ENST00000637397 CCDC69A6NI79 296 aa18.59■□□□□ 0.57
CLN5-218ENST00000637397 IMMTQ16891 758 aaKnown RBP18.59■□□□□ 0.57
CLN5-218ENST00000637397 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
CLN5-218ENST00000637397 FSIP1Q8NA03 581 aa18.59■□□□□ 0.57
CLN5-218ENST00000637397 CDKL5O76039 1030 aa18.58■□□□□ 0.57
CLN5-218ENST00000637397 ATP8B2P98198 1209 aa18.58■□□□□ 0.57
CLN5-218ENST00000637397 TMCO3Q6UWJ1 677 aa18.58■□□□□ 0.57
CLN5-218ENST00000637397 KIF6Q6ZMV9 814 aa18.58■□□□□ 0.57
CLN5-218ENST00000637397 A0A1W2PP64 1363 aa18.58■□□□□ 0.56
CLN5-218ENST00000637397 URI1O94763 535 aaPredicted RBP18.58■□□□□ 0.56
CLN5-218ENST00000637397 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.56
CLN5-218ENST00000637397 CTAGE5O15320 804 aa18.58■□□□□ 0.56
CLN5-218ENST00000637397 C8orf76Q96K31 380 aa18.58■□□□□ 0.56
CLN5-218ENST00000637397 CCDC186Q7Z3E2 898 aa18.57■□□□□ 0.56
CLN5-218ENST00000637397 ACEP12821 1306 aa18.57■□□□□ 0.56
CLN5-218ENST00000637397 MAP3K2Q9Y2U5 619 aa18.57■□□□□ 0.56
CLN5-218ENST00000637397 KDM6BO15054 1643 aa18.57■□□□□ 0.56
CLN5-218ENST00000637397 BIN1O00499 593 aa18.57■□□□□ 0.56
CLN5-218ENST00000637397 AXDND1Q5T1B0 1012 aaPredicted RBP18.57■□□□□ 0.56
CLN5-218ENST00000637397 F13A1P00488 732 aa18.57■□□□□ 0.56
CLN5-218ENST00000637397 PUS7Q96PZ0 661 aaKnown RBP18.57■□□□□ 0.56
CLN5-218ENST00000637397 CGNQ9P2M7 1197 aaKnown RBP18.56■□□□□ 0.56
CLN5-218ENST00000637397 PIK3R4Q99570 1358 aa18.56■□□□□ 0.56
CLN5-218ENST00000637397 TXLNAP40222 546 aa18.56■□□□□ 0.56
CLN5-218ENST00000637397 IDH1O75874 414 aaKnown RBP18.56■□□□□ 0.56
CLN5-218ENST00000637397 EIF4A2Q14240 407 aaKnown RBP18.56■□□□□ 0.56
CLN5-218ENST00000637397 FAM200AQ8TCP9 573 aa18.56■□□□□ 0.56
CLN5-218ENST00000637397 DACT1Q9NYF0 836 aa18.56■□□□□ 0.56
CLN5-218ENST00000637397 PROSER2Q86WR7 435 aaPredicted RBP18.55■□□□□ 0.56
CLN5-218ENST00000637397 GCC2Q8IWJ2 1684 aa18.55■□□□□ 0.56
CLN5-218ENST00000637397 NACAP1Q9BZK3 213 aa18.55■□□□□ 0.56
CLN5-218ENST00000637397 MAGEC2Q9UBF1 373 aaPredicted RBP18.55■□□□□ 0.56
CLN5-218ENST00000637397 IFIT1P09914 478 aaKnown RBP18.55■□□□□ 0.56
CLN5-218ENST00000637397 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
CLN5-218ENST00000637397 ERLIN1O75477 346 aa18.55■□□□□ 0.56
CLN5-218ENST00000637397 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
CLN5-218ENST00000637397 ANO6Q4KMQ2 910 aa18.55■□□□□ 0.56
CLN5-218ENST00000637397 NEMFO60524 1076 aa18.54■□□□□ 0.56
CLN5-218ENST00000637397 NEK1Q96PY6 1258 aa18.54■□□□□ 0.56
CLN5-218ENST00000637397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.54■□□□□ 0.56
CLN5-218ENST00000637397 ZSCAN25Q6NSZ9 544 aa18.54■□□□□ 0.56
CLN5-218ENST00000637397 CHMLP26374 656 aa18.54■□□□□ 0.56
CLN5-218ENST00000637397 AK2P54819 239 aa18.54■□□□□ 0.56
CLN5-218ENST00000637397 STX1AQ16623 288 aa18.54■□□□□ 0.56
CLN5-218ENST00000637397 CCAR1Q8IX12 1150 aaKnown RBP18.54■□□□□ 0.56
CLN5-218ENST00000637397 INTS4Q96HW7 963 aaKnown RBP18.54■□□□□ 0.56
CLN5-218ENST00000637397 NOL7Q9UMY1 257 aaKnown RBP18.54■□□□□ 0.56
CLN5-218ENST00000637397 RBM8AQ9Y5S9 174 aaKnown RBP18.54■□□□□ 0.56
CLN5-218ENST00000637397 ADAMTS12P58397 1594 aa18.53■□□□□ 0.56
CLN5-218ENST00000637397 PATL2C9JE40 543 aaKnown RBP18.53■□□□□ 0.56
CLN5-218ENST00000637397 H0YHG0 523 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms