RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 PROSER3Q2NL68 480 aa26.79■■□□□ 1.88
CLN8-213ENST00000637156 DDX19BQ9UMR2 479 aa26.78■■□□□ 1.88
CLN8-213ENST00000637156 KCPQ6ZWJ8 1503 aa26.77■■□□□ 1.88
CLN8-213ENST00000637156 F6X3S4 739 aa26.77■■□□□ 1.88
CLN8-213ENST00000637156 FKBP5Q13451 457 aaPredicted RBP26.77■■□□□ 1.88
CLN8-213ENST00000637156 SEPT12Q8IYM1 358 aa26.76■■□□□ 1.88
CLN8-213ENST00000637156 DDX21Q9NR30 783 aaKnown RBP eCLIP26.76■■□□□ 1.88
CLN8-213ENST00000637156 KCNQ2O43526 872 aa26.76■■□□□ 1.87
CLN8-213ENST00000637156 INTS3Q68E01 1043 aaKnown RBP26.76■■□□□ 1.87
CLN8-213ENST00000637156 ZBTB7BO15156 539 aaPredicted RBP26.75■■□□□ 1.87
CLN8-213ENST00000637156 THSD7AQ9UPZ6 1657 aa26.75■■□□□ 1.87
CLN8-213ENST00000637156 ITGB4P16144 1822 aa26.75■■□□□ 1.87
CLN8-213ENST00000637156 AAMPQ13685 434 aa26.74■■□□□ 1.87
CLN8-213ENST00000637156 FAM182BQ5T319 152 aa26.74■■□□□ 1.87
CLN8-213ENST00000637156 KAT6BQ8WYB5 2073 aa26.74■■□□□ 1.87
CLN8-213ENST00000637156 HYPKQ9NX55 129 aa26.73■■□□□ 1.87
CLN8-213ENST00000637156 PAPPAQ13219 1627 aa26.73■■□□□ 1.87
CLN8-213ENST00000637156 ZNF772Q68DY9 489 aaPredicted RBP26.72■■□□□ 1.87
CLN8-213ENST00000637156 VSIG10Q8N0Z9 540 aa26.72■■□□□ 1.87
CLN8-213ENST00000637156 SLC4A9Q96Q91 983 aa26.72■■□□□ 1.87
CLN8-213ENST00000637156 ZBTB40Q9NUA8 1239 aa26.72■■□□□ 1.87
CLN8-213ENST00000637156 UBR2Q8IWV8 1755 aa26.72■■□□□ 1.87
CLN8-213ENST00000637156 RBM42Q9BTD8 480 aaKnown RBP26.72■■□□□ 1.87
CLN8-213ENST00000637156 SLC4A10Q6U841 1118 aa26.71■■□□□ 1.87
CLN8-213ENST00000637156 LRP10Q7Z4F1 713 aa26.71■■□□□ 1.87
CLN8-213ENST00000637156 PCDHB15Q9Y5E8 787 aa26.71■■□□□ 1.87
CLN8-213ENST00000637156 C5P01031 1676 aa26.71■■□□□ 1.87
CLN8-213ENST00000637156 MYL6BP14649 208 aa26.7■■□□□ 1.87
CLN8-213ENST00000637156 PIP4K2AP48426 406 aaPredicted RBP26.7■■□□□ 1.87
CLN8-213ENST00000637156 CACNA1FO60840 1977 aa26.7■■□□□ 1.86
CLN8-213ENST00000637156 DOT1LQ8TEK3 1739 aa26.69■■□□□ 1.86
CLN8-213ENST00000637156 PELP1Q8IZL8 1130 aaKnown RBP26.69■■□□□ 1.86
CLN8-213ENST00000637156 PI4KAP2A4QPH2 592 aa26.68■■□□□ 1.86
CLN8-213ENST00000637156 NBPF26B4DH59 902 aa26.68■■□□□ 1.86
CLN8-213ENST00000637156 A1BGP04217 495 aa26.68■■□□□ 1.86
CLN8-213ENST00000637156 NBPF14Q5TI25 921 aa26.68■■□□□ 1.86
CLN8-213ENST00000637156 NBPF10Q6P3W6 841 aaKnown RBP26.68■■□□□ 1.86
CLN8-213ENST00000637156 PTF1AQ7RTS3 328 aa26.68■■□□□ 1.86
CLN8-213ENST00000637156 NBPF15Q8N660 670 aa26.68■■□□□ 1.86
CLN8-213ENST00000637156 PI4KAP1Q8N8J0 262 aa26.68■■□□□ 1.86
CLN8-213ENST00000637156 DNAJC10Q8IXB1 793 aa26.68■■□□□ 1.86
CLN8-213ENST00000637156 TEX13AQ9BXU3 409 aaPredicted RBP26.67■■□□□ 1.86
CLN8-213ENST00000637156 AIMP1Q12904 312 aaKnown RBP26.66■■□□□ 1.86
CLN8-213ENST00000637156 CCT4P50991 539 aaKnown RBP26.66■■□□□ 1.86
CLN8-213ENST00000637156 RBM6P78332 1123 aaKnown RBP26.66■■□□□ 1.86
CLN8-213ENST00000637156 COPS6Q7L5N1 327 aa26.66■■□□□ 1.86
CLN8-213ENST00000637156 ERBB4Q15303 1308 aa26.64■■□□□ 1.86
CLN8-213ENST00000637156 IGHDP01880 384 aa26.64■■□□□ 1.86
CLN8-213ENST00000637156 KSR2Q6VAB6 950 aa26.64■■□□□ 1.86
CLN8-213ENST00000637156 XAGE3Q8WTP9 111 aa26.64■■□□□ 1.86
CLN8-213ENST00000637156 ADCY9O60503 1353 aa26.64■■□□□ 1.86
CLN8-213ENST00000637156 DNAAF4Q8WXU2 420 aa26.64■■□□□ 1.85
CLN8-213ENST00000637156 CHMP4BQ9H444 224 aaKnown RBP26.64■■□□□ 1.85
CLN8-213ENST00000637156 RGS17Q9UGC6 210 aaPredicted RBP26.63■■□□□ 1.85
CLN8-213ENST00000637156 MAP3K2Q9Y2U5 619 aa26.62■■□□□ 1.85
CLN8-213ENST00000637156 STARD3NLO95772 234 aa26.62■■□□□ 1.85
CLN8-213ENST00000637156 KDM2BQ8NHM5 1336 aa26.61■■□□□ 1.85
CLN8-213ENST00000637156 CYP19A1P11511 503 aaPredicted RBP26.61■■□□□ 1.85
CLN8-213ENST00000637156 BEND3Q5T5X7 828 aa26.61■■□□□ 1.85
CLN8-213ENST00000637156 LOC102724428A0A0B4J2F2 783 aa26.6■■□□□ 1.85
CLN8-213ENST00000637156 SIK1P57059 783 aa26.6■■□□□ 1.85
CLN8-213ENST00000637156 SMARCC1Q92922 1105 aaPredicted RBP26.6■■□□□ 1.85
CLN8-213ENST00000637156 DDX58O95786 925 aaKnown RBP26.59■■□□□ 1.85
CLN8-213ENST00000637156 ANKRD13DQ6ZTN6 518 aa26.59■■□□□ 1.85
CLN8-213ENST00000637156 MEIS3Q99687 375 aa26.59■■□□□ 1.85
CLN8-213ENST00000637156 PALLDQ8WX93 1383 aa26.59■■□□□ 1.85
CLN8-213ENST00000637156 KRT27Q7Z3Y8 459 aa26.59■■□□□ 1.85
CLN8-213ENST00000637156 C1orf115Q9H7X2 142 aa26.59■■□□□ 1.85
CLN8-213ENST00000637156 EP400Q96L91 3159 aa26.58■■□□□ 1.85
CLN8-213ENST00000637156 ATP6V1AP38606 617 aa26.58■■□□□ 1.85
CLN8-213ENST00000637156 SRCIN1Q9C0H9 1055 aa26.57■■□□□ 1.84
CLN8-213ENST00000637156 RIC3Q7Z5B4 369 aa26.57■■□□□ 1.84
CLN8-213ENST00000637156 LAMB4A4D0S4 1761 aa26.56■■□□□ 1.84
CLN8-213ENST00000637156 RXRBP28702 533 aa26.56■■□□□ 1.84
CLN8-213ENST00000637156 CENPQQ7L2Z9 268 aaPredicted RBP26.56■■□□□ 1.84
CLN8-213ENST00000637156 USP44Q9H0E7 712 aa26.56■■□□□ 1.84
CLN8-213ENST00000637156 PXDNLA1KZ92 1463 aa26.55■■□□□ 1.84
CLN8-213ENST00000637156 ITPK1Q13572 414 aa26.55■■□□□ 1.84
CLN8-213ENST00000637156 TTLL7Q6ZT98 887 aa26.55■■□□□ 1.84
CLN8-213ENST00000637156 RWDD1Q9H446 243 aaPredicted RBP26.54■■□□□ 1.84
CLN8-213ENST00000637156 FAM196AQ6ZSG2 479 aa26.53■■□□□ 1.84
CLN8-213ENST00000637156 ATP10DQ9P241 1426 aa26.53■■□□□ 1.84
CLN8-213ENST00000637156 SIRT2Q8IXJ6 389 aa26.53■■□□□ 1.84
CLN8-213ENST00000637156 PLBD2Q8NHP8 589 aa26.53■■□□□ 1.84
CLN8-213ENST00000637156 HDAC1Q13547 482 aaPredicted RBP26.52■■□□□ 1.84
CLN8-213ENST00000637156 POTEAQ6S8J7 498 aa26.52■■□□□ 1.84
CLN8-213ENST00000637156 METTL22Q9BUU2 404 aaPredicted RBP26.52■■□□□ 1.84
CLN8-213ENST00000637156 ZBTB1Q9Y2K1 713 aa26.52■■□□□ 1.84
CLN8-213ENST00000637156 CWF19L2Q2TBE0 894 aaKnown RBP26.51■■□□□ 1.83
CLN8-213ENST00000637156 BCL11BQ9C0K0 894 aaPredicted RBP26.51■■□□□ 1.83
CLN8-213ENST00000637156 IGKV5-2P06315 115 aa26.51■■□□□ 1.83
CLN8-213ENST00000637156 INTS5Q6P9B9 1019 aaKnown RBP26.51■■□□□ 1.83
CLN8-213ENST00000637156 LINS1Q8NG48 757 aa26.51■■□□□ 1.83
CLN8-213ENST00000637156 ALDH1L1O75891 902 aa26.5■■□□□ 1.83
CLN8-213ENST00000637156 GNAI3P08754 354 aa26.49■■□□□ 1.83
CLN8-213ENST00000637156 KCNQ4P56696 695 aa26.49■■□□□ 1.83
CLN8-213ENST00000637156 ZNF330Q9Y3S2 320 aaPredicted RBP26.49■■□□□ 1.83
CLN8-213ENST00000637156 NBPF7P0C2Y1 421 aaPredicted RBP26.48■■□□□ 1.83
CLN8-213ENST00000637156 CRKLP46109 303 aaKnown RBP26.48■■□□□ 1.83
CLN8-213ENST00000637156 MYD88Q99836 296 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms