RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 RTCBQ9Y3I0 505 aaKnown RBP10.26□□□□□ -0.77
GABRA1-216ENST00000637044 C22orf23Q9BZE7 217 aa10.26□□□□□ -0.77
GABRA1-216ENST00000637044 LRRCC1Q9C099 1032 aa10.26□□□□□ -0.77
GABRA1-216ENST00000637044 SPATA31A1Q5TZJ5 1347 aa10.26□□□□□ -0.77
GABRA1-216ENST00000637044 C8orf58Q8NAV2 365 aa10.25□□□□□ -0.77
GABRA1-216ENST00000637044 A0A087WZG4 1122 aa10.25□□□□□ -0.77
GABRA1-216ENST00000637044 PIP4K2AP48426 406 aaPredicted RBP10.25□□□□□ -0.77
GABRA1-216ENST00000637044 KRT24Q2M2I5 525 aa10.25□□□□□ -0.77
GABRA1-216ENST00000637044 MRPL50Q8N5N7 158 aaKnown RBP10.25□□□□□ -0.77
GABRA1-216ENST00000637044 CYP27B1O15528 508 aa10.25□□□□□ -0.77
GABRA1-216ENST00000637044 FRAT2O75474 233 aaPredicted RBP10.25□□□□□ -0.77
GABRA1-216ENST00000637044 ZNF496Q96IT1 587 aaPredicted RBP10.25□□□□□ -0.77
GABRA1-216ENST00000637044 STK32BQ9NY57 414 aa10.25□□□□□ -0.77
GABRA1-216ENST00000637044 CHD2O14647 1828 aaKnown RBP10.24□□□□□ -0.77
GABRA1-216ENST00000637044 SSH2Q76I76 1423 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 HSP90AB3PQ58FF7 597 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 SPATA31A5Q5VU36 1347 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 SPATA31A7Q8IWB4 1347 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 GNPATO15228 680 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 ZNF521Q96K83 1311 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 CHL1O00533 1208 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 DNAJC10Q8IXB1 793 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 CHPF2Q9P2E5 772 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 NAP1L2Q9ULW6 460 aaPredicted RBP10.24□□□□□ -0.77
GABRA1-216ENST00000637044 CD163L1Q9NR16 1453 aa10.24□□□□□ -0.77
GABRA1-216ENST00000637044 ITSN1Q15811 1721 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 XRN1Q8IZH2 1706 aaKnown RBP10.23□□□□□ -0.77
GABRA1-216ENST00000637044 GPTP24298 496 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 PLEKHF1Q96S99 279 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 MYD88Q99836 296 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 SRGAP3O43295 1099 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 HDAC1Q13547 482 aaPredicted RBP10.23□□□□□ -0.77
GABRA1-216ENST00000637044 COPS6Q7L5N1 327 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 ANKRD13DQ6ZTN6 518 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 CNTROBQ8N137 903 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 ASAP1Q9ULH1 1129 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 TBC1D2BQ9UPU7 963 aa10.23□□□□□ -0.77
GABRA1-216ENST00000637044 DCAF8L1A6NGE4 600 aa10.22□□□□□ -0.77
GABRA1-216ENST00000637044 ANO2Q9NQ90 1003 aa10.22□□□□□ -0.77
GABRA1-216ENST00000637044 F6X3S4 739 aa10.22□□□□□ -0.77
GABRA1-216ENST00000637044 PI4KAP2A4QPH2 592 aa10.22□□□□□ -0.77
GABRA1-216ENST00000637044 ZKSCAN1P17029 563 aaPredicted RBP10.22□□□□□ -0.77
GABRA1-216ENST00000637044 BARGINQ6ZT62 677 aa10.22□□□□□ -0.77
GABRA1-216ENST00000637044 TRMT2AQ8IZ69 625 aaKnown RBP10.22□□□□□ -0.77
GABRA1-216ENST00000637044 TSPYL6Q8N831 410 aa10.22□□□□□ -0.77
GABRA1-216ENST00000637044 PI4KAP1Q8N8J0 262 aa10.22□□□□□ -0.77
GABRA1-216ENST00000637044 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
GABRA1-216ENST00000637044 KNDC1Q76NI1 1749 aa10.21□□□□□ -0.77
GABRA1-216ENST00000637044 ADGRB2O60241 1585 aa10.21□□□□□ -0.77
GABRA1-216ENST00000637044 LOC102724428A0A0B4J2F2 783 aa10.21□□□□□ -0.77
GABRA1-216ENST00000637044 SIK1P57059 783 aa10.21□□□□□ -0.77
GABRA1-216ENST00000637044 TRAPPC3LQ5T215 181 aa10.21□□□□□ -0.77
GABRA1-216ENST00000637044 DZIP3Q86Y13 1208 aaKnown RBP10.21□□□□□ -0.77
GABRA1-216ENST00000637044 TRMT112Q9UI30 125 aaKnown RBP10.21□□□□□ -0.77
GABRA1-216ENST00000637044 NWD1Q149M9 1564 aa10.21□□□□□ -0.78
GABRA1-216ENST00000637044 ATP5J2-PTCD1G3V325 749 aa10.21□□□□□ -0.78
GABRA1-216ENST00000637044 KCNQ3O43525 872 aa10.21□□□□□ -0.78
GABRA1-216ENST00000637044 RAB11FIP3O75154 756 aa10.21□□□□□ -0.78
GABRA1-216ENST00000637044 A1BGP04217 495 aa10.21□□□□□ -0.78
GABRA1-216ENST00000637044 HOXB7P09629 217 aa10.21□□□□□ -0.78
GABRA1-216ENST00000637044 HIP1O00291 1037 aa10.2□□□□□ -0.78
GABRA1-216ENST00000637044 RNF20Q5VTR2 975 aa10.2□□□□□ -0.78
GABRA1-216ENST00000637044 FNBP4Q8N3X1 1017 aaPredicted RBP10.2□□□□□ -0.78
GABRA1-216ENST00000637044 PIGBQ92521 554 aa10.2□□□□□ -0.78
GABRA1-216ENST00000637044 MAP3K2Q9Y2U5 619 aa10.2□□□□□ -0.78
GABRA1-216ENST00000637044 EIF4A1P60842 406 aaKnown RBP10.2□□□□□ -0.78
GABRA1-216ENST00000637044 CHMP4CQ96CF2 233 aa10.2□□□□□ -0.78
GABRA1-216ENST00000637044 KIF1BPQ96EK5 621 aa10.2□□□□□ -0.78
GABRA1-216ENST00000637044 DDX21Q9NR30 783 aaKnown RBP eCLIP10.2□□□□□ -0.78
GABRA1-216ENST00000637044 CCDC87Q9NVE4 849 aa10.2□□□□□ -0.78
GABRA1-216ENST00000637044 PCDHB15Q9Y5E8 787 aa10.2□□□□□ -0.78
GABRA1-216ENST00000637044 RLBP1P12271 317 aa10.19□□□□□ -0.78
GABRA1-216ENST00000637044 OVOS2A0A0G2JMS6 1433 aa10.19□□□□□ -0.78
GABRA1-216ENST00000637044 IGHDP01880 384 aa10.19□□□□□ -0.78
GABRA1-216ENST00000637044 NEUROD6Q96NK8 337 aa10.19□□□□□ -0.78
GABRA1-216ENST00000637044 CCDC85AQ96PX6 553 aaPredicted RBP10.19□□□□□ -0.78
GABRA1-216ENST00000637044 SETDB2Q96T68 719 aa10.19□□□□□ -0.78
GABRA1-216ENST00000637044 FMN2Q9NZ56 1722 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 NBPF5PQ86XG9 351 aaPredicted RBP10.18□□□□□ -0.78
GABRA1-216ENST00000637044 VPS37DQ86XT2 251 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 EXOC6BQ9Y2D4 811 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 GOLGA6L4A6NEF3 574 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 CCDC57Q2TAC2 916 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 PPP1R42Q7Z4L9 355 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 ILDR1Q86SU0 546 aaPredicted RBP10.18□□□□□ -0.78
GABRA1-216ENST00000637044 MARCH10Q8NA82 808 aaPredicted RBP10.18□□□□□ -0.78
GABRA1-216ENST00000637044 KIF3AQ9Y496 699 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 USP16Q9Y5T5 823 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 KCNQ2O43526 872 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 GIGYF1O75420 1035 aaPredicted RBP10.18□□□□□ -0.78
GABRA1-216ENST00000637044 SLC4A3P48751 1232 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 KCNQ4P56696 695 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 MPHOSPH8Q99549 860 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 NIP7Q9Y221 180 aaKnown RBP eCLIP10.18□□□□□ -0.78
GABRA1-216ENST00000637044 LRRFIP2Q9Y608 721 aaKnown RBP10.18□□□□□ -0.78
GABRA1-216ENST00000637044 ALDH1L1O75891 902 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 ANKRD44Q8N8A2 993 aa10.18□□□□□ -0.78
GABRA1-216ENST00000637044 ZBTB40Q9NUA8 1239 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms