RNA–Protein interactions for RNA: ENST00000637007.1

CACNB4-240, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 858 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-240	ENST00000637007	ALDH1L2	Q3SY69	923 aa		10.84	□□□□□ -0.67
CACNB4-240	ENST00000637007	SMC4	Q9NTJ3	1288 aa		10.84	□□□□□ -0.67
CACNB4-240	ENST00000637007	MIS18A	Q9NYP9	233 aa		10.84	□□□□□ -0.67
CACNB4-240	ENST00000637007	UBR2	Q8IWV8	1755 aa		10.84	□□□□□ -0.67
CACNB4-240	ENST00000637007	TTC5	Q8N0Z6	440 aa		10.83	□□□□□ -0.68
CACNB4-240	ENST00000637007	CHMP4A	Q9BY43	222 aa		10.83	□□□□□ -0.68
CACNB4-240	ENST00000637007	GTF3C3	Q9Y5Q9	886 aa		10.83	□□□□□ -0.68
CACNB4-240	ENST00000637007	KIF16B	Q96L93	1317 aa		10.83	□□□□□ -0.68
CACNB4-240	ENST00000637007	C5	P01031	1676 aa		10.82	□□□□□ -0.68
CACNB4-240	ENST00000637007	ZNF772	Q68DY9	489 aa	Predicted RBP	10.82	□□□□□ -0.68
CACNB4-240	ENST00000637007	C8orf58	Q8NAV2	365 aa		10.82	□□□□□ -0.68
CACNB4-240	ENST00000637007	GJD4	Q96KN9	370 aa	Predicted RBP	10.82	□□□□□ -0.68
CACNB4-240	ENST00000637007	ELL2	O00472	640 aa	Predicted RBP	10.81	□□□□□ -0.68
CACNB4-240	ENST00000637007	VAMP4	O75379	141 aa		10.81	□□□□□ -0.68
CACNB4-240	ENST00000637007	HOXB7	P09629	217 aa		10.81	□□□□□ -0.68
CACNB4-240	ENST00000637007	FKBP8	Q14318	412 aa		10.81	□□□□□ -0.68
CACNB4-240	ENST00000637007	NFATC2IP	Q8NCF5	419 aa		10.81	□□□□□ -0.68
CACNB4-240	ENST00000637007	SSH1	Q8WYL5	1049 aa		10.81	□□□□□ -0.68
CACNB4-240	ENST00000637007	TMOD3	Q9NYL9	352 aa		10.81	□□□□□ -0.68
CACNB4-240	ENST00000637007	BRWD3	Q6RI45	1802 aa		10.8	□□□□□ -0.68
CACNB4-240	ENST00000637007	POTEF	A5A3E0	1075 aa		10.8	□□□□□ -0.68
CACNB4-240	ENST00000637007	BCAR3	O75815	825 aa		10.8	□□□□□ -0.68
CACNB4-240	ENST00000637007	MS4A1	P11836	297 aa		10.8	□□□□□ -0.68
CACNB4-240	ENST00000637007	EIF4A1	P60842	406 aa	Known RBP	10.8	□□□□□ -0.68
CACNB4-240	ENST00000637007	TSPYL6	Q8N831	410 aa		10.8	□□□□□ -0.68
CACNB4-240	ENST00000637007	BCL2L13	Q9BXK5	485 aa		10.8	□□□□□ -0.68
CACNB4-240	ENST00000637007	STK31	Q9BXU1	1019 aa		10.8	□□□□□ -0.68
CACNB4-240	ENST00000637007	QTRT2	Q9H974	415 aa	Known RBP	10.8	□□□□□ -0.68
CACNB4-240	ENST00000637007	NHS	Q6T4R5	1651 aa		10.79	□□□□□ -0.68
CACNB4-240	ENST00000637007	IPO8	O15397	1037 aa	Known RBP	10.79	□□□□□ -0.68
CACNB4-240	ENST00000637007	KRT24	Q2M2I5	525 aa		10.79	□□□□□ -0.68
CACNB4-240	ENST00000637007	CCDC30	Q5VVM6	783 aa		10.79	□□□□□ -0.68
CACNB4-240	ENST00000637007	ERICH6B	Q5W0A0	696 aa		10.79	□□□□□ -0.68
CACNB4-240	ENST00000637007	ZNF790	Q6PG37	636 aa		10.79	□□□□□ -0.68
CACNB4-240	ENST00000637007	FRAT1	Q92837	279 aa	Predicted RBP	10.79	□□□□□ -0.68
CACNB4-240	ENST00000637007	FMNL2	Q96PY5	1086 aa		10.79	□□□□□ -0.68
CACNB4-240	ENST00000637007	SBF2	Q86WG5	1849 aa		10.79	□□□□□ -0.68
CACNB4-240	ENST00000637007	KCNQ3	O43525	872 aa		10.78	□□□□□ -0.68
CACNB4-240	ENST00000637007	PLIN1	O60240	522 aa		10.78	□□□□□ -0.68
CACNB4-240	ENST00000637007	BRPF1	P55201	1214 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNB4-240	ENST00000637007	IRX6	P78412	446 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNB4-240	ENST00000637007	ZKSCAN2	Q63HK3	967 aa		10.78	□□□□□ -0.68
CACNB4-240	ENST00000637007	MARCH10	Q8NA82	808 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNB4-240	ENST00000637007	KCP	Q6ZWJ8	1503 aa		10.78	□□□□□ -0.68
CACNB4-240	ENST00000637007	BTAF1	O14981	1849 aa		10.77	□□□□□ -0.68
CACNB4-240	ENST00000637007	BCL9	O00512	1426 aa		10.77	□□□□□ -0.68
CACNB4-240	ENST00000637007	RBM6	P78332	1123 aa	Known RBP	10.77	□□□□□ -0.69
CACNB4-240	ENST00000637007	SLC39A6	Q13433	755 aa		10.77	□□□□□ -0.69
CACNB4-240	ENST00000637007	HDGFL1	Q5TGJ6	251 aa		10.77	□□□□□ -0.69
CACNB4-240	ENST00000637007	FTSJ3	Q8IY81	847 aa	Known RBP	10.77	□□□□□ -0.69
CACNB4-240	ENST00000637007	MRPL50	Q8N5N7	158 aa	Known RBP	10.77	□□□□□ -0.69
CACNB4-240	ENST00000637007	SYTL4	Q96C24	671 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNB4-240	ENST00000637007	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNB4-240	ENST00000637007	HEG1	Q9ULI3	1381 aa		10.77	□□□□□ -0.69
CACNB4-240	ENST00000637007	TCERG1	O14776	1098 aa	Known RBP	10.76	□□□□□ -0.69
CACNB4-240	ENST00000637007	PDE3A	Q14432	1141 aa		10.76	□□□□□ -0.69
CACNB4-240	ENST00000637007	SEPT12	Q8IYM1	358 aa		10.76	□□□□□ -0.69
CACNB4-240	ENST00000637007	API5	Q9BZZ5	524 aa	Known RBP	10.76	□□□□□ -0.69
CACNB4-240	ENST00000637007	ONECUT3	O60422	494 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	GIGYF1	O75420	1035 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	SNRPA1	P09661	255 aa	Known RBP	10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	EIF2S2	P20042	333 aa	Known RBP	10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	ATF7IP	Q6VMQ6	1270 aa		10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	DZIP1L	Q8IYY4	767 aa	Known RBP	10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	PIGB	Q92521	554 aa		10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	ARHGAP45	Q92619	1136 aa		10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	ZNF496	Q96IT1	587 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	NOB1	Q9ULX3	412 aa	Known RBP	10.75	□□□□□ -0.69
CACNB4-240	ENST00000637007	CIC	Q96RK0	1608 aa	Predicted RBP	10.74	□□□□□ -0.69
CACNB4-240	ENST00000637007	PRIM1	P49642	420 aa	Known RBP	10.74	□□□□□ -0.69
CACNB4-240	ENST00000637007	MMRN1	Q13201	1228 aa		10.74	□□□□□ -0.69
CACNB4-240	ENST00000637007	NECTIN2	Q92692	538 aa		10.74	□□□□□ -0.69
CACNB4-240	ENST00000637007	ACSBG1	Q96GR2	724 aa		10.74	□□□□□ -0.69
CACNB4-240	ENST00000637007	TJP1	Q07157	1748 aa		10.74	□□□□□ -0.69
CACNB4-240	ENST00000637007	PTPRC	P08575	1304 aa		10.74	□□□□□ -0.69
CACNB4-240	ENST00000637007	ZNF831	Q5JPB2	1677 aa		10.73	□□□□□ -0.69
CACNB4-240	ENST00000637007	SMARCC1	Q92922	1105 aa	Predicted RBP	10.73	□□□□□ -0.69
CACNB4-240	ENST00000637007	CRBN	Q96SW2	442 aa		10.73	□□□□□ -0.69
CACNB4-240	ENST00000637007	ERBB4	Q15303	1308 aa		10.73	□□□□□ -0.69
CACNB4-240	ENST00000637007	PTCD1	O75127	700 aa	Known RBP	10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	TRIM27	P14373	513 aa		10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	RXRB	P28702	533 aa		10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	C20orf194	Q5TEA3	1177 aa		10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	VSIG10	Q8N0Z9	540 aa		10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	PANK1	Q8TE04	598 aa		10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	ATG3	Q9NT62	314 aa		10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	CHPF2	Q9P2E5	772 aa		10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	DBF4	Q9UBU7	674 aa	Predicted RBP	10.72	□□□□□ -0.69
CACNB4-240	ENST00000637007	PXDNL	A1KZ92	1463 aa		10.71	□□□□□ -0.69
CACNB4-240	ENST00000637007	LY75	O60449	1722 aa		10.71	□□□□□ -0.69
CACNB4-240	ENST00000637007	FLII	Q13045	1269 aa		10.71	□□□□□ -0.69
CACNB4-240	ENST00000637007	KRT27	Q7Z3Y8	459 aa		10.71	□□□□□ -0.69
CACNB4-240	ENST00000637007	EXOC6	Q8TAG9	804 aa		10.71	□□□□□ -0.69
CACNB4-240	ENST00000637007	PALLD	Q8WX93	1383 aa		10.71	□□□□□ -0.69
CACNB4-240	ENST00000637007	CLUAP1	Q96AJ1	413 aa		10.71	□□□□□ -0.69
CACNB4-240	ENST00000637007	CHMP4B	Q9H444	224 aa	Known RBP	10.71	□□□□□ -0.69
CACNB4-240	ENST00000637007	HYPK	Q9NX55	129 aa		10.71	□□□□□ -0.69
CACNB4-240	ENST00000637007	PPP4R2	Q9NY27	417 aa		10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms