RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 TRIM6-TRIM34B2RNG4 842 aa18.7■□□□□ 0.58
CACNA1A-235ENST00000637004 KCNA6P17658 529 aa18.7■□□□□ 0.58
CACNA1A-235ENST00000637004 RILPL2Q969X0 211 aa18.69■□□□□ 0.58
CACNA1A-235ENST00000637004 CNPY2Q9Y2B0 182 aa18.69■□□□□ 0.58
CACNA1A-235ENST00000637004 ZSCAN22P10073 491 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-235ENST00000637004 WAPLQ7Z5K2 1190 aa18.69■□□□□ 0.58
CACNA1A-235ENST00000637004 AMOTL2Q9Y2J4 779 aa18.69■□□□□ 0.58
CACNA1A-235ENST00000637004 GNAI2P04899 355 aa18.69■□□□□ 0.58
CACNA1A-235ENST00000637004 DLG5Q8TDM6 1919 aa18.68■□□□□ 0.58
CACNA1A-235ENST00000637004 SLC4A2P04920 1241 aa18.68■□□□□ 0.58
CACNA1A-235ENST00000637004 PLCB2Q00722 1185 aa18.68■□□□□ 0.58
CACNA1A-235ENST00000637004 ANKRD7Q92527 254 aa18.68■□□□□ 0.58
CACNA1A-235ENST00000637004 PLEKHG1Q9ULL1 1385 aa18.68■□□□□ 0.58
CACNA1A-235ENST00000637004 EDC4Q6P2E9 1401 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-235ENST00000637004 ADAMTS13Q76LX8 1427 aa18.68■□□□□ 0.58
CACNA1A-235ENST00000637004 EXOC6BQ9Y2D4 811 aa18.68■□□□□ 0.58
CACNA1A-235ENST00000637004 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
CACNA1A-235ENST00000637004 FAM177BA6PVY3 158 aa18.67■□□□□ 0.58
CACNA1A-235ENST00000637004 RIOK3O14730 519 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-235ENST00000637004 FEZ1Q99689 392 aa18.67■□□□□ 0.58
CACNA1A-235ENST00000637004 FUCA2Q9BTY2 467 aa18.67■□□□□ 0.58
CACNA1A-235ENST00000637004 STAP2Q9UGK3 403 aa18.67■□□□□ 0.58
CACNA1A-235ENST00000637004 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-235ENST00000637004 CTIFO43310 598 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-235ENST00000637004 HSPA4P34932 840 aa18.66■□□□□ 0.58
CACNA1A-235ENST00000637004 SLC4A10Q6U841 1118 aa18.66■□□□□ 0.58
CACNA1A-235ENST00000637004 STX6O43752 255 aa18.66■□□□□ 0.58
CACNA1A-235ENST00000637004 COG3Q96JB2 828 aa18.66■□□□□ 0.58
CACNA1A-235ENST00000637004 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
CACNA1A-235ENST00000637004 NME9Q86XW9 330 aa18.65■□□□□ 0.58
CACNA1A-235ENST00000637004 AOX1Q06278 1338 aa18.64■□□□□ 0.58
CACNA1A-235ENST00000637004 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
CACNA1A-235ENST00000637004 BBXQ8WY36 941 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-235ENST00000637004 KCNF1Q9H3M0 494 aa18.64■□□□□ 0.57
CACNA1A-235ENST00000637004 PYCARDQ9ULZ3 195 aa18.64■□□□□ 0.57
CACNA1A-235ENST00000637004 TBX22Q9Y458 520 aa18.64■□□□□ 0.57
CACNA1A-235ENST00000637004 F13A1P00488 732 aa18.64■□□□□ 0.57
CACNA1A-235ENST00000637004 NAP1L2Q9ULW6 460 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-235ENST00000637004 SPDYE4A6NLX3 237 aa18.63■□□□□ 0.57
CACNA1A-235ENST00000637004 FIBPO43427 364 aa18.63■□□□□ 0.57
CACNA1A-235ENST00000637004 SYT1P21579 422 aa18.63■□□□□ 0.57
CACNA1A-235ENST00000637004 GIMAP6Q6P9H5 292 aa18.63■□□□□ 0.57
CACNA1A-235ENST00000637004 GNAI3P08754 354 aa18.63■□□□□ 0.57
CACNA1A-235ENST00000637004 CCDC192P0DO97 292 aa18.63■□□□□ 0.57
CACNA1A-235ENST00000637004 SMC3Q9UQE7 1217 aa18.63■□□□□ 0.57
CACNA1A-235ENST00000637004 RRS1Q15050 365 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-235ENST00000637004 LIMCH1Q9UPQ0 1083 aa18.62■□□□□ 0.57
CACNA1A-235ENST00000637004 SYCP1Q15431 976 aa18.62■□□□□ 0.57
CACNA1A-235ENST00000637004 PROSER2Q86WR7 435 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-235ENST00000637004 PTPRUQ92729 1446 aa18.62■□□□□ 0.57
CACNA1A-235ENST00000637004 TAF3Q5VWG9 929 aa18.61■□□□□ 0.57
CACNA1A-235ENST00000637004 MCM10Q7L590 875 aa18.61■□□□□ 0.57
CACNA1A-235ENST00000637004 F6X3S4 739 aa18.61■□□□□ 0.57
CACNA1A-235ENST00000637004 U2AF2P26368 475 aaKnown RBP eCLIP18.61■□□□□ 0.57
CACNA1A-235ENST00000637004 ATP8B2P98198 1209 aa18.61■□□□□ 0.57
CACNA1A-235ENST00000637004 TPRNQ4KMQ1 711 aa18.61■□□□□ 0.57
CACNA1A-235ENST00000637004 SULT6B1Q6IMI4 303 aa18.6■□□□□ 0.57
CACNA1A-235ENST00000637004 OGFRQ9NZT2 677 aa18.6■□□□□ 0.57
CACNA1A-235ENST00000637004 ALKQ9UM73 1620 aa18.6■□□□□ 0.57
CACNA1A-235ENST00000637004 GTF2E1P29083 439 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-235ENST00000637004 SPC24Q8NBT2 197 aa18.6■□□□□ 0.57
CACNA1A-235ENST00000637004 TTC14Q96N46 770 aa18.59■□□□□ 0.57
CACNA1A-235ENST00000637004 RAD50Q92878 1312 aa18.59■□□□□ 0.57
CACNA1A-235ENST00000637004 AP5Z1O43299 807 aa18.59■□□□□ 0.57
CACNA1A-235ENST00000637004 ZRANB1Q9UGI0 708 aa18.59■□□□□ 0.57
CACNA1A-235ENST00000637004 UNC5CLQ8IV45 518 aa18.59■□□□□ 0.57
CACNA1A-235ENST00000637004 ARHGEF10O15013 1369 aa18.58■□□□□ 0.57
CACNA1A-235ENST00000637004 TCHHQ07283 1943 aa18.58■□□□□ 0.57
CACNA1A-235ENST00000637004 TUBGCP6Q96RT7 1819 aa18.58■□□□□ 0.57
CACNA1A-235ENST00000637004 AK2P54819 239 aa18.58■□□□□ 0.57
CACNA1A-235ENST00000637004 G2E3Q7L622 706 aa18.58■□□□□ 0.57
CACNA1A-235ENST00000637004 FAM200AQ8TCP9 573 aa18.58■□□□□ 0.57
CACNA1A-235ENST00000637004 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.57
CACNA1A-235ENST00000637004 NRXN3Q9Y4C0 1643 aa18.58■□□□□ 0.57
CACNA1A-235ENST00000637004 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.56
CACNA1A-235ENST00000637004 SNX14Q9Y5W7 946 aa18.58■□□□□ 0.56
CACNA1A-235ENST00000637004 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
CACNA1A-235ENST00000637004 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
CACNA1A-235ENST00000637004 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
CACNA1A-235ENST00000637004 ROBO2Q9HCK4 1378 aa18.56■□□□□ 0.56
CACNA1A-235ENST00000637004 SMTNL1A8MU46 457 aa18.56■□□□□ 0.56
CACNA1A-235ENST00000637004 RUFY3Q7L099 469 aa18.56■□□□□ 0.56
CACNA1A-235ENST00000637004 SGSM2O43147 1006 aa18.56■□□□□ 0.56
CACNA1A-235ENST00000637004 EIF4A2Q14240 407 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-235ENST00000637004 DNM1Q05193 864 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-235ENST00000637004 NCBP1Q09161 790 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-235ENST00000637004 CRB1P82279 1406 aa18.55■□□□□ 0.56
CACNA1A-235ENST00000637004 PTGS1P23219 599 aa18.55■□□□□ 0.56
CACNA1A-235ENST00000637004 GABPB1Q06547 395 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-235ENST00000637004 IL25Q9H293 177 aa18.55■□□□□ 0.56
CACNA1A-235ENST00000637004 CGNQ9P2M7 1197 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-235ENST00000637004 PAXBP1Q9Y5B6 917 aa18.55■□□□□ 0.56
CACNA1A-235ENST00000637004 WASLO00401 505 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-235ENST00000637004 MAP3K11Q16584 847 aa18.54■□□□□ 0.56
CACNA1A-235ENST00000637004 TSPYL4Q9UJ04 414 aa18.54■□□□□ 0.56
CACNA1A-235ENST00000637004 MTMR6Q9Y217 621 aa18.54■□□□□ 0.56
CACNA1A-235ENST00000637004 ZSCAN31Q96LW9 406 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-235ENST00000637004 ZNF771Q7L3S4 317 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-235ENST00000637004 SH2B1Q9NRF2 756 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-235ENST00000637004 GJB2P29033 226 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms