RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 MTHFSDQ2M296 383 aaKnown RBP2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 MORC1Q86VD1 984 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 IFNL2Q8IZJ0 200 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 IL17REQ8NFR9 667 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 CCER1Q8TC90 406 aaPredicted RBP2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 PHACTR3Q96KR7 559 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 AK7Q96M32 723 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 NMRK2Q9NPI5 230 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 TMOD3Q9NYL9 352 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 SPG7Q9UQ90 795 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 CDK5RAP2Q96SN8 1893 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 CNTNAP4Q9C0A0 1308 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 AK9Q5TCS8 1911 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 ERVV-2B6SEH9 535 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 POLRMTO00411 1230 aaKnown RBP2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 RNMTO43148 476 aaKnown RBP2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 RPS6KA4O75676 772 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 A1BGP04217 495 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 CYP19A1P11511 503 aaPredicted RBP2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 SSFA2P28290 1259 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 TM4SF1P30408 202 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 CABP4P57796 275 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 RASSF7Q02833 373 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 DCTN1Q14203 1278 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 PLEKHO1Q53GL0 409 aaPredicted RBP2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 USPL1Q5W0Q7 1092 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 OLFM4Q6UX06 510 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 SMARCC1Q92922 1105 aaPredicted RBP2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 MIS18AQ9NYP9 233 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 BCS1LQ9Y276 419 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZBTB1Q9Y2K1 713 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 CD2APQ9Y5K6 639 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZSWIM8A7E2V4 1837 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 LAMB1P07942 1786 aa2.21□□□□□ -2.06
SYNGAP1-216ENST00000636640 SOS1Q07889 1333 aaPredicted RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 USP42Q9H9J4 1324 aaKnown RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 OTOFQ9HC10 1997 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 DCAF8L1A6NGE4 600 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 POTECB2RU33 542 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 NBPF26B4DH59 902 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 GIGYF1O75420 1035 aaPredicted RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 FCHSD2O94868 740 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 CANXP27824 592 aaKnown RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 NFIXQ14938 502 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 CDCA8Q53HL2 280 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 AKAP4Q5JQC9 854 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 TRAPPC3LQ5T215 181 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 RC3H1Q5TC82 1133 aaKnown RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 TBC1D9BQ66K14 1250 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 NBPF10Q6P3W6 841 aaKnown RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 BICDL1Q6ZP65 573 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 ARHGAP27Q6ZUM4 889 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 NBPF15Q8N660 670 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 DNAJC5GQ8N7S2 189 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZNF428Q96B54 188 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZNF496Q96IT1 587 aaPredicted RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 DCAF5Q96JK2 942 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 THUMPD2Q9BTF0 503 aaKnown RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 RSPH6AQ9H0K4 717 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 SLC52A2Q9HAB3 445 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 RRAGCQ9HB90 399 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 CCDC87Q9NVE4 849 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZNF219Q9P2Y4 722 aaPredicted RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 TIMELESSQ9UNS1 1208 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 TBC1D2BQ9UPU7 963 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 RTCBQ9Y3I0 505 aaKnown RBP2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 USP16Q9Y5T5 823 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 COL15A1P39059 1388 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 MGAMO43451 1857 aa2.2□□□□□ -2.06
SYNGAP1-216ENST00000636640 CLSPNQ9HAW4 1339 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 DUOX1Q9NRD9 1551 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 DOCK3Q8IZD9 2030 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 FAM177BA6PVY3 158 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 NFKBIEO00221 500 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 U2SURPO15042 1029 aaKnown RBP2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 GRIN3BO60391 1043 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 DIAPH1O60610 1272 aaKnown RBP2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 CAMTA2O94983 1202 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 SERPINB2P05120 415 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 POTEIP0CG38 1075 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 POTEJP0CG39 1038 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 PPP2R1AP30153 589 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 PRKAR2BP31323 418 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 RFC4P35249 363 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 EIF5P55010 431 aaKnown RBP2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 FMR1Q06787 632 aaKnown RBP eCLIP2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 C1orf141Q5JVX7 400 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 C9orf131Q5VYM1 1079 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 PRR5LQ6MZQ0 368 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 MCM10Q7L590 875 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 NLGN1Q8N2Q7 840 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 FLAD1Q8NFF5 587 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 GPBP1L1Q9HC44 474 aaPredicted RBP2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 RNF181Q9P0P0 153 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 NARFQ9UHQ1 456 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 KNSTRNQ9Y448 316 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 PARP3Q9Y6F1 533 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 CEMIPQ8WUJ3 1361 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 HEG1Q9ULI3 1381 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms