RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 AK7Q96M32 723 aa9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 CCDC83Q8IWF9 413 aa9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 CCP110O43303 1012 aa9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 SYCP1Q15431 976 aa9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 HMGB1P09429 215 aaKnown RBP9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 ZNF76P36508 570 aa9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 LDHAL6AQ6ZMR3 332 aa9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 CDC5LQ99459 802 aaKnown RBP9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 BMP2KQ9NSY1 1161 aaPredicted RBP9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 SHANK2Q9UPX8 1470 aa9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 PPP1R42Q7Z4L9 355 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 EVI5LQ96CN4 794 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 ECHDC1Q9NTX5 307 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 ZNHIT6Q9NWK9 470 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 ZNF213O14771 459 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 SPC24Q8NBT2 197 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 ANKRD13DQ6ZTN6 518 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 CEP131Q9UPN4 1083 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 ABCC2Q92887 1545 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 SSBP05455 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 SEC63Q9UGP8 760 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 CCDC196A0A1B0GTZ2 297 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 NUP62CLQ9H1M0 184 aa9.09□□□□□ -0.95
SMARCA2-252ENST00000636559 SLF2Q8IX21 1173 aa9.09□□□□□ -0.96
SMARCA2-252ENST00000636559 ACBD3Q9H3P7 528 aa9.09□□□□□ -0.96
SMARCA2-252ENST00000636559 ANXA1P04083 346 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 TEX35Q5T0J7 233 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 PPFIBP1Q86W92 1011 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 SH2B1Q9NRF2 756 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 TOM1O60784 492 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 EIF4A2Q14240 407 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 DHX8Q14562 1220 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 CEP57L1Q8IYX8 460 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 ABCC1P33527 1531 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 MCM4P33991 863 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 TTF1Q15361 905 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 AKAP4Q5JQC9 854 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 SKAP1Q86WV1 359 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 IQCA1Q86XH1 822 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 ARHGAP45Q92619 1136 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 PUS7Q96PZ0 661 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 TANGO6Q9C0B7 1094 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 RANBP6O60518 1105 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 DDX46Q7L014 1031 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 ZNF444Q8N0Y2 327 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 BCL11BQ9C0K0 894 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 RNF41Q9H4P4 317 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 ZMYM3Q14202 1370 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 GOLIM4O00461 696 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 RFC4P35249 363 aa9.08□□□□□ -0.96
SMARCA2-252ENST00000636559 C6orf229H3BNL8 230 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 CTCFLQ8NI51 663 aaPredicted RBP9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 PBRM1Q86U86 1689 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 CDR1P51861 262 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 POLKQ9UBT6 870 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 ZRANB1Q9UGI0 708 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 FERMT3Q86UX7 667 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 C19orf44Q9H6X5 657 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 CBFA2T2O43439 604 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 SLC12A7Q9Y666 1083 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 UBAP1LF5GYI3 381 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 FLT4P35916 1363 aa9.07□□□□□ -0.96
SMARCA2-252ENST00000636559 NPATQ14207 1427 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 RDXP35241 583 aaKnown RBP9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 XAGE3Q8WTP9 111 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 PLEKHH1Q9ULM0 1364 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 HSP90B2PQ58FF3 399 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 BMP2KLQ5H9B9 411 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 C8orf76Q96K31 380 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 LUC7LQ9NQ29 371 aaKnown RBP9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 ZNF219Q9P2Y4 722 aaPredicted RBP9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 LIMCH1Q9UPQ0 1083 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 SLC39A6Q13433 755 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 PDCL3Q9H2J4 239 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 DEF6Q9H4E7 631 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 SNRKQ9NRH2 765 aa9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 POLR3AO14802 1390 aaPredicted RBP9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 IFIT3O14879 490 aaKnown RBP9.06□□□□□ -0.96
SMARCA2-252ENST00000636559 PARD3Q8TEW0 1356 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 CCDC152Q4G0S7 254 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 COPS6Q7L5N1 327 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 GRPEL1Q9HAV7 217 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 NBPF6Q5VWK0 638 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 TBC1D9Q6ZT07 1266 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 ZNF771Q7L3S4 317 aaPredicted RBP9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 NBPF5PQ86XG9 351 aaPredicted RBP9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 CABLES1Q8TDN4 633 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 NBPF4Q96M43 638 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 MYO6Q9UM54 1294 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 DNMT1P26358 1616 aaKnown RBP9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 TRPM2O94759 1503 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 ATP6V1AP38606 617 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 HMGN5P82970 282 aaKnown RBP9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 LRRC59Q96AG4 307 aaKnown RBP9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 ACSBG1Q96GR2 724 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 NCKAP5LQ9HCH0 1330 aa9.05□□□□□ -0.96
SMARCA2-252ENST00000636559 SETQ01105 290 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms